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FFCP PHASE1:Mm9::chr1:87961200..87961223,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70247|HGNC=|UniProt=Q3TXS7,D6RGR5|association_with_transcript=6bp_to_ENSMUST00000027432,ENSMUST00000139715,NM_027357,uc007buy.1_5end|description=CAGE_peak_2_at_Psmd1_5end|id=chr1:87961200..87961223,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.01e-09!47;UBERON:0005256!6.67e-09!47;UBERON:0002107!1.59e-08!22;UBERON:0007499!1.59e-08!22;UBERON:0006925!1.59e-08!22;UBERON:0009497!1.59e-08!22;UBERON:0000015!1.59e-08!22;UBERON:0002423!1.59e-08!22;UBERON:0006235!1.59e-08!22;UBERON:0008835!1.59e-08!22;UBERON:0003894!1.59e-08!22;UBERON:0004161!1.59e-08!22;UBERON:0008836!1.59e-08!22;UBERON:0002365!2.77e-08!25;UBERON:0002330!2.77e-08!25;UBERON:0009854!1.92e-07!23;UBERON:0009856!1.92e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.01e-09,47;UBERON:0005256,3.14e-09,45;UBERON:0002107,1.59e-08,22;UBERON:0007499,1.59e-08,22;UBERON:0006925,1.59e-08,22;UBERON:0009497,1.59e-08,22;UBERON:0000015,1.59e-08,22;UBERON:0002423,1.59e-08,22;UBERON:0006235,1.59e-08,22;UBERON:0008835,1.59e-08,22;UBERON:0003894,1.59e-08,22;UBERON:0004161,1.59e-08,22;UBERON:0008836,1.59e-08,22;UBERON:0002365,2.77e-08,25;UBERON:0002330,2.77e-08,25;UBERON:0003104,1.00e-07,61;UBERON:0009142,1.00e-07,61;UBERON:0009854,1.92e-07,23;UBERON:0009856,1.92e-07,23|phase1_expression=26.9050063136054,40.4811472861659,28.6649520815408,39.6228116811947,36.5653882860833,26.8606835059024,29.4351927150362,19.497621839678,15.0643932702283,17.3207749478275,43.4893639292783,50.6553209620386,19.5168832121575,17.1343988741235,42.6380495124048,54.4658469278632,85.3465491316339,21.6091583270393,21.526966076101,24.1902101524877,25.598030335472,16.5815888505478,31.3439746966722,29.5985982167802,36.9348942518144,36.7508457033613,40.491627638953,32.5361561355692,31.3538642103017,39.5687303723091,37.4724563007465,17.7808588568697,23.3724619282137,31.6963362030877,27.7297554961224,29.9222361645286,23.6836453264348,41.8531630736908,42.973443948809,39.2642807980349,22.9410280332096,26.6387739133794,33.5002143591496,47.4631003767926,51.3981041282939,44.6018607752886,2.34717403304412,9.59310688073965,6.59058548203415,13.9989527333484,17.2183298599196,5.75010257459886,20.3016953329861,17.4086914082723,12.0993767691287,30.6138728882777,33.2378790328958,24.7522604293172,19.8270131642406,21.6886301501533,18.3811107016792,9.4876468979357,6.22506357277798,7.64914759689189,4.94433181283487,4.2628806896766,4.49400165777607,4.61061966385865,19.8047159509192,16.3357185381346,19.7705463670299,15.1395021734016,12.8103753751936,23.1507610516263,21.8527673921579,20.2228133054205,25.3266526298594,35.6247673257674,33.9470438496298,18.4640802822271,19.3953804437108,21.3574481928272,28.4766658981409,32.6402313818374,38.657956687533,21.2132581541041,27.620106075026,24.6047268489397,48.540489926571,49.3482287497309,28.6965843814661,65.3922146505854,27.19885334831,42.0968489477497,40.2861378817555,46.5947962581229,39.3244376368905,39.8806954832655,27.2775304833012,37.8073344726064,30.5630220915397,43.6310023208681,7.64415719119937,42.6640021891999,40.483824669097,42.8178172652917,40.9474800461974,33.1133251185274,35.7334279433097,34.2901341239745,31.7478147982029,21.3125834818499,32.0555541185921,28.4865790644457,33.0424267051331,42.60097446076,21.7531571606249,35.8606405161381,26.5383165584962,47.5594538845383,38.8681072490293,33.4563924663303,14.9113408974498,28.9852989041432,29.1130922470703,36.0194447844114,39.6588062114596,34.1944556666242,34.5631017638736,39.8443100816828,33.8550446085784,37.1936882254079,40.1534179644159,38.8687495142102,29.9214784165767,36.0175604010422,30.1444516996936,30.1064868876425,33.1066813548114,52.6104639716185,27.7156543510559,23.9098188610812,23.7682011343061,24.5648853072216,29.051585137617,29.7223831060852,29.703446685434,39.8403190938084,27.5927030954038,22.1254113796349,21.8179393963297,21.2619860454748,22.2437799380478,31.342694986995,25.1054206417691,22.4908721504897,45.6438571753603,46.8373190948782,33.5312929286799,24.6479669317247,28.6121793176937,24.8485644816201,25.0949419720323,24.5955289684255,27.7680803197281,29.5318109833018,30.314894358157,38.4157976387988,39.3298041293218,42.8477081246439,51.9651069188935,50.0003956994637,42.3731722511728,51.9378840602639,38.2727706386712,35.6049958832324,45.2673732687803,35.4363759329149,20.9022485524529,22.759193842323,23.9693478059094,27.0255922995279,24.9063409106255,26.4413620296457,41.2840283543725,44.1393198660349,37.4489461112402,31.634079054543,31.9741102875357,37.7504151634773,30.0431889325825,36.6419942788036,14.2250925714811,26.6199034380668,38.3206301288473,21.7906920794486,18.6194387680921,30.4389458323983,27.6976032604247,41.183231286309,30.6147519290681,33.6874257506515,38.8352941484165,47.7177002348029,43.0464199297915,47.8956299379738,46.8606880407442,40.517762838406,32.5921090280217,35.3866249064497,34.0483976227574,47.4991244815381,51.7565543498476,3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|EntrezGene=70247
|HGNC=
|UniProt=Q3TXS7,D6RGR5
|association_with_transcript=6bp_to_ENSMUST00000027432,ENSMUST00000139715,NM_027357,uc007buy.1_5end
|description=CAGE_peak_2_at_Psmd1_5end
|id=chr1:87961200..87961223,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!2.01e-09!47;UBERON:0005256!6.67e-09!47;UBERON:0002107!1.59e-08!22;UBERON:0007499!1.59e-08!22;UBERON:0006925!1.59e-08!22;UBERON:0009497!1.59e-08!22;UBERON:0000015!1.59e-08!22;UBERON:0002423!1.59e-08!22;UBERON:0006235!1.59e-08!22;UBERON:0008835!1.59e-08!22;UBERON:0003894!1.59e-08!22;UBERON:0004161!1.59e-08!22;UBERON:0008836!1.59e-08!22;UBERON:0002365!2.77e-08!25;UBERON:0002330!2.77e-08!25;UBERON:0009854!1.92e-07!23;UBERON:0009856!1.92e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.01e-09,47;UBERON:0005256,3.14e-09,45;UBERON:0002107,1.59e-08,22;UBERON:0007499,1.59e-08,22;UBERON:0006925,1.59e-08,22;UBERON:0009497,1.59e-08,22;UBERON:0000015,1.59e-08,22;UBERON:0002423,1.59e-08,22;UBERON:0006235,1.59e-08,22;UBERON:0008835,1.59e-08,22;UBERON:0003894,1.59e-08,22;UBERON:0004161,1.59e-08,22;UBERON:0008836,1.59e-08,22;UBERON:0002365,2.77e-08,25;UBERON:0002330,2.77e-08,25;UBERON:0003104,1.00e-07,61;UBERON:0009142,1.00e-07,61;UBERON:0009854,1.92e-07,23;UBERON:0009856,1.92e-07,23
|phase1_expression=26.9050063136054,40.4811472861659,28.6649520815408,39.6228116811947,36.5653882860833,26.8606835059024,29.4351927150362,19.497621839678,15.0643932702283,17.3207749478275,43.4893639292783,50.6553209620386,19.5168832121575,17.1343988741235,42.6380495124048,54.4658469278632,85.3465491316339,21.6091583270393,21.526966076101,24.1902101524877,25.598030335472,16.5815888505478,31.3439746966722,29.5985982167802,36.9348942518144,36.7508457033613,40.491627638953,32.5361561355692,31.3538642103017,39.5687303723091,37.4724563007465,17.7808588568697,23.3724619282137,31.6963362030877,27.7297554961224,29.9222361645286,23.6836453264348,41.8531630736908,42.973443948809,39.2642807980349,22.9410280332096,26.6387739133794,33.5002143591496,47.4631003767926,51.3981041282939,44.6018607752886,2.34717403304412,9.59310688073965,6.59058548203415,13.9989527333484,17.2183298599196,5.75010257459886,20.3016953329861,17.4086914082723,12.0993767691287,30.6138728882777,33.2378790328958,24.7522604293172,19.8270131642406,21.6886301501533,18.3811107016792,9.4876468979357,6.22506357277798,7.64914759689189,4.94433181283487,4.2628806896766,4.49400165777607,4.61061966385865,19.8047159509192,16.3357185381346,19.7705463670299,15.1395021734016,12.8103753751936,23.1507610516263,21.8527673921579,20.2228133054205,25.3266526298594,35.6247673257674,33.9470438496298,18.4640802822271,19.3953804437108,21.3574481928272,28.4766658981409,32.6402313818374,38.657956687533,21.2132581541041,27.620106075026,24.6047268489397,48.540489926571,49.3482287497309,28.6965843814661,65.3922146505854,27.19885334831,42.0968489477497,40.2861378817555,46.5947962581229,39.3244376368905,39.8806954832655,27.2775304833012,37.8073344726064,30.5630220915397,43.6310023208681,7.64415719119937,42.6640021891999,40.483824669097,42.8178172652917,40.9474800461974,33.1133251185274,35.7334279433097,34.2901341239745,31.7478147982029,21.3125834818499,32.0555541185921,28.4865790644457,33.0424267051331,42.60097446076,21.7531571606249,35.8606405161381,26.5383165584962,47.5594538845383,38.8681072490293,33.4563924663303,14.9113408974498,28.9852989041432,29.1130922470703,36.0194447844114,39.6588062114596,34.1944556666242,34.5631017638736,39.8443100816828,33.8550446085784,37.1936882254079,40.1534179644159,38.8687495142102,29.9214784165767,36.0175604010422,30.1444516996936,30.1064868876425,33.1066813548114,52.6104639716185,27.7156543510559,23.9098188610812,23.7682011343061,24.5648853072216,29.051585137617,29.7223831060852,29.703446685434,39.8403190938084,27.5927030954038,22.1254113796349,21.8179393963297,21.2619860454748,22.2437799380478,31.342694986995,25.1054206417691,22.4908721504897,45.6438571753603,46.8373190948782,33.5312929286799,24.6479669317247,28.6121793176937,24.8485644816201,25.0949419720323,24.5955289684255,27.7680803197281,29.5318109833018,30.314894358157,38.4157976387988,39.3298041293218,42.8477081246439,51.9651069188935,50.0003956994637,42.3731722511728,51.9378840602639,38.2727706386712,35.6049958832324,45.2673732687803,35.4363759329149,20.9022485524529,22.759193842323,23.9693478059094,27.0255922995279,24.9063409106255,26.4413620296457,41.2840283543725,44.1393198660349,37.4489461112402,31.634079054543,31.9741102875357,37.7504151634773,30.0431889325825,36.6419942788036,14.2250925714811,26.6199034380668,38.3206301288473,21.7906920794486,18.6194387680921,30.4389458323983,27.6976032604247,41.183231286309,30.6147519290681,33.6874257506515,38.8352941484165,47.7177002348029,43.0464199297915,47.8956299379738,46.8606880407442,40.517762838406,32.5921090280217,35.3866249064497,34.0483976227574,47.4991244815381,51.7565543498476,35.7255309761763,46.8056509671841,54.5570376365761,52.9222369889641,46.3145780508832,30.2995231873232,24.0654092948516,28.1929409244705,22.4063513223248,21.3568125942537,25.6284573885978,20.9478403979692,23.4160377429359,29.9506773801763,39.4207147574819,28.3829488210327,34.2474327755892,34.3643113913132,29.9423551263729,33.1740824666399,41.3368319702219,39.8329061145419,27.869611376778,39.1743439570212,40.4380318743101,36.5574928189986,70.1869177628157,21.7700671397217,24.9880796349849,22.1886099664783,22.941004603445,26.2902435417225,21.7968928707401,25.0982635038434,20.4579100537918,28.8560077900962,29.5615611108062,29.3815976381116,16.9162323483892,30.4598613991187,26.3952196756057,19.9117707509944,19.9080121647085,23.8835610002153,19.6149282946134,16.832207894204,26.1319875752338,29.9776820075137,26.9014959813354,23.5288269733916,23.3867200872504,29.5172104009997,23.721174947083,31.3204437293485,22.6876978479451,15.5230420539305,22.076714608254,20.3941268688615,23.5446839234733,22.8723138636948,22.5304062344803,34.9660845014928,23.513359865884,33.7408449024092,42.5406532589018,35.6836382997951,44.872816146548,50.2557568253205,52.3609470186745,32.3543728659134,42.8332447644277,32.2945964707942,21.8770080041016,36.8537109465726,43.3247451110789,46.7494258805906,41.8664056967936,36.375384018685,35.4077174378855,32.2005938964307,26.7307773044232,26.7303914576059,29.6846422005199,25.9212817972323,24.2542423376784,22.2729815021101,34.7950013672837,37.1940550764012,39.2633912976044,36.292192521702,30.4456263412594,46.7865139107878,22.5769984526408,22.9987301735366,25.2786544847262,26.7360834598903,23.4849014432182,29.57402413873,27.2127164323856,27.9974449616648,38.170291090509,38.0199608260382,15.1685337901526,25.3406519112705,24.2397858908992,29.3621059929817,24.8847106977799,22.2523117355017,24.6400671515936,26.1410463099002,23.0203505881777,26.9010027492149,21.8792821746944,19.9788655516492,21.7438762107145,18.8171812512326,48.7470324772704,41.289387327576,47.1894885765842,34.248461738272,30.3307662630539,23.8356743823001,26.7401371430207,41.8018339204178,22.069172577556,26.5433366030021,35.4450432110526,32.6550442660456,29.2150409984269,36.309373547844,44.5682399459923,33.0761025113585,32.8734478353681,33.5325382648311,36.7609821343792,27.5036471098068,32.3210147454835,25.0978400458577,24.796885140966,28.7170032800336,21.3258469802016,29.5588147976148,25.9604172121007,25.994455976937,24.2589323293246,25.8548885888045,28.1053248665254,26.313263599037,28.6192431249766,26.7649285333158,35.7220268462305,28.9710814862139,29.3222015104832,27.1976694530182,34.444547311449,24.6865861717499,26.6213709239006,27.8970342238365,26.5983942437161,28.4210328854298,27.6689767805782,28.170907822407,33.6729230640439,26.6176063137889,29.7405403978601,33.3364400928929,27.4827505827822,40.1046422306296,28.3534419370318,25.4636726495107,24.7312472158566,28.5396562303398,32.6604002153413,34.8144764365295,40.5888211179909,41.272474740435
|short_description=p2@Psmd1
}}

Revision as of 21:07, 13 September 2013

Short description:p2@Psmd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Psmd1_5end
Coexpression cluster:NA
Association with transcript: 6bp_to_ENSMUST00000027432, ENSMUST00000139715, NM_027357, uc007buy.1_5end
EntrezGene:Psmd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Psmd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I628.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E643.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F150.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A142.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A354.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A585.35
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.53
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D129.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.93
GP2+ M cell, pool1.CNhs13228.11845-124H936.75
GP2+ M cell, pool2.CNhs13231.11846-124I140.49
GP2+ M cell, pool3.CNhs13240.11847-124I232.54
Ileum epithelium, pool1.CNhs13199.10252-104B931.35
Ileum epithelium, pool2.CNhs13232.10253-104C139.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.92
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G841.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H339.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H226.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D847.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D951.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.30
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C130.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.75
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D733.95
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.60
Mouse Schwann, donor1.CNhs12507.11728-123D948.54
Mouse Schwann, donor2.CNhs12573.11746-123F949.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F765.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C842.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F440.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F646.59
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A739.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I739.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I837.81
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G242.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B633.11
accessory axillary lymph node, adult.CNhs10475.1063-29H935.73
adrenal gland, adult.CNhs10508.49-24D734.29
adrenal gland, embryo E14.CNhs11038.406-44C531.75
adrenal gland, embryo E16.CNhs11004.1254-43D621.31
adrenal gland, embryo E17.CNhs11043.1263-45I132.06
adrenal gland, embryo E18.CNhs11026.1262-18F528.49
adrenal gland, neonate N00.CNhs11191.1311-23C133.04
adrenal gland, neonate N25.CNhs11223.1377-27I342.60
amnion, adult pregnant day17.5.CNhs10488.583-22A821.75
aorta, adult.CNhs10498.46-23H135.86
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F547.56
bone (os femoris), neonate N16.CNhs11225.1525-43A638.87
bone (os femoris), neonate N20.CNhs11195.1350-25C333.46
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B228.99
cerebellum, neonate N30.CNhs11135.1395-42I229.11
colon, adult.CNhs10468.36-18H736.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C739.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.56
corpora quadrigemina, adult.CNhs10501.16-22A439.84
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F137.19
cortex, adult.CNhs10473.12-14D540.15
cortex, neonate N30.CNhs11107.1392-42F238.87
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B236.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.11
epididymis, adult.CNhs10490.58-23B233.11
eyeball, adult.CNhs10484.31-12G452.61
eyeball, embryo E12.CNhs11016.345-16C627.72
eyeball, embryo E14.CNhs10521.399-16E223.91
eyeball, embryo E15.CNhs10593.426-16C923.77
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C629.05
eyeball, neonate N01.CNhs11140.1532-43E729.72
eyeball, neonate N02.CNhs11205.1551-44G829.70
eyeball, neonate N16.CNhs11188.777-19A239.84
forelimb, embryo E11.CNhs10596.335-25E227.59
forelimb, embryo E12.CNhs10600.359-14H222.13
forelimb, embryo E13.CNhs10589.384-1E221.82
forelimb, embryo E14.CNhs10577.413-26A821.26
forelimb, embryo E15.CNhs11007.437-20E722.24
forelimb, embryo E17.CNhs10598.1517-43C431.34
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I622.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C845.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D246.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D533.53
heart, embryo E11.CNhs10586.331-24E924.65
heart, embryo E12.CNhs11015.353-12F528.61
heart, embryo E13.CNhs11013.376-3I924.85
heart, embryo E14.CNhs10597.403-26D425.09
heart, embryo E15.CNhs11017.431-16C824.60
heart, embryo E16.CNhs11021.457-17C627.77
heart, embryo E17.CNhs11025.479-18E529.53
heart, embryo E18.CNhs11030.1283-20G330.31
heart, neonate N00.CNhs11213.639-21E338.42
heart, neonate N03.CNhs11221.1349-25I239.33
heart, neonate N10.CNhs11118.749-24G142.85
heart, neonate N16.CNhs11209.782-15G151.97
heart, neonate N20.CNhs11127.821-26I650.00
heart, neonate N25.CNhs11196.1351-25D342.37
heart, neonate N30.CNhs11202.1390-42D251.94
hippocampus, adult.CNhs10478.13-16E838.27
hippocampus, neonate N00.CNhs11228.627-43G135.60
intestinal mucosa, adult.CNhs10506.860-29I345.27
intestine, adult.CNhs10496.178-9A335.44
intestine, embryo E12.CNhs11019.1251-16I520.90
intestine, embryo E13.CNhs11010.381-16D522.76
intestine, embryo E15.CNhs10602.976-16D823.97
intestine, embryo E16.CNhs10585.463-22H427.03
intestine, embryo E17.CNhs10582.482-18D324.91
intestine, embryo E18.CNhs10526.1289-20F726.44
intestine, neonate N00.CNhs11126.644-26D141.28
intestine, neonate N01.CNhs11192.1322-23E944.14
intestine, neonate N06.CNhs11102.688-20B837.45
intestine, neonate N07.CNhs11095.720-20F231.63
intestine, neonate N10.CNhs11098.755-23A531.97
intestine, neonate N20.CNhs11187.827-18D137.75
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G136.64
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F826.62
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I221.79
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G730.44
kidney, neonate N10.CNhs11206.758-6D527.70
kidney, neonate N20.CNhs11113.832-19I141.18
kidney, neonate N25.CNhs11122.1353-25F330.61
kidney, neonate N30.CNhs11203.1385-42H133.69
liver, adult pregnant day01.CNhs10466.508-5B238.84
liver, embryo E12.CNhs10601.355-15F847.72
liver, embryo E13.CNhs10524.378-3H643.05
liver, embryo E14.CNhs10594.409-16E147.90
liver, embryo E15.CNhs10520.433-16D746.86
liver, embryo E16.CNhs10523.462-17F540.52
liver, embryo E17.CNhs10510.481-18A332.59
liver, embryo E18.CNhs10579.499-43G435.39
liver, neonate N00.CNhs11117.641-24F434.05
liver, neonate N03.CNhs11123.1345-25G247.50
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H235.73
liver, neonate N10.CNhs11115.751-24B946.81
liver, neonate N20.CNhs11220.823-25A354.56
liver, neonate N25.CNhs11198.1368-26H152.92
liver, neonate N30.CNhs11106.1382-42D146.31
lung, adult.CNhs10474.28-22B130.30
lung, embryo E12.CNhs10522.354-16G224.07
lung, embryo E14.CNhs10604.404-26F828.19
lung, embryo E15.CNhs11020.432-17C522.41
lung, embryo E16.CNhs10998.458-17B621.36
lung, embryo E17.CNhs10605.480-44A625.63
lung, embryo E18.CNhs10583.1287-20I620.95
lung, neonate N00.CNhs11224.640-42C623.42
lung, neonate N06.CNhs11212.683-20E529.95
lung, neonate N07.CNhs11111.715-19A339.42
lung, neonate N10.CNhs11219.750-23E628.38
lung, neonate N20.CNhs11109.822-18A434.25
lung, neonate N25.CNhs11119.1359-25C734.36
lung, neonate N30.CNhs11133.1394-42H229.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A141.34
mammary gland, adult lactating day02.CNhs10480.595-22B639.83
mammary gland, adult pregnant day19.CNhs10476.588-5H227.87
medulla oblongata, adult.CNhs10477.17-12C239.17
medulla oblongata, neonate N30.CNhs11200.1396-42A340.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C736.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C270.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.77
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.99
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.94
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I729.38
ovary, embryo E18.CNhs11040.505-44H716.92
ovary, neonate N00.CNhs11217.1299-22I430.46
oviduct, adult pregnant day01.CNhs10500.988-6G626.40
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F223.88
pancreas, embryo E16.CNhs11003.460-26E519.61
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G929.98
pancreas, neonate N01.CNhs11138.1531-43D726.90
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B623.39
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E622.69
pituitary gland, embryo E13.CNhs11009.370-44C715.52
pituitary gland, embryo E14.CNhs11037.398-44A522.08
pituitary gland, embryo E15.CNhs10592.427-16B920.39
pituitary gland, embryo E16.CNhs11036.449-43F623.54
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E922.53
placenta, adult pregnant day10.CNhs10472.539-13I734.97
placenta, adult pregnant day17.CNhs10464.577-18G323.51
prostate, adult.CNhs10470.859-1F833.74
skin, adult.CNhs10492.30-1C342.54
skin, neonate N00.CNhs11124.650-25G435.68
skin, neonate N03.CNhs11215.662-22H344.87
skin, neonate N06.CNhs11097.693-20I550.26
skin, neonate N10.CNhs11108.762-6C452.36
small intestine, neonate N16.CNhs11114.790-21I132.35
spinal cord, adult.CNhs10505.24-13C942.83
spleen, adult.CNhs10465.25-2G232.29
spleen, embryo E16.CNhs11035.461-43C121.88
spleen, embryo E18.CNhs11011.1271-21F236.85
spleen, neonate N10.CNhs11116.752-24D143.32
spleen, neonate N20.CNhs11112.824-19H146.75
spleen, neonate N25.CNhs11099.1354-25G341.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.20
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E326.73
stomach, embryo E15.CNhs10603.1252-16G829.68
stomach, embryo E16.CNhs11022.459-17D425.92
stomach, embryo E17.CNhs11006.1035-18D524.25
stomach, embryo E18.CNhs10999.1286-20C622.27
stomach, neonate N03.CNhs11193.1340-24B834.80
stomach, neonate N07.CNhs11210.718-18A937.19
stomach, neonate N25.CNhs11104.1355-25E439.26
stomach, neonate N30.CNhs11134.1386-42I136.29
submandibular gland, adult.CNhs10469.59-29C130.45
testis, adult.CNhs10504.57-7G546.79
testis, embryo E13.CNhs11031.389-23F522.58
testis, embryo E15.CNhs11034.443-27C523.00
testis, embryo E16.CNhs11033.470-26G525.28
testis, embryo E17.CNhs11029.486-18I526.74
testis, embryo E18.CNhs11027.503-18G523.48
testis, neonate N00.CNhs11189.1300-22B729.57
testis, neonate N07.CNhs11222.726-26I427.21
testis, neonate N10.CNhs11204.763-44D928.00
testis, neonate N20.CNhs11110.839-18H338.17
testis, neonate N30.CNhs11130.1391-42E238.02
thymus, adult.CNhs10471.38-12B515.17
thymus, embryo E14.CNhs11041.402-44I425.34
thymus, embryo E15.CNhs11005.430-45I224.24
thymus, embryo E16.CNhs11002.456-26C529.36
thymus, embryo E17.CNhs10581.478-18C124.88
thymus, embryo E18.CNhs10595.1273-19G422.25
thymus, neonate N02.CNhs11181.1541-43F824.64
thymus, neonate N03.CNhs11137.2104-43C726.14
thymus, neonate N06.CNhs11197.681-26C423.02
thymus, neonate N07.CNhs11211.713-19D326.90
thymus, neonate N10.CNhs11194.748-24E421.88
thymus, neonate N20.CNhs11186.820-7A219.98
thymus, neonate N25.CNhs11125.1362-25G721.74
thymus, neonate N30.CNhs11132.1393-42G218.82
tongue, adult.CNhs10499.32-1B448.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H341.29
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F747.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G534.25
urinary bladder, adult.CNhs10481.879-12E430.33
uterus, adult pregnant day19.CNhs10497.590-15F523.84
uterus, adult.CNhs10509.92-27E526.74
vagina, adult.CNhs10502.89-27D541.80
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A544.57
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.76
whole body, embryo E11.CNhs11014.324-5I827.50
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H225.10
whole body, embryo E14.5.CNhs10578.420-27D224.80
whole body, embryo E14.CNhs10519.395-14B128.72
whole body, embryo E16.CNhs10514.453-14F221.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G535.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.32
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.35
whole body, embryo E17.5.CNhs10513.490-9F925.46
whole body, embryo E17.CNhs10517.475-3I524.73
whole body, embryo E18.CNhs10516.493-3B328.54
whole body, neonate N00.CNhs10525.657-19C232.66
whole body, neonate N01.CNhs10576.659-23C634.81
whole body, neonate N06.CNhs10515.692-21D140.59
whole body, neonate N10.CNhs10518.761-6B441.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube2.01e-0947
trunk mesenchyme3.14e-0945
liver1.59e-0822
epithelial sac1.59e-0822
digestive gland1.59e-0822
epithelium of foregut-midgut junction1.59e-0822
anatomical boundary1.59e-0822
hepatobiliary system1.59e-0822
foregut-midgut junction1.59e-0822
hepatic diverticulum1.59e-0822
liver primordium1.59e-0822
septum transversum1.59e-0822
liver bud1.59e-0822
exocrine gland2.77e-0825
exocrine system2.77e-0825
mesenchyme1.00e-0761
entire embryonic mesenchyme1.00e-0761
digestive tract diverticulum1.92e-0723
sac1.92e-0723







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