FFCP PHASE1:Hg19::chr7:128470924..128470977,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2318|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3756|TSSclassifier=W|UniProt=Q14315|association_with_transcript=250bp_to_AJ012737_5end|description=CAGE_peak_4_at_FLNC_5end|id=chr7:128470924..128470977,+|ontology_enrichment_celltype=CL:0000055!1.01e-24!180;CL:0000222!1.14e-24!119;CL:0000057!4.04e-16!75;CL:0000183!1.08e-15!59;CL:0000680!4.36e-15!57;CL:0000056!4.36e-15!57;CL:0000355!4.36e-15!57;CL:0000187!9.89e-14!54;CL:0000393!1.73e-13!60;CL:0000211!1.73e-13!60;CL:0000192!1.34e-11!42;CL:0000514!1.34e-11!42;CL:0000213!1.48e-10!57;CL:0000215!1.48e-10!57;CL:0000359!6.11e-10!32;CL:0000220!4.42e-09!246;CL:0002321!6.41e-09!248;CL:0002620!3.69e-07!23;CL:0002078!6.21e-07!44|ontology_enrichment_celltype_v019=CL:0000359;5.07e-11;32!CL:0000192;3.09e-09;43!CL:0000187;1.82e-07;55!CL:0002539;5.81e-07;10|ontology_enrichment_celltype_v019_2=CL:0000222,4.78e-20,121;CL:0000680,2.76e-15,58;CL:0000056,2.76e-15,58;CL:0000355,2.76e-15,58;CL:0000187,2.67e-13,55;CL:0000359,4.82e-12,32;CL:0000192,2.56e-11,43;CL:0000514,2.56e-11,43;CL:0000393,4.40e-11,61;CL:0000211,4.40e-11,61;CL:0000057,5.51e-10,76;CL:0002539,3.33e-07,10;CL:0000213,5.94e-07,58;CL:0000215,5.94e-07,58|ontology_enrichment_development_v019=CL:0000514;3.09e-09;43!CL:0000355;1.88e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!2.21e-21!79;UBERON:0007798!2.21e-21!79;UBERON:0004872!2.66e-21!84;UBERON:0000055!6.26e-20!69;UBERON:0001981!1.23e-19!60;UBERON:0007500!1.23e-19!60;UBERON:0004537!1.23e-19!60;UBERON:0006965!1.23e-19!60;UBERON:0004290!3.05e-18!70;UBERON:0002385!4.62e-18!63;UBERON:0001015!4.62e-18!63;UBERON:0000383!4.62e-18!63;UBERON:0001009!4.75e-18!113;UBERON:0001134!1.01e-17!61;UBERON:0002036!1.01e-17!61;UBERON:0003082!1.01e-17!61;UBERON:0000914!2.45e-17!83;UBERON:0002329!2.45e-17!83;UBERON:0003077!2.45e-17!83;UBERON:0003059!2.45e-17!83;UBERON:0007282!2.45e-17!83;UBERON:0009618!2.45e-17!83;UBERON:0007285!2.45e-17!83;UBERON:0005256!4.56e-17!143;UBERON:0004535!8.87e-17!110;UBERON:0001637!7.31e-16!42;UBERON:0003509!7.31e-16!42;UBERON:0004572!7.31e-16!42;UBERON:0003914!7.56e-16!118;UBERON:0000486!1.48e-15!82;UBERON:0000490!1.06e-13!138;UBERON:0004573!1.11e-11!33;UBERON:0004571!1.11e-11!33;UBERON:0002100!4.68e-10!216;UBERON:0000119!1.03e-09!312;UBERON:0000483!2.99e-09!309;UBERON:0000468!1.68e-08!659;UBERON:0000947!3.39e-08!21;UBERON:0010191!3.39e-08!21;UBERON:0007100!8.00e-08!27;UBERON:0000475!1.51e-07!365;UBERON:0000477!1.85e-07!286;UBERON:0003103!3.96e-07!69;UBERON:0006914!6.35e-07!25;UBERON:0003104!6.35e-07!238;UBERON:0009142!6.35e-07!238|ontology_enrichment_uberon_v019=UBERON:0002385;3.49e-15;31!UBERON:0001015;3.49e-15;31!UBERON:0000383;3.49e-15;31!UBERON:0001637;5.10e-14;42!UBERON:0003509;5.10e-14;42!UBERON:0004572;5.10e-14;42!UBERON:0004573;1.52e-12;33!UBERON:0004571;1.52e-12;33!UBERON:0001134;1.55e-12;16!UBERON:0002036;1.55e-12;16!UBERON:0007500;2.95e-12;56!UBERON:0001981;2.95e-12;56!UBERON:0004537;2.95e-12;56!UBERON:0000947;8.28e-10;21!UBERON:0010191;8.28e-10;21!UBERON:0000055;1.04e-08;65!UBERON:0003914;1.59e-07;74!UBERON:0004237;5.81e-07;10!UBERON:0004695;5.81e-07;10!UBERON:0002111;5.81e-07;10!UBERON:0004178;5.81e-07;10!UBERON:0002049;6.62e-07;75!UBERON:0007798;6.62e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0007500,1.92e-20,59;UBERON:0001981,1.92e-20,59;UBERON:0004537,1.92e-20,59;UBERON:0006965,1.92e-20,59;UBERON:0002385,3.04e-19,64;UBERON:0001015,3.04e-19,64;UBERON:0000383,3.04e-19,64;UBERON:0001637,3.85e-19,42;UBERON:0003509,3.85e-19,42;UBERON:0004572,3.85e-19,42;UBERON:0001134,3.93e-19,62;UBERON:0002036,3.93e-19,62;UBERON:0003082,3.93e-19,62;UBERON:0002049,1.42e-18,78;UBERON:0007798,1.42e-18,78;UBERON:0000055,2.17e-18,68;UBERON:0002329,2.84e-18,71;UBERON:0003059,2.84e-18,71;UBERON:0007282,2.84e-18,71;UBERON:0004290,2.84e-18,71;UBERON:0009618,2.84e-18,71;UBERON:0003077,7.73e-18,72;UBERON:0007285,7.73e-18,72;UBERON:0004872,8.03e-18,83;UBERON:0007503,8.99e-18,78;UBERON:0007524,2.04e-17,73;UBERON:0000486,9.69e-16,83;UBERON:0001009,3.40e-15,112;UBERON:0000490,1.40e-14,148;UBERON:0004573,2.11e-14,33;UBERON:0004571,2.11e-14,33;UBERON:0005256,2.43e-14,122;UBERON:0004535,4.55e-14,109;UBERON:0000926,1.02e-13,315;UBERON:0004120,1.02e-13,315;UBERON:0006603,1.02e-13,315;UBERON:0003914,2.34e-13,117;UBERON:0003104,6.64e-12,160;UBERON:0009142,6.64e-12,160;UBERON:0000947,2.43e-10,21;UBERON:0010191,2.43e-10,21;UBERON:0002100,9.78e-08,199;UBERON:0004237,3.33e-07,10;UBERON:0004695,3.33e-07,10;UBERON:0002111,3.33e-07,10;UBERON:0004178,3.33e-07,10;UBERON:0000119,7.04e-07,309;UBERON:0006914,7.43e-07,25;UBERON:0000483,8.90e-07,306|phase1_expression=0.908391896352783,1.71280419112787,2.25527046553554,0,0.893922188854576,0,2.53299878168311,2.52687949370732,0,0.737201809504527,2.09340350391728,0.436882744260345,0.791300934685361,0.618831764800233,0.994192127183747,2.01697543935533,0.602694528023977,1.46062018077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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3756 | |||
|TSSclassifier=W | |||
|UniProt=Q14315 | |||
|association_with_transcript=250bp_to_AJ012737_5end | |||
|description=CAGE_peak_4_at_FLNC_5end | |||
|id=chr7:128470924..128470977,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-24!180;CL:0000222!1.14e-24!119;CL:0000057!4.04e-16!75;CL:0000183!1.08e-15!59;CL:0000680!4.36e-15!57;CL:0000056!4.36e-15!57;CL:0000355!4.36e-15!57;CL:0000187!9.89e-14!54;CL:0000393!1.73e-13!60;CL:0000211!1.73e-13!60;CL:0000192!1.34e-11!42;CL:0000514!1.34e-11!42;CL:0000213!1.48e-10!57;CL:0000215!1.48e-10!57;CL:0000359!6.11e-10!32;CL:0000220!4.42e-09!246;CL:0002321!6.41e-09!248;CL:0002620!3.69e-07!23;CL:0002078!6.21e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.07e-11;32!CL:0000192;3.09e-09;43!CL:0000187;1.82e-07;55!CL:0002539;5.81e-07;10 | |||
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|ontology_enrichment_development_v019=CL:0000514;3.09e-09;43!CL:0000355;1.88e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p4@FLNC | |||
}} |
Revision as of 23:07, 13 September 2013
Short description: | p4@FLNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FLNC_5end |
Coexpression cluster: | NA |
Association with transcript: | 250bp_to_AJ012737_5end |
EntrezGene: | FLNC |
HGNC: | 3756 |
UniProt: | Q14315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.78e-20 | 121 |
muscle precursor cell | 2.76e-15 | 58 |
myoblast | 2.76e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.76e-15 | 58 |
muscle cell | 2.67e-13 | 55 |
vascular associated smooth muscle cell | 4.82e-12 | 32 |
smooth muscle cell | 2.56e-11 | 43 |
smooth muscle myoblast | 2.56e-11 | 43 |
electrically responsive cell | 4.40e-11 | 61 |
electrically active cell | 4.40e-11 | 61 |
fibroblast | 5.51e-10 | 76 |
aortic smooth muscle cell | 3.33e-07 | 10 |
lining cell | 5.94e-07 | 58 |
barrier cell | 5.94e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.