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FFCP PHASE1:Mm9::chr2:130912020..130912045,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20612|HGNC=|MCL_coexpression_id=86|UniProt=G3X8X6,Q62230|association_with_transcript=455bp_to_ENSMUST00000028794,ENSMUST00000110226,ENSMUST00000110227,ENSMUST00000169205,NM_011426,uc008mko.1,uc008mkp.1,uc008mkq.1_5end|description=CAGE_peak_1_at_Siglec1_5end|id=chr2:130912020..130912045,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!5.61e-13!193;UBERON:0004120!5.61e-13!193;UBERON:0006603!5.61e-13!193;UBERON:0005177!8.53e-10!85;UBERON:0000466!1.30e-09!79;UBERON:0002365!1.40e-09!25;UBERON:0002330!1.40e-09!25;UBERON:0005172!1.54e-09!49;UBERON:0005173!1.54e-09!49;UBERON:0002417!1.54e-09!49;UBERON:0000916!1.54e-09!49;UBERON:0009569!2.06e-09!66;UBERON:0003104!3.81e-09!131;UBERON:0009142!3.81e-09!131;UBERON:0000077!2.21e-08!97;UBERON:0002100!2.70e-08!98;UBERON:0002405!5.27e-08!70;UBERON:0009854!5.53e-08!23;UBERON:0009856!5.53e-08!23;UBERON:0002107!6.47e-08!22;UBERON:0007499!6.47e-08!22;UBERON:0006925!6.47e-08!22;UBERON:0009497!6.47e-08!22;UBERON:0000015!6.47e-08!22;UBERON:0002423!6.47e-08!22;UBERON:0006235!6.47e-08!22;UBERON:0008835!6.47e-08!22;UBERON:0003894!6.47e-08!22;UBERON:0004161!6.47e-08!22;UBERON:0008836!6.47e-08!22;UBERON:0001041!7.09e-08!92;UBERON:0000468!2.15e-07!333;UBERON:0005256!2.88e-07!47;UBERON:0001048!4.82e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.10e-11,79;UBERON:0002365,4.03e-10,25;UBERON:0002330,4.03e-10,25;UBERON:0002100,2.57e-09,90;UBERON:0005172,5.30e-09,49;UBERON:0005173,5.30e-09,49;UBERON:0002417,5.30e-09,49;UBERON:0000916,5.30e-09,49;UBERON:0009569,7.50e-09,66;UBERON:0009854,2.65e-08,23;UBERON:0009856,2.65e-08,23;UBERON:0002107,3.28e-08,22;UBERON:0007499,3.28e-08,22;UBERON:0006925,3.28e-08,22;UBERON:0009497,3.28e-08,22;UBERON:0000015,3.28e-08,22;UBERON:0002423,3.28e-08,22;UBERON:0006235,3.28e-08,22;UBERON:0008835,3.28e-08,22;UBERON:0003894,3.28e-08,22;UBERON:0004161,3.28e-08,22;UBERON:0008836,3.28e-08,22;UBERON:0005256,1.18e-07,45|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,3.23960427823721,2.09868563438444,1.57731082679119,1.91960207048034,2.12194825899015,5.10259740906419,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,4.69434806608824,0,0,0.388859798148567,0.55994568650145,0,0,0,0.336093799142464,1.28629718017973,4.87106847895886,6.70373719960675,0.202316460859598,0,0.633831403506179,0,0,113.837314236097,169.096147998953,121.492099655783,38.0492140358374,24.5899715405795,0.103689612308478,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.510749352340751,0,0,0,0,0.837548997004143,0,0.763991238884051,0,0.142371680799103,0.372798891650601,0.227178579999552,0.151143120213571,0.869593466105033,10.3250865237766,0,1.07940638327563,2.59910566979068,1.79210754838934,7.44355426698285,0,0,0,0,1.28326477414318,0,0,0,0,0,8.90634261808668,147.594593678888,6.38301197978747,0.346970653532272,0.608930956624282,1.61430848079241,2.41156224884196,3.05730638552832,2.63899841792318,0.741584903203122,9.9773556274739,22.9998743506967,1.13236794963186,3.5334642953663,4.363877278217,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0.599162557619291,0,0,0.347648640384553,0,0.20778804455956,0.486723789203273,2.03678727700633,8.33526703087623,6.82351447770922,3.36706969418358,0.130120442962704,0,0,1.05493372485001,0.680364991513279,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.351902248327898,0,0.556094498451196,0.696504333044333,1.85203922767149,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,1.3413670069981,1.98501082024188,0.658239399653922,0.820837320395476,0.810688095458557,1.46199987425332,8.34290438105992,2.54992195644706,0.420579897128254,0.411618449517138,0,2.11560453330835,0.213288250535234,0,0.257734922644187,0.201683524623343,0.22237804384487,0.951128130562796,0.474529061544512,1.15289268306808,0.502670417600539,2.38747766449381,1.9496408711912,1.79763881730844,2.16138049874694,4.77939055810481,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0,1.19230893813542,0.189709611372772,0.295220295959204,1.255989822731,0.246794327843601,18.3800628794032,1.66845105716094,0.982794975566015,3.82265591054251,5.68008339887808,6.02942899381042,8.14802725700543,21.0018180339092,16.0513874507285,8.78596522201861,17.2521847832825,22.3284568601102,19.3463357331028,11.8712072635143,13.2754086006215,9.64887042726734,8.31389355749721,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,6.9032655856944,3.70753930929818,2.67979744980525,1.99318220683897,1.91345722388985,4.7520361267564,5.87128938344045,6.94315481191256,140.235894063523,322.536070504495,13.769399644533,16.2802680319792,0.642202359951168,0.117211686592203,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0.642642632843614,8.23252494207958,2.49291845134157,1.14020871547503,9.403297009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|EntrezGene=20612
|HGNC=
|MCL_coexpression_id=86
|UniProt=G3X8X6,Q62230
|association_with_transcript=455bp_to_ENSMUST00000028794,ENSMUST00000110226,ENSMUST00000110227,ENSMUST00000169205,NM_011426,uc008mko.1,uc008mkp.1,uc008mkq.1_5end
|description=CAGE_peak_1_at_Siglec1_5end
|id=chr2:130912020..130912045,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!5.61e-13!193;UBERON:0004120!5.61e-13!193;UBERON:0006603!5.61e-13!193;UBERON:0005177!8.53e-10!85;UBERON:0000466!1.30e-09!79;UBERON:0002365!1.40e-09!25;UBERON:0002330!1.40e-09!25;UBERON:0005172!1.54e-09!49;UBERON:0005173!1.54e-09!49;UBERON:0002417!1.54e-09!49;UBERON:0000916!1.54e-09!49;UBERON:0009569!2.06e-09!66;UBERON:0003104!3.81e-09!131;UBERON:0009142!3.81e-09!131;UBERON:0000077!2.21e-08!97;UBERON:0002100!2.70e-08!98;UBERON:0002405!5.27e-08!70;UBERON:0009854!5.53e-08!23;UBERON:0009856!5.53e-08!23;UBERON:0002107!6.47e-08!22;UBERON:0007499!6.47e-08!22;UBERON:0006925!6.47e-08!22;UBERON:0009497!6.47e-08!22;UBERON:0000015!6.47e-08!22;UBERON:0002423!6.47e-08!22;UBERON:0006235!6.47e-08!22;UBERON:0008835!6.47e-08!22;UBERON:0003894!6.47e-08!22;UBERON:0004161!6.47e-08!22;UBERON:0008836!6.47e-08!22;UBERON:0001041!7.09e-08!92;UBERON:0000468!2.15e-07!333;UBERON:0005256!2.88e-07!47;UBERON:0001048!4.82e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.10e-11,79;UBERON:0002365,4.03e-10,25;UBERON:0002330,4.03e-10,25;UBERON:0002100,2.57e-09,90;UBERON:0005172,5.30e-09,49;UBERON:0005173,5.30e-09,49;UBERON:0002417,5.30e-09,49;UBERON:0000916,5.30e-09,49;UBERON:0009569,7.50e-09,66;UBERON:0009854,2.65e-08,23;UBERON:0009856,2.65e-08,23;UBERON:0002107,3.28e-08,22;UBERON:0007499,3.28e-08,22;UBERON:0006925,3.28e-08,22;UBERON:0009497,3.28e-08,22;UBERON:0000015,3.28e-08,22;UBERON:0002423,3.28e-08,22;UBERON:0006235,3.28e-08,22;UBERON:0008835,3.28e-08,22;UBERON:0003894,3.28e-08,22;UBERON:0004161,3.28e-08,22;UBERON:0008836,3.28e-08,22;UBERON:0005256,1.18e-07,45
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66353666541928,3.23960427823721,2.09868563438444,1.57731082679119,1.91960207048034,2.12194825899015,5.10259740906419,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,4.69434806608824,0,0,0.388859798148567,0.55994568650145,0,0,0,0.336093799142464,1.28629718017973,4.87106847895886,6.70373719960675,0.202316460859598,0,0.633831403506179,0,0,113.837314236097,169.096147998953,121.492099655783,38.0492140358374,24.5899715405795,0.103689612308478,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.510749352340751,0,0,0,0,0.837548997004143,0,0.763991238884051,0,0.142371680799103,0.372798891650601,0.227178579999552,0.151143120213571,0.869593466105033,10.3250865237766,0,1.07940638327563,2.59910566979068,1.79210754838934,7.44355426698285,0,0,0,0,1.28326477414318,0,0,0,0,0,8.90634261808668,147.594593678888,6.38301197978747,0.346970653532272,0.608930956624282,1.61430848079241,2.41156224884196,3.05730638552832,2.63899841792318,0.741584903203122,9.9773556274739,22.9998743506967,1.13236794963186,3.5334642953663,4.363877278217,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0.599162557619291,0,0,0.347648640384553,0,0.20778804455956,0.486723789203273,2.03678727700633,8.33526703087623,6.82351447770922,3.36706969418358,0.130120442962704,0,0,1.05493372485001,0.680364991513279,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.351902248327898,0,0.556094498451196,0.696504333044333,1.85203922767149,0,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,1.3413670069981,1.98501082024188,0.658239399653922,0.820837320395476,0.810688095458557,1.46199987425332,8.34290438105992,2.54992195644706,0.420579897128254,0.411618449517138,0,2.11560453330835,0.213288250535234,0,0.257734922644187,0.201683524623343,0.22237804384487,0.951128130562796,0.474529061544512,1.15289268306808,0.502670417600539,2.38747766449381,1.9496408711912,1.79763881730844,2.16138049874694,4.77939055810481,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0,1.19230893813542,0.189709611372772,0.295220295959204,1.255989822731,0.246794327843601,18.3800628794032,1.66845105716094,0.982794975566015,3.82265591054251,5.68008339887808,6.02942899381042,8.14802725700543,21.0018180339092,16.0513874507285,8.78596522201861,17.2521847832825,22.3284568601102,19.3463357331028,11.8712072635143,13.2754086006215,9.64887042726734,8.31389355749721,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,6.9032655856944,3.70753930929818,2.67979744980525,1.99318220683897,1.91345722388985,4.7520361267564,5.87128938344045,6.94315481191256,140.235894063523,322.536070504495,13.769399644533,16.2802680319792,0.642202359951168,0.117211686592203,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0.642642632843614,8.23252494207958,2.49291845134157,1.14020871547503,9.40329700943452,1.32745138339963,0.485561272309963,0.302323556964751,0.377210159511796,2.65771703592696,3.07435147943927,3.6179961043551,7.99774204850512,2.13898427030833,5.37262488490887,4.21674434299995,2.06271086496374,1.02131881726136,0.18006109403131,0.646793418913773,0.428674070063185,0.532020700926821,0.535106452806212,0,1.8267896946876,0.938686832254841,1.48282449604674,0.882113592219848,6.5954501176592,6.94297034792394,3.79971427047382,1.55184047204077,1.80554989719567,3.49777003955821,0.18542530201051,17.2579589605831,2.06386867963222,12.222838806401,4.33247451110789,9.15851325730869,17.8446975101088,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,1.74690050996942,1.88810084938749,4.1326727862668,4.18809507174447,3.75883422546199,9.94142900939081,0,0,0,0.583353565032143,0,0.337912250981556,0.821500670520278,0.781226309063701,0.419437377702843,0,1.72818003754719,2.8441000856536,0.405450430580328,0.410843828659309,0.51968329191118,0.895133478337407,1.19208812868759,1.32214994471966,0.886137163047463,1.00966449948148,0.838274873204998,1.31074040677893,2.14407337627455,2.21287235772758,2.22066114144981,1.36038230169127,0,0.179427713218951,0,10.0458588896739,23.6479919068489,9.15758121336325,1.07184189539533,4.01257683228291,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,1.70174701947806,0.419226325255965,1.65459157605013,2.889207461421,2.26638562962784,2.88827288632634,2.52697211763797,1.77435509923168,1.88626341386076,1.40462261204824,1.60062881012173,2.29741875822453,3.33405583898152,1.0429589335037,2.12200142510076,2.06042950401653,1.91358596174717,2.05721551431249,1.4198064492747,0.238436189947321,1.0174249164263,1.69396884747595,1.94613598150856,2.19513567447327,1.57841826862706,2.03706170768793,2.80571135828869,2.13543032623513,1.28055827088233,2.45538625901814,1.85924209423159,1.73615949883027,1.49886346762768,6.55008503647143,5.80151845930405,4.20834330551455,4.19123696327079,2.31867835620421
|short_description=p1@Siglec1
}}

Revision as of 22:05, 13 September 2013

Short description:p1@Siglec1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Siglec1_5end
Coexpression cluster:MCL_coexpression_mm9:86
Association with transcript: 455bp_to_ENSMUST00000028794, ENSMUST00000110226, ENSMUST00000110227, ENSMUST00000169205, NM_011426, uc008mko.1, uc008mkp.1, uc008mkq.1_5end
EntrezGene:Siglec1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Siglec1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7113.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7169.10
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2121.49
Mouse Microglia, donor1.CNhs12629.11718-123C838.05
Mouse Microglia, donor2.CNhs12634.11736-123E824.59
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H9147.59
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G223.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.34
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G421.00
liver, neonate N00.CNhs11117.641-24F416.05
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H113.28
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1140.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1322.54
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H216.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C36.60
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G217.26
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G317.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A94.13
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element7.10e-1179
exocrine gland4.03e-1025
exocrine system4.03e-1025
trunk2.57e-0990
abdomen element5.30e-0949
abdominal segment element5.30e-0949
abdominal segment of trunk5.30e-0949
abdomen5.30e-0949
subdivision of trunk7.50e-0966
digestive tract diverticulum2.65e-0823
sac2.65e-0823
liver3.28e-0822
epithelial sac3.28e-0822
digestive gland3.28e-0822
epithelium of foregut-midgut junction3.28e-0822
anatomical boundary3.28e-0822
hepatobiliary system3.28e-0822
foregut-midgut junction3.28e-0822
hepatic diverticulum3.28e-0822
liver primordium3.28e-0822
septum transversum3.28e-0822
liver bud3.28e-0822
trunk mesenchyme1.18e-0745







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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