FFCP PHASE1:Mm9::chr1:9838351..9838366,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170755|HGNC=|MCL_coexpression_id=46|UniProt=Q9ERE3|association_with_transcript=0bp_to_ENSMUST00000171265,NM_001037759,uc007agx.1_5end|description=CAGE_peak_6_at_Sgk3_5end|id=chr1:9838351..9838366,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.20e-13,3;UBERON:0000478,4.20e-13,3;UBERON:0000158,4.20e-13,3;UBERON:0000305,1.63e-10,1;UBERON:0000473,3.09e-10,14;UBERON:0003135,1.41e-09,15;UBERON:0003133,3.44e-09,24;UBERON:0003101,5.35e-09,16;UBERON:0000079,5.35e-09,16;UBERON:0005156,1.73e-08,26;UBERON:0000990,1.73e-08,26;UBERON:0004176,1.74e-08,17;UBERON:0009196,1.74e-08,17;UBERON:0009117,1.74e-08,17;UBERON:0000991,4.96e-08,18;UBERON:0005564,4.96e-08,18|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0.239316476986009,0.171200729931206,0.174840804837995,0,0,0,0.788655413395594,0.548457734422955,0,0.17008658030214,0.695036658406197,1.82839852397255,0,0,0,0,0,0,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,12.1125534189843,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0,0,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0.305518091550949,0.248813941220186,0.758168275301024,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0.340182495756639,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0.590292695242212,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,0.569128834118316,0.590440591918409,0.941992367048249,0.863780147452604,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,0,0,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.164970122972535,3.98235415019888,0,0.604647113929502,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.329098041204242,0,0.469343416127421,2.54198485036584,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.656563598980245,0,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.690999869022119,0,0.158167996790568,0.406638934253697,0,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,1.19613236835183,0.330916980914195,1.16670713006429,0.516639293910924,0.844780627453891,0.469428954583016,1.3020438484395,1.46803082195995,0.724752362478018,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.504832249740738,0.914481679859998,0.806609481094724,0.877120926657772,0.192423683280659,0.350630706544707,0.226730383615211,0,0.269141569828427,0.503653849092235,0,0.563047426353546,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p6@Sgk3}} | ||
|EntrezGene=170755 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=Q9ERE3 | |||
|association_with_transcript=0bp_to_ENSMUST00000171265,NM_001037759,uc007agx.1_5end | |||
|description=CAGE_peak_6_at_Sgk3_5end | |||
|id=chr1:9838351..9838366,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.20e-13,3;UBERON:0000478,4.20e-13,3;UBERON:0000158,4.20e-13,3;UBERON:0000305,1.63e-10,1;UBERON:0000473,3.09e-10,14;UBERON:0003135,1.41e-09,15;UBERON:0003133,3.44e-09,24;UBERON:0003101,5.35e-09,16;UBERON:0000079,5.35e-09,16;UBERON:0005156,1.73e-08,26;UBERON:0000990,1.73e-08,26;UBERON:0004176,1.74e-08,17;UBERON:0009196,1.74e-08,17;UBERON:0009117,1.74e-08,17;UBERON:0000991,4.96e-08,18;UBERON:0005564,4.96e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0,0.239316476986009,0.171200729931206,0.174840804837995,0,0,0,0.788655413395594,0.548457734422955,0,0.17008658030214,0.695036658406197,1.82839852397255,0,0,0,0,0,0,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,12.1125534189843,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0,0,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0.305518091550949,0.248813941220186,0.758168275301024,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0.340182495756639,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0.590292695242212,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,0.569128834118316,0.590440591918409,0.941992367048249,0.863780147452604,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,0,0,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.164970122972535,3.98235415019888,0,0.604647113929502,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.329098041204242,0,0.469343416127421,2.54198485036584,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.656563598980245,0,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.690999869022119,0,0.158167996790568,0.406638934253697,0,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,1.19613236835183,0.330916980914195,1.16670713006429,0.516639293910924,0.844780627453891,0.469428954583016,1.3020438484395,1.46803082195995,0.724752362478018,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.504832249740738,0.914481679859998,0.806609481094724,0.877120926657772,0.192423683280659,0.350630706544707,0.226730383615211,0,0.269141569828427,0.503653849092235,0,0.563047426353546,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p6@Sgk3 | |||
}} |
Revision as of 21:22, 13 September 2013
Short description: | p6@Sgk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sgk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000171265, NM_001037759, uc007agx.1_5end |
EntrezGene: | Sgk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.20e-13 | 3 |
extraembryonic structure | 4.20e-13 | 3 |
membranous layer | 4.20e-13 | 3 |
amnion | 1.63e-10 | 1 |
testis | 3.09e-10 | 14 |
male reproductive organ | 1.41e-09 | 15 |
reproductive organ | 3.44e-09 | 24 |
male organism | 5.35e-09 | 16 |
male reproductive system | 5.35e-09 | 16 |
reproductive structure | 1.73e-08 | 26 |
reproductive system | 1.73e-08 | 26 |
external genitalia | 1.74e-08 | 17 |
indifferent external genitalia | 1.74e-08 | 17 |
indifferent gonad | 1.74e-08 | 17 |
gonad | 4.96e-08 | 18 |
gonad primordium | 4.96e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.