FFCP PHASE1:Hg19::chr7:116312540..116312549,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7029|TSSclassifier=S|UniProt=A1L467,P08581|association_with_transcript=81bp_to_ENST00000318493,NM_000245,NM_001127500,uc003vii.1,uc003vij.2,uc010lkg.2,uc010lkh.2_5end|coexpression_cluster_id=C2876|description=CAGE_peak_14_at_MET_5end|id=chr7:116312540..116312549,+|ontology_enrichment_celltype=CL:0000066!2.61e-22!254;CL:0002076!1.11e-10!43;CL:0000223!3.22e-09!59;CL:0000075!5.56e-08!27;CL:0000710!1.70e-07!20;CL:0000147!3.44e-07!14;CL:0002251!6.64e-07!21|ontology_enrichment_celltype_v019=CL:0000148;1.36e-14;10!CL:0000147;1.11e-13;14!CL:0002541;5.84e-13;3!CL:0002567;5.84e-13;3!CL:0000710;2.82e-09;20!CL:0000075;1.22e-08;27!CL:0002251;4.15e-07;20!CL:0002076;8.20e-07;42|ontology_enrichment_celltype_v019_2=CL:0000148,1.27e-14,10;CL:0000541,1.27e-14,10;CL:0002541,1.42e-13,3;CL:0000147,1.46e-13,14;CL:0002567,4.91e-13,3;CL:0000066,8.00e-11,253;CL:0000710,2.60e-09,20;CL:0000075,1.15e-08,27;CL:0002076,6.23e-08,42;CL:0000223,1.16e-07,58;CL:0002251,5.59e-07,20|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.54e-14!106;DOID:0050687!1.88e-14!143;DOID:1749!9.94e-09!14;DOID:299!3.13e-07!25|ontology_enrichment_disease_v019=DOID:1749;4.21e-10;14!DOID:4929;5.95e-09;2|ontology_enrichment_disease_v019_2=DOID:1749,3.94e-10,14;DOID:4929,7.64e-09,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003124;5.84e-13;3!UBERON:0000920;5.84e-13;3|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.42e-13,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0.283604451492204,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.717558542755448,0.213557388818567,0,2.40072876867522,0.309157587715317,0.257640540045629,0.18611685633159,1.68776332241266,0.584622030967192,0.252433774244115,0,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.491953754172454,0.171567810298526,0,0,0.402115889646523,0.277765335475589,0,0,0,0.34779121492523,0.587043471179108,0,0,0,0,0,0,0,0,0,1.51183915378974,0.283550194484773,0.806026704325635,0,1.15014803749563,0,0,0,0,0,3.4923841860693,1.14596527667483,2.34434894420094,1.71072446022705,0.514137463516618,1.20137223137567,3.71574362419752,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.604297247958111,1.20303882181971,0.552485933615378,0,0.182091168006717,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,1.02580050046556,0.656029291399411,0.325378394664303,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0.576570202095319,1.27612712494584,0.708104465988849,0,0,0,0,1.06461206063404,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,1.41904425628239,0,0,0.379473173765715,0,0.192444225451024,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0.921482106297696,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0.227586896570999,2.54253650292766,0.945550727071745,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0.434589487688032,1.91400695839152,1.74035427463538,2.66517388009317,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0.282706142867882,0.216388639742091,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0.293977192243133,1.39294730528644,0.17472666824203,0,0,0.365446585430928,0.164230914106418,0,0,0.677942222341597,0,0.19871461170299,0.379864775735272,0.195551382734803,0.88174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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |||
|TSSclassifier=S | |||
|UniProt=A1L467,P08581 | |||
|association_with_transcript=81bp_to_ENST00000318493,NM_000245,NM_001127500,uc003vii.1,uc003vij.2,uc010lkg.2,uc010lkh.2_5end | |||
|coexpression_cluster_id=C2876 | |||
|description=CAGE_peak_14_at_MET_5end | |||
|id=chr7:116312540..116312549,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.61e-22!254;CL:0002076!1.11e-10!43;CL:0000223!3.22e-09!59;CL:0000075!5.56e-08!27;CL:0000710!1.70e-07!20;CL:0000147!3.44e-07!14;CL:0002251!6.64e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.36e-14;10!CL:0000147;1.11e-13;14!CL:0002541;5.84e-13;3!CL:0002567;5.84e-13;3!CL:0000710;2.82e-09;20!CL:0000075;1.22e-08;27!CL:0002251;4.15e-07;20!CL:0002076;8.20e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.27e-14,10;CL:0000541,1.27e-14,10;CL:0002541,1.42e-13,3;CL:0000147,1.46e-13,14;CL:0002567,4.91e-13,3;CL:0000066,8.00e-11,253;CL:0000710,2.60e-09,20;CL:0000075,1.15e-08,27;CL:0002076,6.23e-08,42;CL:0000223,1.16e-07,58;CL:0002251,5.59e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.54e-14!106;DOID:0050687!1.88e-14!143;DOID:1749!9.94e-09!14;DOID:299!3.13e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.21e-10;14!DOID:4929;5.95e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.94e-10,14;DOID:4929,7.64e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.84e-13;3!UBERON:0000920;5.84e-13;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.42e-13,3 | |||
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| |||
|short_description=p14@MET | |||
}} |
Revision as of 22:52, 13 September 2013
Short description: | p14@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_MET_5end |
Coexpression cluster: | C2876_squamous_gastric_pharyngeal_renal_signet_papillotubular_gall |
Association with transcript: | 81bp_to_ENST00000318493, NM_000245, NM_001127500, uc003vii.1, uc003vij.2, uc010lkg.2, uc010lkh.2_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | A1L467P08581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.27e-14 | 10 |
melanoblast | 1.27e-14 | 10 |
chorionic membrane mesenchymal stem cell | 1.42e-13 | 3 |
pigment cell | 1.46e-13 | 14 |
light melanocyte | 4.91e-13 | 3 |
epithelial cell | 8.00e-11 | 253 |
neurecto-epithelial cell | 2.60e-09 | 20 |
columnar/cuboidal epithelial cell | 1.15e-08 | 27 |
endo-epithelial cell | 6.23e-08 | 42 |
endodermal cell | 1.16e-07 | 58 |
epithelial cell of alimentary canal | 5.59e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.42e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.94e-10 | 14 |
tubular adenocarcinoma | 7.64e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.