FFCP PHASE1:Mm9::chr2:172889040..172889047,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:172889040..172889047,+|id=chr2:172889040..172889047,+|ontology_enrichment_celltype=CL:0000791!5.75e-33!9;CL:0000789!5.75e-33!9;CL:0002420!5.75e-33!9;CL:0002419!5.75e-33!9;CL:0000790!5.75e-33!9;CL:0000624!1.79e-27!8;CL:0000084!6.55e-27!11;CL:0000827!6.55e-27!11;CL:0000893!1.34e-25!6;CL:0002489!1.34e-25!6;CL:0000898!1.34e-25!6;CL:0000809!1.34e-25!6;CL:0000810!1.34e-25!6;CL:0000895!1.34e-25!6;CL:0000808!1.34e-25!6;CL:0000894!1.34e-25!6;CL:0000806!1.34e-25!6;CL:0000807!1.34e-25!6;CL:0000805!1.34e-25!6;CL:0002425!1.34e-25!6;CL:0002436!1.34e-25!6;CL:0002427!1.34e-25!6;CL:0002428!1.34e-25!6;CL:0002429!1.34e-25!6;CL:0002433!1.34e-25!6;CL:0002431!1.34e-25!6;CL:0002432!1.34e-25!6;CL:0000838!1.23e-24!12;CL:0000542!1.04e-22!13;CL:0000051!1.04e-22!13;CL:0000738!2.88e-17!17;CL:0002087!2.88e-17!17;CL:0002031!1.38e-11!25;CL:0000988!6.22e-09!32;CL:0002032!6.22e-09!32;CL:0000037!6.22e-09!32;CL:0000566!6.22e-09!32;CL:0000837!6.22e-09!32;CL:0000815!1.33e-07!1;CL:0000792!1.33e-07!1;CL:0000625!2.05e-07!1;CL:0000355!4.50e-07!9|ontology_enrichment_celltype_v019_2=CL:0000815,7.11e-12,1;CL:0000792,7.11e-12,1;CL:0000355,1.30e-11,9|ontology_enrichment_disease=DOID:0060100!4.00e-20!3;DOID:4045!4.00e-20!3;DOID:0050686!2.32e-10!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-33,3;DOID:4045,2.80e-33,3;DOID:0050686,4.67e-17,6|ontology_enrichment_uberon=UBERON:0002370!2.63e-09!23;UBERON:0000974!2.63e-09!23;UBERON:0004807!2.63e-09!23;UBERON:0005058!2.63e-09!23;UBERON:0003351!2.63e-09!23;UBERON:0009113!2.63e-09!23;UBERON:0003295!2.63e-09!23;UBERON:0009722!2.63e-09!23;UBERON:0005562!2.63e-09!23;UBERON:0007690!2.63e-09!23;UBERON:0006562!6.62e-09!24;UBERON:0003408!6.62e-09!24;UBERON:0001557!6.62e-09!24;UBERON:0001042!6.62e-09!24;UBERON:0008814!6.62e-09!24;UBERON:0009145!6.62e-09!24;UBERON:0000072!7.02e-08!27;UBERON:0004177!2.59e-07!29;UBERON:0001134!4.50e-07!9;UBERON:0002036!4.50e-07!9;UBERON:0002385!4.50e-07!9;UBERON:0000486!4.50e-07!9;UBERON:0001015!4.50e-07!9;UBERON:0004290!4.50e-07!9;UBERON:0003082!4.50e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.30e-11,9;UBERON:0002036,1.30e-11,9;UBERON:0002385,1.30e-11,9;UBERON:0000486,1.30e-11,9;UBERON:0007503,1.30e-11,9;UBERON:0001015,1.30e-11,9;UBERON:0002329,1.30e-11,9;UBERON:0003082,1.30e-11,9;UBERON:0003059,1.30e-11,9;UBERON:0007282,1.30e-11,9;UBERON:0004290,1.30e-11,9;UBERON:0009618,1.30e-11,9;UBERON:0000383,1.61e-10,10;UBERON:0007524,1.27e-09,11;UBERON:0003077,1.27e-09,11;UBERON:0007285,1.27e-09,11|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.171217968225505,0,1.88320802924326,0.786783621770977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9744805528441,7.0320181007142,2.61761871986899,70.5877785637217,27.3218193983378,12.62326917881,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:172889040..172889047,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:172889040..172889047,+ | |||
|id=chr2:172889040..172889047,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.75e-33!9;CL:0000789!5.75e-33!9;CL:0002420!5.75e-33!9;CL:0002419!5.75e-33!9;CL:0000790!5.75e-33!9;CL:0000624!1.79e-27!8;CL:0000084!6.55e-27!11;CL:0000827!6.55e-27!11;CL:0000893!1.34e-25!6;CL:0002489!1.34e-25!6;CL:0000898!1.34e-25!6;CL:0000809!1.34e-25!6;CL:0000810!1.34e-25!6;CL:0000895!1.34e-25!6;CL:0000808!1.34e-25!6;CL:0000894!1.34e-25!6;CL:0000806!1.34e-25!6;CL:0000807!1.34e-25!6;CL:0000805!1.34e-25!6;CL:0002425!1.34e-25!6;CL:0002436!1.34e-25!6;CL:0002427!1.34e-25!6;CL:0002428!1.34e-25!6;CL:0002429!1.34e-25!6;CL:0002433!1.34e-25!6;CL:0002431!1.34e-25!6;CL:0002432!1.34e-25!6;CL:0000838!1.23e-24!12;CL:0000542!1.04e-22!13;CL:0000051!1.04e-22!13;CL:0000738!2.88e-17!17;CL:0002087!2.88e-17!17;CL:0002031!1.38e-11!25;CL:0000988!6.22e-09!32;CL:0002032!6.22e-09!32;CL:0000037!6.22e-09!32;CL:0000566!6.22e-09!32;CL:0000837!6.22e-09!32;CL:0000815!1.33e-07!1;CL:0000792!1.33e-07!1;CL:0000625!2.05e-07!1;CL:0000355!4.50e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,7.11e-12,1;CL:0000792,7.11e-12,1;CL:0000355,1.30e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.00e-20!3;DOID:4045!4.00e-20!3;DOID:0050686!2.32e-10!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-33,3;DOID:4045,2.80e-33,3;DOID:0050686,4.67e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.63e-09!23;UBERON:0000974!2.63e-09!23;UBERON:0004807!2.63e-09!23;UBERON:0005058!2.63e-09!23;UBERON:0003351!2.63e-09!23;UBERON:0009113!2.63e-09!23;UBERON:0003295!2.63e-09!23;UBERON:0009722!2.63e-09!23;UBERON:0005562!2.63e-09!23;UBERON:0007690!2.63e-09!23;UBERON:0006562!6.62e-09!24;UBERON:0003408!6.62e-09!24;UBERON:0001557!6.62e-09!24;UBERON:0001042!6.62e-09!24;UBERON:0008814!6.62e-09!24;UBERON:0009145!6.62e-09!24;UBERON:0000072!7.02e-08!27;UBERON:0004177!2.59e-07!29;UBERON:0001134!4.50e-07!9;UBERON:0002036!4.50e-07!9;UBERON:0002385!4.50e-07!9;UBERON:0000486!4.50e-07!9;UBERON:0001015!4.50e-07!9;UBERON:0004290!4.50e-07!9;UBERON:0003082!4.50e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.30e-11,9;UBERON:0002036,1.30e-11,9;UBERON:0002385,1.30e-11,9;UBERON:0000486,1.30e-11,9;UBERON:0007503,1.30e-11,9;UBERON:0001015,1.30e-11,9;UBERON:0002329,1.30e-11,9;UBERON:0003082,1.30e-11,9;UBERON:0003059,1.30e-11,9;UBERON:0007282,1.30e-11,9;UBERON:0004290,1.30e-11,9;UBERON:0009618,1.30e-11,9;UBERON:0000383,1.61e-10,10;UBERON:0007524,1.27e-09,11;UBERON:0003077,1.27e-09,11;UBERON:0007285,1.27e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.171217968225505,0,1.88320802924326,0.786783621770977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9744805528441,7.0320181007142,2.61761871986899,70.5877785637217,27.3218193983378,12.62326917881,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:172889040..172889047,+ | |||
}} |
Revision as of 23:05, 13 September 2013
Short description: | p@chr2:172889040..172889047, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:172889040..172889047, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 7.11e-12 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.11e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.30e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.30e-11 | 9 |
striated muscle tissue | 1.30e-11 | 9 |
muscle tissue | 1.30e-11 | 9 |
multilaminar epithelium | 1.30e-11 | 9 |
epithelial vesicle | 1.30e-11 | 9 |
musculature | 1.30e-11 | 9 |
somite | 1.30e-11 | 9 |
myotome | 1.30e-11 | 9 |
presomitic mesoderm | 1.30e-11 | 9 |
presumptive segmental plate | 1.30e-11 | 9 |
dermomyotome | 1.30e-11 | 9 |
trunk paraxial mesoderm | 1.30e-11 | 9 |
musculature of body | 1.61e-10 | 10 |
dense mesenchyme tissue | 1.27e-09 | 11 |
paraxial mesoderm | 1.27e-09 | 11 |
presumptive paraxial mesoderm | 1.27e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.80e-33 | 3 |
muscle cancer | 2.80e-33 | 3 |
organ system cancer | 4.67e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.