FFCP PHASE1:Hg19::chr6:52837942..52837955,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C516|description=CAGE_peak_at_chr6:52837942..52837955,-|id=chr6:52837942..52837955,-|ontology_enrichment_celltype=CL:0000319!5.57e-11!1;CL:0002149!1.96e-07!6;CL:0002255!1.96e-07!6|ontology_enrichment_celltype_v019=CL:0002149;2.19e-12;6!CL:0002255;2.19e-12;6!CL:0000182;8.38e-07;12|ontology_enrichment_celltype_v019_2=CL:0002149,2.19e-12,6;CL:0002255,2.19e-12,6;CL:0000223,2.67e-11,58;CL:0002076,2.04e-07,42;CL:0000182,8.38e-07,12|ontology_enrichment_development_v019=UBERON:0005795;5.73e-08;10!UBERON:0004161;2.63e-07;11|ontology_enrichment_disease=DOID:3151!3.76e-11!1;DOID:3149!3.76e-11!1;DOID:3030!5.57e-11!1;DOID:3001!1.96e-07!6|ontology_enrichment_disease_v019=DOID:3001;2.19e-12;6|ontology_enrichment_disease_v019_2=DOID:3001,2.19e-12,6;DOID:7,7.07e-08,39|ontology_enrichment_uberon=UBERON:0002372!1.10e-10!1;UBERON:0001961!1.10e-10!1;UBERON:0001744!1.10e-10!1;UBERON:0001735!1.10e-10!1;UBERON:0006834!1.21e-10!1;UBERON:0000344!8.58e-08!12|ontology_enrichment_uberon_v019=UBERON:0003343;8.69e-18;4!UBERON:0004785;8.69e-18;4!UBERON:0000974;2.45e-12;6|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.69e-18,4;UBERON:0004785,8.69e-18,4;UBERON:0000974,6.13e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4719231052535,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47736419030255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr6:52837942..52837955,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C516 | |||
|description=CAGE_peak_at_chr6:52837942..52837955,- | |||
|id=chr6:52837942..52837955,- | |||
|ontology_enrichment_celltype=CL:0000319!5.57e-11!1;CL:0002149!1.96e-07!6;CL:0002255!1.96e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.19e-12;6!CL:0002255;2.19e-12;6!CL:0000182;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.19e-12,6;CL:0002255,2.19e-12,6;CL:0000223,2.67e-11,58;CL:0002076,2.04e-07,42;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005795;5.73e-08;10!UBERON:0004161;2.63e-07;11 | |||
|ontology_enrichment_disease=DOID:3151!3.76e-11!1;DOID:3149!3.76e-11!1;DOID:3030!5.57e-11!1;DOID:3001!1.96e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.19e-12,6;DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.10e-10!1;UBERON:0001961!1.10e-10!1;UBERON:0001744!1.10e-10!1;UBERON:0001735!1.10e-10!1;UBERON:0006834!1.21e-10!1;UBERON:0000344!8.58e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;8.69e-18;4!UBERON:0004785;8.69e-18;4!UBERON:0000974;2.45e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.69e-18,4;UBERON:0004785,8.69e-18,4;UBERON:0000974,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4719231052535,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47736419030255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr6:52837942..52837955,- | |||
}} |
Revision as of 21:23, 13 September 2013
Short description: | p@chr6:52837942..52837955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52837942..52837955, - |
Coexpression cluster: | C516_endometrioid_clear_serous_anaplastic_malignant_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.19e-12 | 6 |
stromal cell of endometrium | 2.19e-12 | 6 |
endodermal cell | 2.67e-11 | 58 |
endo-epithelial cell | 2.04e-07 | 42 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.69e-18 | 4 |
respiratory system mucosa | 8.69e-18 | 4 |
neck | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.19e-12 | 6 |
disease of anatomical entity | 7.07e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.