FFCP PHASE1:Mm9::chr2:25322829..25322837,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:25322829..25322837,+|id=chr2:25322829..25322837,+|ontology_enrichment_celltype=CL:0000221!4.26e-08!44;CL:0000133!4.26e-08!44;CL:0002319!5.92e-08!43;CL:0000117!2.88e-07!23;CL:0000337!2.88e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-07,23;CL:0000337,1.32e-07,23;CL:0002614,2.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.48e-27!73;UBERON:0005743!2.48e-27!73;UBERON:0000073!8.03e-27!75;UBERON:0001016!8.03e-27!75;UBERON:0000033!3.46e-24!63;UBERON:0001049!5.94e-24!52;UBERON:0005068!5.94e-24!52;UBERON:0006241!5.94e-24!52;UBERON:0007135!5.94e-24!52;UBERON:0000955!1.00e-23!50;UBERON:0006238!1.00e-23!50;UBERON:0002616!6.87e-23!49;UBERON:0004121!3.81e-20!102;UBERON:0000924!3.81e-20!102;UBERON:0006601!3.81e-20!102;UBERON:0002346!3.34e-19!71;UBERON:0003075!3.34e-19!71;UBERON:0007284!3.34e-19!71;UBERON:0003056!1.59e-17!49;UBERON:0003080!6.72e-16!40;UBERON:0002780!3.76e-15!39;UBERON:0001890!3.76e-15!39;UBERON:0006240!3.76e-15!39;UBERON:0002020!8.38e-13!34;UBERON:0007811!1.46e-12!86;UBERON:0002791!3.71e-10!29;UBERON:0003528!3.71e-10!29;UBERON:0001893!3.71e-10!29;UBERON:0000153!5.14e-10!94;UBERON:0002021!3.95e-09!10;UBERON:0000411!3.95e-09!10;UBERON:0001950!3.95e-09!10;UBERON:0003076!6.28e-09!12;UBERON:0003057!6.28e-09!12;UBERON:0000025!4.93e-08!114;UBERON:0004111!4.20e-07!122;UBERON:0000956!6.34e-07!21;UBERON:0001869!6.34e-07!21;UBERON:0000203!6.34e-07!21;UBERON:0002298!9.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-36,54;UBERON:0001017,2.26e-33,73;UBERON:0001049,2.87e-32,52;UBERON:0005068,2.87e-32,52;UBERON:0006241,2.87e-32,52;UBERON:0007135,2.87e-32,52;UBERON:0001016,3.32e-32,75;UBERON:0000955,6.02e-30,47;UBERON:0006238,6.02e-30,47;UBERON:0002616,1.80e-28,46;UBERON:0002346,7.30e-28,64;UBERON:0003075,7.30e-28,64;UBERON:0007284,7.30e-28,64;UBERON:0004121,4.91e-26,95;UBERON:0000924,4.91e-26,95;UBERON:0006601,4.91e-26,95;UBERON:0010371,2.87e-23,73;UBERON:0003080,3.06e-22,40;UBERON:0002780,6.81e-21,39;UBERON:0001890,6.81e-21,39;UBERON:0006240,6.81e-21,39;UBERON:0003056,5.39e-20,49;UBERON:0002020,1.23e-16,34;UBERON:0002021,1.39e-16,10;UBERON:0000411,1.39e-16,10;UBERON:0001950,1.39e-16,10;UBERON:0010314,1.53e-16,92;UBERON:0003528,2.22e-14,29;UBERON:0002791,2.22e-14,29;UBERON:0001893,2.22e-14,29;UBERON:0000025,9.76e-12,114;UBERON:0002619,1.13e-10,17;UBERON:0003076,2.11e-10,12;UBERON:0003057,2.11e-10,12;UBERON:0004111,2.23e-10,122;UBERON:0000956,6.01e-10,21;UBERON:0001869,6.01e-10,21;UBERON:0000203,6.01e-10,21;UBERON:0002950,9.24e-09,4;UBERON:0001891,9.24e-09,4;UBERON:0009616,9.24e-09,4;UBERON:0010286,9.24e-09,4;UBERON:0001894,1.47e-07,10;UBERON:0006222,1.47e-07,10;UBERON:0004733,1.65e-07,6;UBERON:0004732,1.65e-07,6;UBERON:0002028,1.65e-07,6;UBERON:0007277,1.65e-07,6;UBERON:0002038,2.85e-07,3;UBERON:0009663,2.85e-07,3;UBERON:0009661,2.85e-07,3;UBERON:0000125,2.85e-07,3;UBERON:0002308,2.85e-07,3;UBERON:0011216,9.10e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.794327609607082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82391344348039,0.65407546914134,0,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0,0.528990979272033,2.53532561402472,0.338844532069132,0.889294796111139,0,0.988866362566974,0,11.9840044207362,17.6740420447915,0.103689612308478,0.135005938331691,0,5.42736870367227,5.52171352379034,0,0,0,35.2370819198044,15.5778552463929,4.91540906419979,0.263772575460388,0.182975287204819,1.04182674111352,51.0904888172527,128.309875087223,74.1071501717529,1.17851434189467,0.854230084794618,0.186399445825301,0.151452386666368,0,0,0,1.3599426674155,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,3.97948742945565,0,0,0,0,5.09288173976397,3.20250421973039,0,7.12679712788333,6.13717097592793,6.2336413367868,4.70499662896497,0.101839363850316,0,7.32895999457657,0.631325567659422,0,0,0.360124259610698,0.60281927134286,0.204109497453984,0.384341160854549,1.3118241438362,1.81092359517311,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,0.329119699826961,0.32833492815819,0,0,0,0.402619256281115,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,4.45404409050372,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,5.46246237917072,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0.776152102696527,1.07168517515796,2.83744373827638,5.52943334566419,2.13913726782757,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:25322829..25322837,+ | |||
|id=chr2:25322829..25322837,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.26e-08!44;CL:0000133!4.26e-08!44;CL:0002319!5.92e-08!43;CL:0000117!2.88e-07!23;CL:0000337!2.88e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-07,23;CL:0000337,1.32e-07,23;CL:0002614,2.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-27!73;UBERON:0005743!2.48e-27!73;UBERON:0000073!8.03e-27!75;UBERON:0001016!8.03e-27!75;UBERON:0000033!3.46e-24!63;UBERON:0001049!5.94e-24!52;UBERON:0005068!5.94e-24!52;UBERON:0006241!5.94e-24!52;UBERON:0007135!5.94e-24!52;UBERON:0000955!1.00e-23!50;UBERON:0006238!1.00e-23!50;UBERON:0002616!6.87e-23!49;UBERON:0004121!3.81e-20!102;UBERON:0000924!3.81e-20!102;UBERON:0006601!3.81e-20!102;UBERON:0002346!3.34e-19!71;UBERON:0003075!3.34e-19!71;UBERON:0007284!3.34e-19!71;UBERON:0003056!1.59e-17!49;UBERON:0003080!6.72e-16!40;UBERON:0002780!3.76e-15!39;UBERON:0001890!3.76e-15!39;UBERON:0006240!3.76e-15!39;UBERON:0002020!8.38e-13!34;UBERON:0007811!1.46e-12!86;UBERON:0002791!3.71e-10!29;UBERON:0003528!3.71e-10!29;UBERON:0001893!3.71e-10!29;UBERON:0000153!5.14e-10!94;UBERON:0002021!3.95e-09!10;UBERON:0000411!3.95e-09!10;UBERON:0001950!3.95e-09!10;UBERON:0003076!6.28e-09!12;UBERON:0003057!6.28e-09!12;UBERON:0000025!4.93e-08!114;UBERON:0004111!4.20e-07!122;UBERON:0000956!6.34e-07!21;UBERON:0001869!6.34e-07!21;UBERON:0000203!6.34e-07!21;UBERON:0002298!9.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-36,54;UBERON:0001017,2.26e-33,73;UBERON:0001049,2.87e-32,52;UBERON:0005068,2.87e-32,52;UBERON:0006241,2.87e-32,52;UBERON:0007135,2.87e-32,52;UBERON:0001016,3.32e-32,75;UBERON:0000955,6.02e-30,47;UBERON:0006238,6.02e-30,47;UBERON:0002616,1.80e-28,46;UBERON:0002346,7.30e-28,64;UBERON:0003075,7.30e-28,64;UBERON:0007284,7.30e-28,64;UBERON:0004121,4.91e-26,95;UBERON:0000924,4.91e-26,95;UBERON:0006601,4.91e-26,95;UBERON:0010371,2.87e-23,73;UBERON:0003080,3.06e-22,40;UBERON:0002780,6.81e-21,39;UBERON:0001890,6.81e-21,39;UBERON:0006240,6.81e-21,39;UBERON:0003056,5.39e-20,49;UBERON:0002020,1.23e-16,34;UBERON:0002021,1.39e-16,10;UBERON:0000411,1.39e-16,10;UBERON:0001950,1.39e-16,10;UBERON:0010314,1.53e-16,92;UBERON:0003528,2.22e-14,29;UBERON:0002791,2.22e-14,29;UBERON:0001893,2.22e-14,29;UBERON:0000025,9.76e-12,114;UBERON:0002619,1.13e-10,17;UBERON:0003076,2.11e-10,12;UBERON:0003057,2.11e-10,12;UBERON:0004111,2.23e-10,122;UBERON:0000956,6.01e-10,21;UBERON:0001869,6.01e-10,21;UBERON:0000203,6.01e-10,21;UBERON:0002950,9.24e-09,4;UBERON:0001891,9.24e-09,4;UBERON:0009616,9.24e-09,4;UBERON:0010286,9.24e-09,4;UBERON:0001894,1.47e-07,10;UBERON:0006222,1.47e-07,10;UBERON:0004733,1.65e-07,6;UBERON:0004732,1.65e-07,6;UBERON:0002028,1.65e-07,6;UBERON:0007277,1.65e-07,6;UBERON:0002038,2.85e-07,3;UBERON:0009663,2.85e-07,3;UBERON:0009661,2.85e-07,3;UBERON:0000125,2.85e-07,3;UBERON:0002308,2.85e-07,3;UBERON:0011216,9.10e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0.794327609607082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82391344348039,0.65407546914134,0,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0,0.528990979272033,2.53532561402472,0.338844532069132,0.889294796111139,0,0.988866362566974,0,11.9840044207362,17.6740420447915,0.103689612308478,0.135005938331691,0,5.42736870367227,5.52171352379034,0,0,0,35.2370819198044,15.5778552463929,4.91540906419979,0.263772575460388,0.182975287204819,1.04182674111352,51.0904888172527,128.309875087223,74.1071501717529,1.17851434189467,0.854230084794618,0.186399445825301,0.151452386666368,0,0,0,1.3599426674155,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,3.97948742945565,0,0,0,0,5.09288173976397,3.20250421973039,0,7.12679712788333,6.13717097592793,6.2336413367868,4.70499662896497,0.101839363850316,0,7.32895999457657,0.631325567659422,0,0,0.360124259610698,0.60281927134286,0.204109497453984,0.384341160854549,1.3118241438362,1.81092359517311,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,0.329119699826961,0.32833492815819,0,0,0,0.402619256281115,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,4.45404409050372,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,5.46246237917072,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0.776152102696527,1.07168517515796,2.83744373827638,5.52943334566419,2.13913726782757,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,1.49516546043979,1.98550188548517,0.583353565032143,3.22899558694328,1.18269287843545,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,1.71868654031819,10.4830441229649,12.3314853558716,6.0431511791176,6.75022500231806,5.85417564191487,4.98456649882625,4.65984280576638,0,0,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0,0.280924522409647,0.704276676453562,0.287177344778066,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.73171189149109,0.263069711437843,0,0,0.355905054372522,0.689531376628944,1.22769312950907,0.619747364743864,0.192906610981141,1.24905288968973,0.467863216890817,0.644613162144895,0,0.882365676478062,0 | |||
|short_description=p@chr2:25322829..25322837,+ | |||
}} |
Revision as of 23:26, 13 September 2013
Short description: | p@chr2:25322829..25322837, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:25322829..25322837, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.32e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-07 | 23 |
neuron of the substantia nigra | 2.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.