FFCP PHASE1:Mm9::chr1:52901876..52901906,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227095|HGNC=|MCL_coexpression_id=1752|UniProt=Q8QZS1|association_with_transcript=0bp_to_ENSMUST00000044478,ENSMUST00000161125,NM_146108,uc007ayp.1,uc011wkr.1_5end|description=CAGE_peak_1_at_Hibch_5end|id=chr1:52901876..52901906,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.42e-13!47;UBERON:0002365!1.00e-09!25;UBERON:0002330!1.00e-09!25;UBERON:0005256!2.64e-09!47;UBERON:0009854!1.22e-08!23;UBERON:0009856!1.22e-08!23;UBERON:0002107!2.82e-08!22;UBERON:0007499!2.82e-08!22;UBERON:0006925!2.82e-08!22;UBERON:0009497!2.82e-08!22;UBERON:0000015!2.82e-08!22;UBERON:0002423!2.82e-08!22;UBERON:0006235!2.82e-08!22;UBERON:0008835!2.82e-08!22;UBERON:0003894!2.82e-08!22;UBERON:0004161!2.82e-08!22;UBERON:0008836!2.82e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.42e-13,47;UBERON:0002365,1.00e-09,25;UBERON:0002330,1.00e-09,25;UBERON:0005256,2.26e-09,45;UBERON:0003104,1.03e-08,61;UBERON:0009142,1.03e-08,61;UBERON:0009854,1.22e-08,23;UBERON:0009856,1.22e-08,23;UBERON:0002107,2.82e-08,22;UBERON:0007499,2.82e-08,22;UBERON:0006925,2.82e-08,22;UBERON:0009497,2.82e-08,22;UBERON:0000015,2.82e-08,22;UBERON:0002423,2.82e-08,22;UBERON:0006235,2.82e-08,22;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0004161,2.82e-08,22;UBERON:0008836,2.82e-08,22|phase1_expression=25.9441132309766,21.6364752736404,13.1949779422965,18.1478526784098,14.5259761684441,14.9412552001582,20.7915250130018,20.1432384568859,1.83025338797167,1.63845168425395,12.1564757440109,10.4501528283891,32.0145364971355,23.3412474458723,19.9865857089398,27.3341610976265,27.9824751251259,22.555544823114,25.6403990842732,27.1609377150739,17.008658030214,23.6312463858107,27.9483774378661,31.5185072903011,25.4644301984559,19.5238867799107,23.26114779259,21.9780657339607,26.0332084655232,12.8535366177565,21.0643985122539,17.14582818341,11.6862309641068,0,32.3513814121428,31.0858786820381,23.0711372576477,62.7797446105362,47.6614560159518,76.4344666201745,64.7054636834116,60.7910481613017,57.7757320107073,38.9021167544534,35.9888105829277,29.5510270980307,3.9119567217402,5.66865406589161,4.83309602015838,8.1660557611199,5.03951117851305,4.31257693094915,20.1339127269284,25.3876749703971,22.5182845425451,21.3525331909836,23.2092086350393,22.17389996793,6.47412674750713,8.99284664762456,4.43681982454325,1.0165335962074,0,4.04954872776629,2.96659908770092,3.5524005747305,4.19440154725767,5.76327457982332,6.73982480005105,5.67024940993101,7.57169860864975,7.42692559449889,8.83474163806454,7.59442955132715,4.31304619582064,6.43453150627015,28.6301290598411,23.111408193419,27.9563890526363,5.93488294785872,8.59983849862651,10.939180781692,28.7558488971422,23.6360296213306,26.2812986176113,18.5616008848411,21.4981238006645,15.4711540034999,10.9802980333117,21.840180870861,9.85539261585705,84.3215399441759,33.3185953516798,107.400935135926,114.36064947079,111.110668000139,71.0648765866664,25.3941180641306,27.2775304833012,20.4936953215997,30.2813352519863,24.3820307087204,5.09610479413291,0,14.0719176657289,12.6679932737549,12.1325866803548,53.4380557085201,41.9479371508418,52.9938436461424,26.1962843416865,35.0135300058962,31.8249386213361,41.4487261519712,31.2785960980975,66.1006270394093,11.3709685157812,257.531454674363,29.1921482143459,29.9268672402707,32.9053862505986,28.6076399349781,44.7340226923493,36.5975996264434,32.2547928492721,28.1002760729451,29.4745206284564,38.3937747835781,35.452593353385,36.0995440965623,23.7900313465686,10.4293112253677,23.292458905765,18.4115129277838,32.6227229958509,27.2565321953833,15.0722258498468,30.9773356819132,33.3594041132451,46.2972082950243,19.9084277732937,22.7603083389138,22.5077662256687,23.6606564002073,18.3018182717072,29.4661556655155,25.1120621820073,39.5816157230694,15.5208954911646,16.6413350547681,21.6419882721657,15.1245055375027,24.7462051810782,21.2433821578522,25.516984914585,20.8985980159418,56.1770549850588,41.4330130454691,34.0996199274711,26.9263504296152,35.6479611171266,38.5332811526572,38.5893919003893,38.5657894224912,45.2002640760018,55.1105449058467,49.8988526603292,58.3826711835847,57.7605073196316,100.798822944564,95.7422640736556,109.94239054385,124.484915370026,117.430616415325,26.9171134162083,15.9502149187891,32.0506219494284,29.618463466317,19.4092307987063,19.2756437644164,22.036335886078,28.6390604965146,24.6839628667806,31.5774539346848,20.404749646414,25.8577358916697,24.6308504624264,24.2726895890204,26.5151158482003,18.8752075817387,31.7722933315801,34.0531577264968,12.5180814629034,21.9357144210679,22.5415471346161,25.4564159806643,22.304536024277,19.6380295692892,30.9859031908861,52.5492126807384,56.5195420228949,57.1328868957936,99.9045353283692,26.8620620202911,33.2184701741313,31.4806957338795,32.8633396649375,32.3177394068239,38.7031294707758,39.4143708307611,46.5328100844352,77.426318519039,74.7594673942244,81.1267265917337,8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| ||
|EntrezGene=227095 | |||
|HGNC= | |||
|MCL_coexpression_id=1752 | |||
|UniProt=Q8QZS1 | |||
|association_with_transcript=0bp_to_ENSMUST00000044478,ENSMUST00000161125,NM_146108,uc007ayp.1,uc011wkr.1_5end | |||
|description=CAGE_peak_1_at_Hibch_5end | |||
|id=chr1:52901876..52901906,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.42e-13!47;UBERON:0002365!1.00e-09!25;UBERON:0002330!1.00e-09!25;UBERON:0005256!2.64e-09!47;UBERON:0009854!1.22e-08!23;UBERON:0009856!1.22e-08!23;UBERON:0002107!2.82e-08!22;UBERON:0007499!2.82e-08!22;UBERON:0006925!2.82e-08!22;UBERON:0009497!2.82e-08!22;UBERON:0000015!2.82e-08!22;UBERON:0002423!2.82e-08!22;UBERON:0006235!2.82e-08!22;UBERON:0008835!2.82e-08!22;UBERON:0003894!2.82e-08!22;UBERON:0004161!2.82e-08!22;UBERON:0008836!2.82e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.42e-13,47;UBERON:0002365,1.00e-09,25;UBERON:0002330,1.00e-09,25;UBERON:0005256,2.26e-09,45;UBERON:0003104,1.03e-08,61;UBERON:0009142,1.03e-08,61;UBERON:0009854,1.22e-08,23;UBERON:0009856,1.22e-08,23;UBERON:0002107,2.82e-08,22;UBERON:0007499,2.82e-08,22;UBERON:0006925,2.82e-08,22;UBERON:0009497,2.82e-08,22;UBERON:0000015,2.82e-08,22;UBERON:0002423,2.82e-08,22;UBERON:0006235,2.82e-08,22;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0004161,2.82e-08,22;UBERON:0008836,2.82e-08,22 | |||
|phase1_expression=25.9441132309766,21.6364752736404,13.1949779422965,18.1478526784098,14.5259761684441,14.9412552001582,20.7915250130018,20.1432384568859,1.83025338797167,1.63845168425395,12.1564757440109,10.4501528283891,32.0145364971355,23.3412474458723,19.9865857089398,27.3341610976265,27.9824751251259,22.555544823114,25.6403990842732,27.1609377150739,17.008658030214,23.6312463858107,27.9483774378661,31.5185072903011,25.4644301984559,19.5238867799107,23.26114779259,21.9780657339607,26.0332084655232,12.8535366177565,21.0643985122539,17.14582818341,11.6862309641068,0,32.3513814121428,31.0858786820381,23.0711372576477,62.7797446105362,47.6614560159518,76.4344666201745,64.7054636834116,60.7910481613017,57.7757320107073,38.9021167544534,35.9888105829277,29.5510270980307,3.9119567217402,5.66865406589161,4.83309602015838,8.1660557611199,5.03951117851305,4.31257693094915,20.1339127269284,25.3876749703971,22.5182845425451,21.3525331909836,23.2092086350393,22.17389996793,6.47412674750713,8.99284664762456,4.43681982454325,1.0165335962074,0,4.04954872776629,2.96659908770092,3.5524005747305,4.19440154725767,5.76327457982332,6.73982480005105,5.67024940993101,7.57169860864975,7.42692559449889,8.83474163806454,7.59442955132715,4.31304619582064,6.43453150627015,28.6301290598411,23.111408193419,27.9563890526363,5.93488294785872,8.59983849862651,10.939180781692,28.7558488971422,23.6360296213306,26.2812986176113,18.5616008848411,21.4981238006645,15.4711540034999,10.9802980333117,21.840180870861,9.85539261585705,84.3215399441759,33.3185953516798,107.400935135926,114.36064947079,111.110668000139,71.0648765866664,25.3941180641306,27.2775304833012,20.4936953215997,30.2813352519863,24.3820307087204,5.09610479413291,0,14.0719176657289,12.6679932737549,12.1325866803548,53.4380557085201,41.9479371508418,52.9938436461424,26.1962843416865,35.0135300058962,31.8249386213361,41.4487261519712,31.2785960980975,66.1006270394093,11.3709685157812,257.531454674363,29.1921482143459,29.9268672402707,32.9053862505986,28.6076399349781,44.7340226923493,36.5975996264434,32.2547928492721,28.1002760729451,29.4745206284564,38.3937747835781,35.452593353385,36.0995440965623,23.7900313465686,10.4293112253677,23.292458905765,18.4115129277838,32.6227229958509,27.2565321953833,15.0722258498468,30.9773356819132,33.3594041132451,46.2972082950243,19.9084277732937,22.7603083389138,22.5077662256687,23.6606564002073,18.3018182717072,29.4661556655155,25.1120621820073,39.5816157230694,15.5208954911646,16.6413350547681,21.6419882721657,15.1245055375027,24.7462051810782,21.2433821578522,25.516984914585,20.8985980159418,56.1770549850588,41.4330130454691,34.0996199274711,26.9263504296152,35.6479611171266,38.5332811526572,38.5893919003893,38.5657894224912,45.2002640760018,55.1105449058467,49.8988526603292,58.3826711835847,57.7605073196316,100.798822944564,95.7422640736556,109.94239054385,124.484915370026,117.430616415325,26.9171134162083,15.9502149187891,32.0506219494284,29.618463466317,19.4092307987063,19.2756437644164,22.036335886078,28.6390604965146,24.6839628667806,31.5774539346848,20.404749646414,25.8577358916697,24.6308504624264,24.2726895890204,26.5151158482003,18.8752075817387,31.7722933315801,34.0531577264968,12.5180814629034,21.9357144210679,22.5415471346161,25.4564159806643,22.304536024277,19.6380295692892,30.9859031908861,52.5492126807384,56.5195420228949,57.1328868957936,99.9045353283692,26.8620620202911,33.2184701741313,31.4806957338795,32.8633396649375,32.3177394068239,38.7031294707758,39.4143708307611,46.5328100844352,77.426318519039,74.7594673942244,81.1267265917337,84.5622094140459,117.449178245407,127.372163600558,99.865808922217,28.0824849053239,20.0860896476714,15.8076027148765,19.5206848641466,25.5812370634467,20.6032696653433,21.6619713206272,13.8544889979037,30.7388531007072,22.8108630338238,21.5263937687608,25.0710871515079,24.6939524068231,25.3135852517645,18.0949540727127,10.8781136763742,57.5364199432272,50.2204878274613,37.8899392371189,36.5700462167674,32.4591191845817,79.5283420693775,22.7165917979705,28.8924670779512,22.8348801596767,19.1175038362042,20.943075363745,15.5692091933858,20.2405350837447,17.82760733259,27.2748566783101,26.66966926301,35.0592010464423,11.7523298420388,14.985600260529,24.5805483229078,57.080409486184,21.3646959816384,19.9533547596736,41.8703277058094,17.4228116799656,30.4360796464488,19.3821219876166,27.6285634402904,32.4412614330096,45.1932563848217,40.0590712584995,53.6304824890572,45.9593467767614,24.6683698822895,11.2542054890996,19.2903331528433,27.4877362145524,19.4422011186257,24.6823530903181,10.0473433207818,19.9470951854154,19.0648863777438,31.9766177179695,22.7543029059242,26.9645592582162,29.6136461397245,25.4263092726681,19.8610488691524,24.4843902769075,43.7603712744803,22.7258271461144,23.7344898157706,26.6680119412385,22.6042148405629,21.1876052967589,19.9037010689675,25.3267860690844,25.8910186798767,24.5995953371874,65.8722726430428,17.3984796469624,21.7551829825728,25.7052711155887,23.2088008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| |||
|short_description=p1@Hibch | |||
}} |
Revision as of 20:30, 13 September 2013
Short description: | p1@Hibch |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hibch_5end |
Coexpression cluster: | MCL_coexpression_mm9:1752 |
Association with transcript: | 0bp_to_ENSMUST00000044478, ENSMUST00000161125, NM_146108, uc007ayp.1, uc011wkr.1_5end |
EntrezGene: | Hibch |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.42e-13 | 47 |
exocrine gland | 1.00e-09 | 25 |
exocrine system | 1.00e-09 | 25 |
trunk mesenchyme | 2.26e-09 | 45 |
mesenchyme | 1.03e-08 | 61 |
entire embryonic mesenchyme | 1.03e-08 | 61 |
digestive tract diverticulum | 1.22e-08 | 23 |
sac | 1.22e-08 | 23 |
liver | 2.82e-08 | 22 |
epithelial sac | 2.82e-08 | 22 |
digestive gland | 2.82e-08 | 22 |
epithelium of foregut-midgut junction | 2.82e-08 | 22 |
anatomical boundary | 2.82e-08 | 22 |
hepatobiliary system | 2.82e-08 | 22 |
foregut-midgut junction | 2.82e-08 | 22 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
septum transversum | 2.82e-08 | 22 |
liver bud | 2.82e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.