FFCP PHASE1:Mm9::chr1:75313935..75314066,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13437|HGNC=|MCL_coexpression_id=0|UniProt=Q9Z2W0,Q3TVK3,Q8CAJ7|association_with_transcript=145bp_to_ENSMUST00000066668,NM_001110831,uc011wnp.1_5end|description=CAGE_peak_1_at_Dnpep_5end|id=chr1:75313935..75314066,-|ontology_enrichment_celltype=CL:0000055!5.83e-11!50;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0002319!1.87e-09!43;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0002321!1.60e-07!70;CL:0000220!1.60e-07!70;CL:0000393!3.32e-07!39;CL:0000211!3.32e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002319,1.87e-09,43;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23;CL:0002321,1.60e-07,70;CL:0000393,3.32e-07,39;CL:0000211,3.32e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.56e-13!73;UBERON:0005743!6.56e-13!73;UBERON:0000073!1.79e-12!75;UBERON:0001016!1.79e-12!75;UBERON:0002346!6.43e-12!71;UBERON:0003075!6.43e-12!71;UBERON:0007284!6.43e-12!71;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0004121!5.90e-11!102;UBERON:0000924!5.90e-11!102;UBERON:0006601!5.90e-11!102;UBERON:0002616!1.37e-09!49;UBERON:0000955!3.27e-09!50;UBERON:0006238!3.27e-09!50;UBERON:0002020!8.19e-09!34;UBERON:0000033!1.91e-08!63;UBERON:0003080!2.16e-08!40;UBERON:0002780!2.97e-08!39;UBERON:0001890!2.97e-08!39;UBERON:0006240!2.97e-08!39;UBERON:0000025!3.30e-08!114;UBERON:0004111!3.93e-08!122;UBERON:0007100!1.83e-07!18;UBERON:0000948!1.83e-07!18;UBERON:0005498!1.83e-07!18;UBERON:0004140!1.83e-07!18;UBERON:0009881!1.83e-07!18;UBERON:0004141!1.83e-07!18;UBERON:0003084!1.83e-07!18;UBERON:0007005!1.83e-07!18;UBERON:0004139!1.83e-07!18;UBERON:0004291!1.83e-07!18;UBERON:0002791!2.69e-07!29;UBERON:0003528!2.69e-07!29;UBERON:0001893!2.69e-07!29;UBERON:0004535!6.88e-07!23;UBERON:0001009!6.88e-07!23;UBERON:0003056!8.63e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.88e-19,92;UBERON:0001017,6.56e-13,73;UBERON:0001016,1.79e-12,75;UBERON:0001049,1.30e-11,52;UBERON:0005068,1.30e-11,52;UBERON:0006241,1.30e-11,52;UBERON:0007135,1.30e-11,52;UBERON:0000073,3.73e-11,54;UBERON:0002616,8.45e-10,46;UBERON:0002346,1.34e-09,64;UBERON:0003075,1.34e-09,64;UBERON:0007284,1.34e-09,64;UBERON:0000955,2.13e-09,47;UBERON:0006238,2.13e-09,47;UBERON:0002020,8.19e-09,34;UBERON:0004121,8.35e-09,95;UBERON:0000924,8.35e-09,95;UBERON:0006601,8.35e-09,95;UBERON:0003080,2.16e-08,40;UBERON:0002780,2.97e-08,39;UBERON:0001890,2.97e-08,39;UBERON:0006240,2.97e-08,39;UBERON:0000025,3.30e-08,114;UBERON:0004111,3.93e-08,122;UBERON:0007100,1.83e-07,18;UBERON:0000948,1.83e-07,18;UBERON:0005498,1.83e-07,18;UBERON:0004140,1.83e-07,18;UBERON:0009881,1.83e-07,18;UBERON:0004141,1.83e-07,18;UBERON:0003084,1.83e-07,18;UBERON:0007005,1.83e-07,18;UBERON:0004139,1.83e-07,18;UBERON:0004291,1.83e-07,18;UBERON:0003528,2.69e-07,29;UBERON:0002791,2.69e-07,29;UBERON:0001893,2.69e-07,29;UBERON:0010371,4.91e-07,73;UBERON:0004535,6.88e-07,23;UBERON:0001009,6.88e-07,23;UBERON:0003056,8.63e-07,49|phase1_expression=14.733693933641,19.5426228278042,14.5599756604652,12.0985684522732,16.5295590882295,8.89760141133016,9.57811826441655,4.51931632045517,1.83025338797167,1.17032263160997,1.88339765048055,1.51567102091139,3.25281386869291,4.45844052336887,4.33042690360362,2.63217847606774,2.79824751251259,3.94327706697797,5.07323404341233,5.51706547337439,24.1522944029038,7.24823943766463,9.66439219814061,8.79958325363737,10.0940083669555,16.0784949952206,17.230479846363,11.4199753323521,9.69119439227507,11.8454160987167,9.3126814475228,5.08024538767705,5.53558308826113,0,5.19932915552294,6.15068187826422,6.12508068787107,9.20769587621197,7.0320181007142,8.37637990358077,7.05877785637217,8.19654581950135,8.73918635456076,10.5753327099485,9.7321853970734,10.8292583775392,27.3836970521814,33.5758740825888,26.3623419281366,16.7209713203884,24.4976237844384,44.5632949531412,7.55021727259814,1.45072428402269,1.34437519656986,13.8920095459411,20.3438742356517,14.4388185837684,24.0756588422921,13.7537654610729,22.8179305262225,23.041428180701,28.4574334755565,17.0980946283466,16.8107281636386,20.6039233334369,19.4740071836963,32.6585559523321,15.8645106831971,18.2258016747782,17.4569717921647,24.2803336743233,18.1112203580323,17.7611658861683,16.9646483702278,11.0306254393203,7.70811166995721,11.8749224419225,8.90917892886212,14.5074916503213,12.8082701043374,15.106487746146,17.588528937087,12.9435400307286,13.7518422999129,8.54422897873636,13.2405663143166,17.8943467992289,6.81535739998656,9.21973033302783,4.92769630792852,11.185510400758,5.439770669662,8.63525106620507,11.0461990966104,5.37632264516803,13.2017754923847,5.28333999991979,6.75443611967459,8.12681021373782,11.8308472612412,11.5493829672886,2.54805239706646,0,8.01016851741492,6.08063677140237,8.59391556525132,9.81981365583916,2.33044095282455,13.5082346548991,13.8788261412909,10.6562917409249,17.5267777914604,16.2780451796832,12.346814249249,20.7349875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| ||
|EntrezGene=13437 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9Z2W0,Q3TVK3,Q8CAJ7 | |||
|association_with_transcript=145bp_to_ENSMUST00000066668,NM_001110831,uc011wnp.1_5end | |||
|description=CAGE_peak_1_at_Dnpep_5end | |||
|id=chr1:75313935..75314066,- | |||
|ontology_enrichment_celltype=CL:0000055!5.83e-11!50;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0002319!1.87e-09!43;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23;CL:0002321!1.60e-07!70;CL:0000220!1.60e-07!70;CL:0000393!3.32e-07!39;CL:0000211!3.32e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002319,1.87e-09,43;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23;CL:0002321,1.60e-07,70;CL:0000393,3.32e-07,39;CL:0000211,3.32e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.56e-13!73;UBERON:0005743!6.56e-13!73;UBERON:0000073!1.79e-12!75;UBERON:0001016!1.79e-12!75;UBERON:0002346!6.43e-12!71;UBERON:0003075!6.43e-12!71;UBERON:0007284!6.43e-12!71;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0004121!5.90e-11!102;UBERON:0000924!5.90e-11!102;UBERON:0006601!5.90e-11!102;UBERON:0002616!1.37e-09!49;UBERON:0000955!3.27e-09!50;UBERON:0006238!3.27e-09!50;UBERON:0002020!8.19e-09!34;UBERON:0000033!1.91e-08!63;UBERON:0003080!2.16e-08!40;UBERON:0002780!2.97e-08!39;UBERON:0001890!2.97e-08!39;UBERON:0006240!2.97e-08!39;UBERON:0000025!3.30e-08!114;UBERON:0004111!3.93e-08!122;UBERON:0007100!1.83e-07!18;UBERON:0000948!1.83e-07!18;UBERON:0005498!1.83e-07!18;UBERON:0004140!1.83e-07!18;UBERON:0009881!1.83e-07!18;UBERON:0004141!1.83e-07!18;UBERON:0003084!1.83e-07!18;UBERON:0007005!1.83e-07!18;UBERON:0004139!1.83e-07!18;UBERON:0004291!1.83e-07!18;UBERON:0002791!2.69e-07!29;UBERON:0003528!2.69e-07!29;UBERON:0001893!2.69e-07!29;UBERON:0004535!6.88e-07!23;UBERON:0001009!6.88e-07!23;UBERON:0003056!8.63e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.88e-19,92;UBERON:0001017,6.56e-13,73;UBERON:0001016,1.79e-12,75;UBERON:0001049,1.30e-11,52;UBERON:0005068,1.30e-11,52;UBERON:0006241,1.30e-11,52;UBERON:0007135,1.30e-11,52;UBERON:0000073,3.73e-11,54;UBERON:0002616,8.45e-10,46;UBERON:0002346,1.34e-09,64;UBERON:0003075,1.34e-09,64;UBERON:0007284,1.34e-09,64;UBERON:0000955,2.13e-09,47;UBERON:0006238,2.13e-09,47;UBERON:0002020,8.19e-09,34;UBERON:0004121,8.35e-09,95;UBERON:0000924,8.35e-09,95;UBERON:0006601,8.35e-09,95;UBERON:0003080,2.16e-08,40;UBERON:0002780,2.97e-08,39;UBERON:0001890,2.97e-08,39;UBERON:0006240,2.97e-08,39;UBERON:0000025,3.30e-08,114;UBERON:0004111,3.93e-08,122;UBERON:0007100,1.83e-07,18;UBERON:0000948,1.83e-07,18;UBERON:0005498,1.83e-07,18;UBERON:0004140,1.83e-07,18;UBERON:0009881,1.83e-07,18;UBERON:0004141,1.83e-07,18;UBERON:0003084,1.83e-07,18;UBERON:0007005,1.83e-07,18;UBERON:0004139,1.83e-07,18;UBERON:0004291,1.83e-07,18;UBERON:0003528,2.69e-07,29;UBERON:0002791,2.69e-07,29;UBERON:0001893,2.69e-07,29;UBERON:0010371,4.91e-07,73;UBERON:0004535,6.88e-07,23;UBERON:0001009,6.88e-07,23;UBERON:0003056,8.63e-07,49 | |||
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| |||
|short_description=p1@Dnpep | |||
}} |
Revision as of 20:59, 13 September 2013
Short description: | p1@Dnpep |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnpep_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 145bp_to_ENSMUST00000066668, NM_001110831, uc011wnp.1_5end |
EntrezGene: | Dnpep |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.14e-09 | 44 |
neurectodermal cell | 1.14e-09 | 44 |
neural cell | 1.87e-09 | 43 |
CNS neuron (sensu Vertebrata) | 3.75e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-08 | 23 |
embryonic cell | 1.60e-07 | 70 |
electrically responsive cell | 3.32e-07 | 39 |
electrically active cell | 3.32e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.