FFCP PHASE1:Hg19::chr7:128409190..128409213,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1281|description=CAGE_peak_at_chr7:128409190..128409213,+|id=chr7:128409190..128409213,+|ontology_enrichment_celltype=CL:0000055!5.87e-21!180;CL:0000057!9.35e-14!75;CL:0000680!9.08e-09!57;CL:0000056!9.08e-09!57;CL:0000355!9.08e-09!57;CL:0000222!3.78e-08!119;CL:0000548!4.16e-08!679;CL:0000004!4.16e-08!679;CL:0000255!4.16e-08!679;CL:0000187!6.92e-08!54;CL:0000012!7.84e-08!682;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0002334!4.73e-07!12;CL:0000220!4.86e-07!246;CL:0002620!7.81e-07!23;CL:0002321!7.85e-07!248|ontology_enrichment_celltype_v019=CL:0000134;1.85e-11;55!CL:0002334;1.42e-10;12!CL:0000723;1.68e-09;61!CL:0000048;7.98e-09;58!CL:0000034;2.14e-07;69|ontology_enrichment_celltype_v019_2=CL:0000048,5.90e-12,427;CL:0000723,1.99e-11,433;CL:0000057,5.65e-11,76;CL:0000034,9.50e-11,441;CL:0002334,1.50e-10,12;CL:0000134,1.83e-07,354;CL:0002320,2.28e-07,361;CL:0000136,9.96e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!9.84e-09!14|ontology_enrichment_disease_v019=DOID:2394;1.33e-13;14|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-13,14|ontology_enrichment_uberon=UBERON:0000914!2.38e-09!83;UBERON:0002329!2.38e-09!83;UBERON:0003077!2.38e-09!83;UBERON:0003059!2.38e-09!83;UBERON:0007282!2.38e-09!83;UBERON:0009618!2.38e-09!83;UBERON:0007285!2.38e-09!83;UBERON:0004290!5.23e-09!70;UBERON:0004872!5.98e-09!84;UBERON:0005256!6.66e-09!143;UBERON:0000486!3.64e-08!82;UBERON:0001134!4.09e-08!61;UBERON:0002036!4.09e-08!61;UBERON:0003082!4.09e-08!61;UBERON:0002385!7.82e-08!63;UBERON:0001015!7.82e-08!63;UBERON:0000383!7.82e-08!63;UBERON:0001637!7.96e-08!42;UBERON:0003509!7.96e-08!42;UBERON:0004572!7.96e-08!42;UBERON:0000490!3.02e-07!138;UBERON:0003914!8.53e-07!118;UBERON:0002100!8.95e-07!216|ontology_enrichment_uberon_v019=UBERON:0004457;1.50e-10;9!UBERON:0000042;1.50e-10;9!UBERON:0003688;1.52e-09;6!UBERON:0002358;1.52e-09;6!UBERON:0003684;1.52e-09;6!UBERON:0001178;1.52e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.38e-09,6;UBERON:0002358,1.38e-09,6;UBERON:0003684,1.38e-09,6;UBERON:0001178,1.38e-09,6;UBERON:0002384,6.47e-08,371;UBERON:0004457,1.69e-07,12;UBERON:0000042,1.69e-07,12;UBERON:0001637,2.40e-07,42;UBERON:0003509,2.40e-07,42;UBERON:0004572,2.40e-07,42|phase1_expression=1.2717486548939,2.5692062866918,1.26858963686374,8.00586386825043,3.12872766099101,5.23403114460221,0,0.631719873426831,1.56711376919903,0,0,0.218441372130172,0,0.618831764800233,1.65698687863958,0.672325146451775,1.80808358407193,6.57279081348636,2.43966399395253,0,0,0,0.286235987131057,0.410623275218653,0.502170558379211,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,0,0.255725123687061,1.80719576192283,0.50133791063589,2.462390822334,1.5905718941022,1.94653948121054,0.189069634328136,0.665188192387692,0.351339142772504,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,2.58070378531837,0,0.56530794192401,0.838998872419812,1.37559020970034,0.417989933073621,0,0,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.22452937262617,0.563057402416611,0,0,0.549605231791222,0,0,0,3.47880366186723,1.51956613997496,0.529636723252875,4.58938593198102,2.12801029319014,0.560677600142307,1.06748995729705,0.98667019366864,0.311211035399766,0.942974704487816,0.980771418680752,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.896692083310806,0.822041490506354,0.647491777472526,0.702254033511242,0.816616685019573,0.859840221182376,0.619954687054593,0,1.23633464639278,0,0,0,0.500474079487857,0,0,2.75839016219118,1.20190447125277,1.47461838108027,1.61450672119976,0.427114777637135,1.69545520927649,3.90118424909723,1.8549455262919,1.28820270022815,0.744467425326359,0.843881661206331,1.85130309806277,1.7670364197088,1.19664868234989,0.80823028409406,5.32514388774922,2.21654616100809,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0,0.132529768321485,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,2.57296375277154,1.38134921352481,1.85747171212792,0.721879481669586,0.946454400318751,0.842923450390509,0.723033089650446,0.772057809126758,0.871517776369625,1.18635309555548,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,1.9656544333552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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1281 | |||
|description=CAGE_peak_at_chr7:128409190..128409213,+ | |||
|id=chr7:128409190..128409213,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.87e-21!180;CL:0000057!9.35e-14!75;CL:0000680!9.08e-09!57;CL:0000056!9.08e-09!57;CL:0000355!9.08e-09!57;CL:0000222!3.78e-08!119;CL:0000548!4.16e-08!679;CL:0000004!4.16e-08!679;CL:0000255!4.16e-08!679;CL:0000187!6.92e-08!54;CL:0000012!7.84e-08!682;CL:0000393!1.14e-07!60;CL:0000211!1.14e-07!60;CL:0002334!4.73e-07!12;CL:0000220!4.86e-07!246;CL:0002620!7.81e-07!23;CL:0002321!7.85e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.85e-11;55!CL:0002334;1.42e-10;12!CL:0000723;1.68e-09;61!CL:0000048;7.98e-09;58!CL:0000034;2.14e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.90e-12,427;CL:0000723,1.99e-11,433;CL:0000057,5.65e-11,76;CL:0000034,9.50e-11,441;CL:0002334,1.50e-10,12;CL:0000134,1.83e-07,354;CL:0002320,2.28e-07,361;CL:0000136,9.96e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.84e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.33e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.38e-09!83;UBERON:0002329!2.38e-09!83;UBERON:0003077!2.38e-09!83;UBERON:0003059!2.38e-09!83;UBERON:0007282!2.38e-09!83;UBERON:0009618!2.38e-09!83;UBERON:0007285!2.38e-09!83;UBERON:0004290!5.23e-09!70;UBERON:0004872!5.98e-09!84;UBERON:0005256!6.66e-09!143;UBERON:0000486!3.64e-08!82;UBERON:0001134!4.09e-08!61;UBERON:0002036!4.09e-08!61;UBERON:0003082!4.09e-08!61;UBERON:0002385!7.82e-08!63;UBERON:0001015!7.82e-08!63;UBERON:0000383!7.82e-08!63;UBERON:0001637!7.96e-08!42;UBERON:0003509!7.96e-08!42;UBERON:0004572!7.96e-08!42;UBERON:0000490!3.02e-07!138;UBERON:0003914!8.53e-07!118;UBERON:0002100!8.95e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.50e-10;9!UBERON:0000042;1.50e-10;9!UBERON:0003688;1.52e-09;6!UBERON:0002358;1.52e-09;6!UBERON:0003684;1.52e-09;6!UBERON:0001178;1.52e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.38e-09,6;UBERON:0002358,1.38e-09,6;UBERON:0003684,1.38e-09,6;UBERON:0001178,1.38e-09,6;UBERON:0002384,6.47e-08,371;UBERON:0004457,1.69e-07,12;UBERON:0000042,1.69e-07,12;UBERON:0001637,2.40e-07,42;UBERON:0003509,2.40e-07,42;UBERON:0004572,2.40e-07,42 | |||
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| |||
|short_description=p@chr7:128409190..128409213,+ | |||
}} |
Revision as of 23:06, 13 September 2013
Short description: | p@chr7:128409190..128409213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:128409190..128409213, + |
Coexpression cluster: | C1281_Smooth_Fibroblast_Adipocyte_Olfactory_leiomyoma_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.90e-12 | 427 |
somatic stem cell | 1.99e-11 | 433 |
fibroblast | 5.65e-11 | 76 |
stem cell | 9.50e-11 | 441 |
preadipocyte | 1.50e-10 | 12 |
mesenchymal cell | 1.83e-07 | 354 |
connective tissue cell | 2.28e-07 | 361 |
fat cell | 9.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.38e-09 | 6 |
peritoneum | 1.38e-09 | 6 |
abdominal cavity | 1.38e-09 | 6 |
visceral peritoneum | 1.38e-09 | 6 |
connective tissue | 6.47e-08 | 371 |
cavity lining | 1.69e-07 | 12 |
serous membrane | 1.69e-07 | 12 |
artery | 2.40e-07 | 42 |
arterial blood vessel | 2.40e-07 | 42 |
arterial system | 2.40e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-13 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.