FFCP PHASE1:Mm9::chr1:60869073..60869085,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2314|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:60869073..60869085,+|id=chr1:60869073..60869085,+|ontology_enrichment_celltype=CL:0000838!1.30e-07!12;CL:0000542!4.88e-07!13;CL:0000051!4.88e-07!13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.14e-07!18;UBERON:0000948!1.14e-07!18;UBERON:0005498!1.14e-07!18;UBERON:0004140!1.14e-07!18;UBERON:0009881!1.14e-07!18;UBERON:0004141!1.14e-07!18;UBERON:0003084!1.14e-07!18;UBERON:0007005!1.14e-07!18;UBERON:0004139!1.14e-07!18;UBERON:0004291!1.14e-07!18;UBERON:0001723!2.75e-07!1;UBERON:0001033!2.75e-07!1;UBERON:0010056!2.75e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.87e-30,1;UBERON:0001033,2.87e-30,1;UBERON:0010056,2.87e-30,1;UBERON:0000165,6.78e-16,2;UBERON:0000166,6.78e-16,2;UBERON:0000930,6.78e-16,2;UBERON:0007100,1.64e-07,18;UBERON:0000948,1.64e-07,18;UBERON:0005498,1.64e-07,18;UBERON:0004140,1.64e-07,18;UBERON:0009881,1.64e-07,18;UBERON:0004141,1.64e-07,18;UBERON:0003084,1.64e-07,18;UBERON:0007005,1.64e-07,18;UBERON:0004139,1.64e-07,18;UBERON:0004291,1.64e-07,18;UBERON:0000161,3.64e-07,5;UBERON:0003103,4.30e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,1.53685080703735,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0811469050738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:60869073..60869085,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2314 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:60869073..60869085,+ | |||
|id=chr1:60869073..60869085,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.30e-07!12;CL:0000542!4.88e-07!13;CL:0000051!4.88e-07!13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.14e-07!18;UBERON:0000948!1.14e-07!18;UBERON:0005498!1.14e-07!18;UBERON:0004140!1.14e-07!18;UBERON:0009881!1.14e-07!18;UBERON:0004141!1.14e-07!18;UBERON:0003084!1.14e-07!18;UBERON:0007005!1.14e-07!18;UBERON:0004139!1.14e-07!18;UBERON:0004291!1.14e-07!18;UBERON:0001723!2.75e-07!1;UBERON:0001033!2.75e-07!1;UBERON:0010056!2.75e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.87e-30,1;UBERON:0001033,2.87e-30,1;UBERON:0010056,2.87e-30,1;UBERON:0000165,6.78e-16,2;UBERON:0000166,6.78e-16,2;UBERON:0000930,6.78e-16,2;UBERON:0007100,1.64e-07,18;UBERON:0000948,1.64e-07,18;UBERON:0005498,1.64e-07,18;UBERON:0004140,1.64e-07,18;UBERON:0009881,1.64e-07,18;UBERON:0004141,1.64e-07,18;UBERON:0003084,1.64e-07,18;UBERON:0007005,1.64e-07,18;UBERON:0004139,1.64e-07,18;UBERON:0004291,1.64e-07,18;UBERON:0000161,3.64e-07,5;UBERON:0003103,4.30e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,1.53685080703735,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0811469050738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:60869073..60869085,+ | |||
}} |
Revision as of 20:39, 13 September 2013
Short description: | p@chr1:60869073..60869085, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:60869073..60869085, + |
Coexpression cluster: | MCL_coexpression_mm9:2314 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.87e-30 | 1 |
gustatory system | 2.87e-30 | 1 |
future tongue | 2.87e-30 | 1 |
mouth | 6.78e-16 | 2 |
oral opening | 6.78e-16 | 2 |
stomodeum | 6.78e-16 | 2 |
primary circulatory organ | 1.64e-07 | 18 |
heart | 1.64e-07 | 18 |
primitive heart tube | 1.64e-07 | 18 |
primary heart field | 1.64e-07 | 18 |
anterior lateral plate mesoderm | 1.64e-07 | 18 |
heart tube | 1.64e-07 | 18 |
heart primordium | 1.64e-07 | 18 |
cardiac mesoderm | 1.64e-07 | 18 |
cardiogenic plate | 1.64e-07 | 18 |
heart rudiment | 1.64e-07 | 18 |
orifice | 3.64e-07 | 5 |
compound organ | 4.30e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.