FFCP PHASE1:Mm9::chr2:20890879..20890909,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71435|HGNC=|MCL_coexpression_id=15|UniProt=Q6DFV3|association_with_transcript=-371bp_to_ENSMUST00000114594_5end|description=CAGE_peak_6_at_Arhgap21_5end|id=chr2:20890879..20890909,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.64e-07,33;UBERON:0003914,6.69e-07,47|phase1_expression=0.160148847104794,1.04692622291808,0,1.20985684522732,0,0.503637815735669,0.934450562382103,0.387369970324729,0.985521055061667,0.70219357896598,0,0,0,0,5.99597571268193,4.85940641735582,3.49780939064073,0,0.274228867211478,1.69755860719212,0.17008658030214,0.496454756004426,0.261199789138935,0.47997726838022,0.91763712426868,0,0.430761996159075,1.07735616342945,0.570070258369122,0.756090389279792,1.33038306393183,3.81018404075779,4.92051830067656,0,1.44425809875637,0.664938581433969,0.612508068787107,0.837063261473815,0,0,1.17646297606203,1.36609096991689,0,0,0.202753862439029,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0.919218786610021,0,0.638436690425939,0.307213066512487,0.923204014111357,0.548925861614458,0,1.3959149950069,0.56276261003168,0.763991238884051,0.589257170947335,0.427115042397309,1.1183966749518,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0,0.741584903203122,0.144599356919912,3.5384422077995,0.808834249737046,2.65009822152472,3.39412677194655,1.86391761218122,0.878342391034642,1.8850203613211,1.02182822083437,3.71426885968353,1.79970819298022,2.03312363316904,1.04853447583376,0,0.879580464790051,0.347648640384553,0.767146371990992,0.41557608911912,0.486723789203273,0.509196819251581,1.36847667671102,0,0.420883711772948,0.260240885925407,0.689706313300419,0.360124259610698,0.60281927134286,0.95251098811859,1.2811372028485,0.749613796477831,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0.772043721344145,0.852490498186778,1.03562886267751,0.469052119962192,1.08037236876609,1.65721314909647,0.787056926989615,1.23413690309903,0.930135779001631,1.07309360559848,2.10177616260905,1.81015834904829,1.64167464079095,2.10778904819225,2.04679982395465,1.3173006917463,2.01309628140558,0.420579897128254,0.617427674275707,0.660837565967596,0.793351699990633,0.213288250535234,0.696710015581316,0.644337306610467,0.201683524623343,0.667134131534611,1.52180500890047,0.474529061544512,0.329397909448022,0,1.1937388322469,0.38992817423824,0,1.51296634912286,0,0,0.342745537829186,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0,0,0,0.296452627087149,7.17433954579204,7.27268281918851,7.19558759631532,11.5630269191447,8.20002343158217,7.89340140522401,4.31544206176216,3.72911021582581,2.74561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,1.10374698521893,0,0.586058432961016,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0.485561272309963,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0.21183207086382,0.220528398054962,0.8244312647074,0.645857706783622,0.301564624640779,0.238744688006273,0.328281799490123,0.582961673259701,0.370850604021019,6.4930934703184,0.82554747185289,2.22233432843654,7.72310673719233,8.61173634642459,8.69357058184786,8.32894306969891,7.69732987780119,7.46279858543889,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0.655087691238533,0.404593039154462,0.495920734352016,0.523511883968059,1.03691978633434,0.621339313086926,0,0.149516546043979,0.496375471371293,0.777804753376191,0.129159823477731,0.506868376472335,1.05621514781179,0.911430693907651,0.629156066554265,0.241584120826006,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.906921534460845,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.375364950902364,0.36630324853453,1.07184189539533,0,1.12950368523413,0,0.572895513439397,0.68741272937475,1.37016503954128,0,0,0.45032120322422,0.906284817968409,0,0.31136204275253,0,0.682934423016537,1.70174701947806,3.77303692730368,0.919217542250071,0.888986911206461,0.412070114477788,0.64183841918363,1.76888048234658,1.2673964994512,1.13175804831646,1.31098110457835,0.768301828858431,0.631790158511746,0.476293691283074,1.0429589335037,0,0.412085900803307,2.06078488188156,1.71434626192708,0.70990322463735,1.1921809497366,0.581385666529314,0.564656282491984,0.761531471025089,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,1.0835493061312,0.409231043169689,0.77468420592983,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,1.32354851471709,1.39120701372253|short_description=p6@Arhgap21}} | ||
|EntrezGene=71435 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=Q6DFV3 | |||
|association_with_transcript=-371bp_to_ENSMUST00000114594_5end | |||
|description=CAGE_peak_6_at_Arhgap21_5end | |||
|id=chr2:20890879..20890909,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.64e-07,33;UBERON:0003914,6.69e-07,47 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0,1.20985684522732,0,0.503637815735669,0.934450562382103,0.387369970324729,0.985521055061667,0.70219357896598,0,0,0,0,5.99597571268193,4.85940641735582,3.49780939064073,0,0.274228867211478,1.69755860719212,0.17008658030214,0.496454756004426,0.261199789138935,0.47997726838022,0.91763712426868,0,0.430761996159075,1.07735616342945,0.570070258369122,0.756090389279792,1.33038306393183,3.81018404075779,4.92051830067656,0,1.44425809875637,0.664938581433969,0.612508068787107,0.837063261473815,0,0,1.17646297606203,1.36609096991689,0,0,0.202753862439029,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0.919218786610021,0,0.638436690425939,0.307213066512487,0.923204014111357,0.548925861614458,0,1.3959149950069,0.56276261003168,0.763991238884051,0.589257170947335,0.427115042397309,1.1183966749518,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0,0.741584903203122,0.144599356919912,3.5384422077995,0.808834249737046,2.65009822152472,3.39412677194655,1.86391761218122,0.878342391034642,1.8850203613211,1.02182822083437,3.71426885968353,1.79970819298022,2.03312363316904,1.04853447583376,0,0.879580464790051,0.347648640384553,0.767146371990992,0.41557608911912,0.486723789203273,0.509196819251581,1.36847667671102,0,0.420883711772948,0.260240885925407,0.689706313300419,0.360124259610698,0.60281927134286,0.95251098811859,1.2811372028485,0.749613796477831,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0.772043721344145,0.852490498186778,1.03562886267751,0.469052119962192,1.08037236876609,1.65721314909647,0.787056926989615,1.23413690309903,0.930135779001631,1.07309360559848,2.10177616260905,1.81015834904829,1.64167464079095,2.10778904819225,2.04679982395465,1.3173006917463,2.01309628140558,0.420579897128254,0.617427674275707,0.660837565967596,0.793351699990633,0.213288250535234,0.696710015581316,0.644337306610467,0.201683524623343,0.667134131534611,1.52180500890047,0.474529061544512,0.329397909448022,0,1.1937388322469,0.38992817423824,0,1.51296634912286,0,0,0.342745537829186,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0,0,0,0.296452627087149,7.17433954579204,7.27268281918851,7.19558759631532,11.5630269191447,8.20002343158217,7.89340140522401,4.31544206176216,3.72911021582581,2.74561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,1.10374698521893,0,0.586058432961016,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,0.321321316421807,0.283880170416537,0.178065603667255,0.651547837414304,0,0,0.485561272309963,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0.21183207086382,0.220528398054962,0.8244312647074,0.645857706783622,0.301564624640779,0.238744688006273,0.328281799490123,0.582961673259701,0.370850604021019,6.4930934703184,0.82554747185289,2.22233432843654,7.72310673719233,8.61173634642459,8.69357058184786,8.32894306969891,7.69732987780119,7.46279858543889,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0.655087691238533,0.404593039154462,0.495920734352016,0.523511883968059,1.03691978633434,0.621339313086926,0,0.149516546043979,0.496375471371293,0.777804753376191,0.129159823477731,0.506868376472335,1.05621514781179,0.911430693907651,0.629156066554265,0.241584120826006,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.906921534460845,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.375364950902364,0.36630324853453,1.07184189539533,0,1.12950368523413,0,0.572895513439397,0.68741272937475,1.37016503954128,0,0,0.45032120322422,0.906284817968409,0,0.31136204275253,0,0.682934423016537,1.70174701947806,3.77303692730368,0.919217542250071,0.888986911206461,0.412070114477788,0.64183841918363,1.76888048234658,1.2673964994512,1.13175804831646,1.31098110457835,0.768301828858431,0.631790158511746,0.476293691283074,1.0429589335037,0,0.412085900803307,2.06078488188156,1.71434626192708,0.70990322463735,1.1921809497366,0.581385666529314,0.564656282491984,0.761531471025089,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,1.0835493061312,0.409231043169689,0.77468420592983,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,1.32354851471709,1.39120701372253 | |||
|short_description=p6@Arhgap21 | |||
}} | |||
Revision as of 23:20, 13 September 2013
| Short description: | p6@Arhgap21 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Arhgap21_5end |
| Coexpression cluster: | MCL_coexpression_mm9:15 |
| Association with transcript: | -371bp_to_ENSMUST00000114594_5end |
| EntrezGene: | Arhgap21 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 3.64e-07 | 33 |
| epithelial tube | 6.69e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
