FFCP PHASE1:Mm9::chr2:164256745..164256756,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=99|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:164256745..164256756,-|id=chr2:164256745..164256756,-|ontology_enrichment_celltype=CL:0002453!2.43e-07!8;CL:0000333!4.17e-07!10;CL:0000095!4.17e-07!10;CL:0000243!4.17e-07!10;CL:0000123!4.17e-07!10;CL:0000125!4.17e-07!10;CL:0000030!4.17e-07!10;CL:0000339!4.17e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,1.03e-13,8;CL:0000333,7.87e-11,10;CL:0000095,7.87e-11,10;CL:0000243,7.87e-11,10;CL:0000123,7.87e-11,10;CL:0000125,7.87e-11,10;CL:0000030,7.87e-11,10;CL:0000339,7.87e-11,10;CL:0000182,1.34e-10,5;CL:0000192,8.68e-09,3;CL:0000359,8.68e-09,3;CL:0002539,8.68e-09,3;CL:0000514,8.68e-09,3;CL:0000128,2.20e-08,6;CL:0000126,2.20e-08,6;CL:0000127,2.20e-08,6;CL:0002194,8.24e-08,4;CL:0000766,8.24e-08,4;CL:0000234,8.24e-08,4;CL:0000576,8.24e-08,4;CL:0000235,8.24e-08,4;CL:0000864,8.24e-08,4;CL:0002009,8.24e-08,4;CL:0000040,8.24e-08,4;CL:0000559,8.24e-08,4;CL:0000680,1.17e-07,6;CL:0000187,1.17e-07,6;CL:0000056,1.17e-07,6;CL:0000878,1.41e-07,2;CL:0000129,1.41e-07,2;CL:0002605,6.49e-07,2;CL:0002604,6.49e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.68e-09,3;UBERON:0004237,8.68e-09,3;UBERON:0004695,8.68e-09,3;UBERON:0002111,8.68e-09,3;UBERON:0004178,8.68e-09,3|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.630924330716475,0,0,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.1330713617802,2.12891555560981,1.10128051297009,5.47673941043627,0.872100625521786,1.97717564461025,3.11087838518853,0.699932108126813,2.87505128729943,0,0,0,2.31533492432352,0.573066879877513,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,4.19440154725767,5.76327457982332,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.151143120213571,0.289864488701678,0,24.478968013479,3.77792234146472,3.89865850468601,3.58421509677868,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,1.01104889002957,2.16949371466214,0.517875767294343,0,0,0,0.230615497256059,0,0.23517741427141,0,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,3.77004072264219,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,1.72910439899755,0.398282546508734,0.379335801906163,0,0,0.203651327845314,0.775809948670503,0.841629838683823,0.569128834118316,0,0.470996183524124,1.23397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,5.5125977103512,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,3.37710464954357,0.184753190166605,0,0,0,0,0,0,1.17080188714679,0.315270288212382,0,0,0.327726629431476,0,1.3018415272336,3.01582567878545,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0.819674726883377,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.977321756121456,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0.807322133479528,0.120625849856312,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.330613822901344,1.30877970992015,1.03691978633434,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0.506868376472335,0.234714477291508,0.13020438484395,1.25831213310853,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.384847366561318,0.233753804363138,0,0.665957860122194,0.538283139656854,1.34307693091263,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.956441660344217,0,0.463735671240843|short_description=p@chr2:164256745..164256756,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:164256745..164256756,- | |||
|id=chr2:164256745..164256756,- | |||
|ontology_enrichment_celltype=CL:0002453!2.43e-07!8;CL:0000333!4.17e-07!10;CL:0000095!4.17e-07!10;CL:0000243!4.17e-07!10;CL:0000123!4.17e-07!10;CL:0000125!4.17e-07!10;CL:0000030!4.17e-07!10;CL:0000339!4.17e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.03e-13,8;CL:0000333,7.87e-11,10;CL:0000095,7.87e-11,10;CL:0000243,7.87e-11,10;CL:0000123,7.87e-11,10;CL:0000125,7.87e-11,10;CL:0000030,7.87e-11,10;CL:0000339,7.87e-11,10;CL:0000182,1.34e-10,5;CL:0000192,8.68e-09,3;CL:0000359,8.68e-09,3;CL:0002539,8.68e-09,3;CL:0000514,8.68e-09,3;CL:0000128,2.20e-08,6;CL:0000126,2.20e-08,6;CL:0000127,2.20e-08,6;CL:0002194,8.24e-08,4;CL:0000766,8.24e-08,4;CL:0000234,8.24e-08,4;CL:0000576,8.24e-08,4;CL:0000235,8.24e-08,4;CL:0000864,8.24e-08,4;CL:0002009,8.24e-08,4;CL:0000040,8.24e-08,4;CL:0000559,8.24e-08,4;CL:0000680,1.17e-07,6;CL:0000187,1.17e-07,6;CL:0000056,1.17e-07,6;CL:0000878,1.41e-07,2;CL:0000129,1.41e-07,2;CL:0002605,6.49e-07,2;CL:0002604,6.49e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.68e-09,3;UBERON:0004237,8.68e-09,3;UBERON:0004695,8.68e-09,3;UBERON:0002111,8.68e-09,3;UBERON:0004178,8.68e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.630924330716475,0,0,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.1330713617802,2.12891555560981,1.10128051297009,5.47673941043627,0.872100625521786,1.97717564461025,3.11087838518853,0.699932108126813,2.87505128729943,0,0,0,2.31533492432352,0.573066879877513,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,4.19440154725767,5.76327457982332,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.227178579999552,0.151143120213571,0.289864488701678,0,24.478968013479,3.77792234146472,3.89865850468601,3.58421509677868,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,1.01104889002957,2.16949371466214,0.517875767294343,0,0,0,0.230615497256059,0,0.23517741427141,0,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,3.77004072264219,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,1.72910439899755,0.398282546508734,0.379335801906163,0,0,0.203651327845314,0.775809948670503,0.841629838683823,0.569128834118316,0,0.470996183524124,1.23397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,5.5125977103512,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,3.37710464954357,0.184753190166605,0,0,0,0,0,0,1.17080188714679,0.315270288212382,0,0,0.327726629431476,0,1.3018415272336,3.01582567878545,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0.819674726883377,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.977321756121456,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0.807322133479528,0.120625849856312,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.330613822901344,1.30877970992015,1.03691978633434,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0.506868376472335,0.234714477291508,0.13020438484395,1.25831213310853,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.384847366561318,0.233753804363138,0,0.665957860122194,0.538283139656854,1.34307693091263,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.429742108096597,0.956441660344217,0,0.463735671240843 | |||
|short_description=p@chr2:164256745..164256756,- | |||
}} |
Revision as of 22:52, 13 September 2013
Short description: | p@chr2:164256745..164256756, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:164256745..164256756, - |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.03e-13 | 8 |
migratory neural crest cell | 7.87e-11 | 10 |
neuron associated cell | 7.87e-11 | 10 |
glial cell (sensu Vertebrata) | 7.87e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 7.87e-11 | 10 |
glial cell | 7.87e-11 | 10 |
glioblast | 7.87e-11 | 10 |
glioblast (sensu Vertebrata) | 7.87e-11 | 10 |
hepatocyte | 1.34e-10 | 5 |
smooth muscle cell | 8.68e-09 | 3 |
vascular associated smooth muscle cell | 8.68e-09 | 3 |
aortic smooth muscle cell | 8.68e-09 | 3 |
smooth muscle myoblast | 8.68e-09 | 3 |
oligodendrocyte | 2.20e-08 | 6 |
macroglial cell | 2.20e-08 | 6 |
astrocyte | 2.20e-08 | 6 |
monopoietic cell | 8.24e-08 | 4 |
myeloid leukocyte | 8.24e-08 | 4 |
phagocyte | 8.24e-08 | 4 |
monocyte | 8.24e-08 | 4 |
macrophage | 8.24e-08 | 4 |
tissue-resident macrophage | 8.24e-08 | 4 |
macrophage dendritic cell progenitor | 8.24e-08 | 4 |
monoblast | 8.24e-08 | 4 |
promonocyte | 8.24e-08 | 4 |
muscle precursor cell | 1.17e-07 | 6 |
muscle cell | 1.17e-07 | 6 |
myoblast | 1.17e-07 | 6 |
central nervous system macrophage | 1.41e-07 | 2 |
microglial cell | 1.41e-07 | 2 |
astrocyte of the cerebral cortex | 6.49e-07 | 2 |
astrocyte of the hippocampus | 6.49e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 8.68e-09 | 3 |
blood vessel smooth muscle | 8.68e-09 | 3 |
arterial system smooth muscle | 8.68e-09 | 3 |
artery smooth muscle tissue | 8.68e-09 | 3 |
aorta smooth muscle tissue | 8.68e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.