FFCP PHASE1:Mm9::chr1:52874582..52874622,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16329|HGNC=|UniProt=P49442|association_with_transcript=-50bp_to_ENSMUST00000027271,NM_008384,uc007ayo.2_5end|description=CAGE_peak_2_at_Inpp1_5end|id=chr1:52874582..52874622,-|ontology_enrichment_celltype=CL:0000393!8.40e-08!39;CL:0000211!8.40e-08!39;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0000393,8.75e-08,39;CL:0000211,8.75e-08,39;CL:0000540,4.04e-07,33;CL:0000047,4.04e-07,33;CL:0000031,4.04e-07,33;CL:0000404,4.04e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.70e-10!73;UBERON:0005743!1.70e-10!73;UBERON:0000073!9.07e-10!75;UBERON:0001016!9.07e-10!75;UBERON:0004121!6.25e-08!102;UBERON:0000924!6.25e-08!102;UBERON:0006601!6.25e-08!102;UBERON:0002346!2.52e-07!71;UBERON:0003075!2.52e-07!71;UBERON:0007284!2.52e-07!71;UBERON:0007811!8.83e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.74e-10,73;UBERON:0001016,9.26e-10,75;UBERON:0004121,6.70e-08,95;UBERON:0000924,6.70e-08,95;UBERON:0006601,6.70e-08,95;UBERON:0002346,1.71e-07,64;UBERON:0003075,1.71e-07,64;UBERON:0007284,1.71e-07,64|phase1_expression=3.84357233051505,4.53668029931169,6.3699893514535,2.41971369045464,4.00716583957078,1.34303417529512,1.16806320297763,5.68142623142936,2.111830832275,2.10658073689794,1.19852577757853,0.319088635981346,5.30722262786738,3.84649770643589,0.333109761815663,1.21485160433896,0.699561878128147,2.99689057090326,2.60517423850904,1.69755860719212,1.7008658030214,1.58865521921416,1.04479915655574,1.43993180514066,1.60586496747019,3.44539178469012,4.30761996159075,1.50829862880122,1.71021077510736,2.01624103807945,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,15.9042019680025,7.813353445238,8.89990364755457,22.3527965451785,17.7591826089196,12.62326917881,5.5394599909254,5.77848507951233,4.03802854755699,1.56478268869608,3.70642765846759,2.41654801007919,1.94429899074283,1.39986421625363,0,1.34226084846189,4.35217285206807,2.35265659399725,2.82985379639542,3.72493471920384,1.54701627683233,3.84401275633236,2.64495489636016,3.80298842103708,3.72728985276045,1.77858959222228,3.5995988691256,1.97773272513395,9.2362414942993,5.39280198933128,2.68952813725088,1.24427534770173,1.75507719831198,1.68259969081106,5.42736870367227,5.52171352379034,0.857435594504678,2.01275489138296,4.5960939330501,8.8092704799511,5.36286819957788,5.52983519722476,4.2203612073662,4.20843160571084,2.6045668527838,9.49222196604695,9.56696437053856,6.1119299110724,5.00868595305235,5.69486723196412,3.54158947068071,1.36307147999731,2.19157524309678,4.34796733052517,1.72084775396277,0,0.539703191637817,1.29955283489534,1.34408066129201,1.40444420131752,6.13549161281008,3.89679006904303,2.47337702157238,6.05626705039726,5.13305909657271,7.64415719119937,28.4426681261332,0.432982082022428,1.77351905832569,1.01104889002957,2.74041311325744,3.6251303710604,3.56261133755579,2.77576522825817,2.43572382649713,2.7673859670727,2.41156224884196,3.88042733547826,1.63366568728578,0.988779870937496,2.31358971071859,2.65383165584962,2.75003644910596,1.76673214768315,3.39412677194655,0,8.78342391034641,10.6817820474862,1.02182822083437,2.75574786363617,1.79970819298022,1.52484272487678,7.9389038884556,8.23501085073528,3.01570445070875,6.08385120672968,7.16003280524926,5.40248915854856,6.32740925964255,2.54598409625791,2.61254638281195,3.0326731012041,3.36706969418358,1.82168620147785,4.36813998423599,1.80062129805349,3.61691562805716,5.03470093719826,3.71529788826064,2.71735001223214,8.01980449290949,1.94011193639558,3.78212160335639,1.75951124163949,1.53437012699302,1.39023624612799,2.43776516565517,2.26360350048738,1.79130840136644,1.40442637462647,0,1.70498099637356,2.48550927042602,2.34526059981096,2.52086886045421,2.84093682702252,0.983821158737019,2.46827380619805,2.55787339225449,1.07309360559848,1.98501082024188,1.81015834904829,3.77585167381919,2.67527071501324,1.16959989940266,2.63460138349261,2.54992195644706,4.6263788684108,2.77842453424068,4.29544417878937,3.70230793328962,1.91959425481711,2.32236671860439,1.80414445850931,2.62188582010345,4.89231696458715,4.94586627892654,3.32170343081158,10.0466362381647,8.29406189040889,5.76973768919337,5.65395852645448,1.79763881730844,2.16138049874694,3.98282546508734,2.65535061334314,2.05647322697512,5.63538678365402,1.22190796707189,1.55161989734101,4.20814919341911,2.27651533647326,1.03327103585722,2.98297582898612,1.97435462274881,1.1858105083486,0.83422552858047,1.17935397067922,0.899448449539415,0.811440485554012,2.17059443777175,3.56476192493988,2.87696137450811,3.40483976227574,3.0201755450689,5.75072826109418,2.23284568601102,3.12037673114561,1.26289438973556,1.97337154874103,1.4473305640901,3.32555742299888,2.27389694124582,1.46668478797823,1.52770577197669,1.64283173801951,2.01007508930179,1.19021820443007,1.75620283072019,2.83743259391144,2.6575762757853,1.91345722388985,2.29408640602033,2.762959709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| ||
|EntrezGene=16329 | |||
|HGNC= | |||
|UniProt=P49442 | |||
|association_with_transcript=-50bp_to_ENSMUST00000027271,NM_008384,uc007ayo.2_5end | |||
|description=CAGE_peak_2_at_Inpp1_5end | |||
|id=chr1:52874582..52874622,- | |||
|ontology_enrichment_celltype=CL:0000393!8.40e-08!39;CL:0000211!8.40e-08!39;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.75e-08,39;CL:0000211,8.75e-08,39;CL:0000540,4.04e-07,33;CL:0000047,4.04e-07,33;CL:0000031,4.04e-07,33;CL:0000404,4.04e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.70e-10!73;UBERON:0005743!1.70e-10!73;UBERON:0000073!9.07e-10!75;UBERON:0001016!9.07e-10!75;UBERON:0004121!6.25e-08!102;UBERON:0000924!6.25e-08!102;UBERON:0006601!6.25e-08!102;UBERON:0002346!2.52e-07!71;UBERON:0003075!2.52e-07!71;UBERON:0007284!2.52e-07!71;UBERON:0007811!8.83e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.74e-10,73;UBERON:0001016,9.26e-10,75;UBERON:0004121,6.70e-08,95;UBERON:0000924,6.70e-08,95;UBERON:0006601,6.70e-08,95;UBERON:0002346,1.71e-07,64;UBERON:0003075,1.71e-07,64;UBERON:0007284,1.71e-07,64 | |||
|phase1_expression=3.84357233051505,4.53668029931169,6.3699893514535,2.41971369045464,4.00716583957078,1.34303417529512,1.16806320297763,5.68142623142936,2.111830832275,2.10658073689794,1.19852577757853,0.319088635981346,5.30722262786738,3.84649770643589,0.333109761815663,1.21485160433896,0.699561878128147,2.99689057090326,2.60517423850904,1.69755860719212,1.7008658030214,1.58865521921416,1.04479915655574,1.43993180514066,1.60586496747019,3.44539178469012,4.30761996159075,1.50829862880122,1.71021077510736,2.01624103807945,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,15.9042019680025,7.813353445238,8.89990364755457,22.3527965451785,17.7591826089196,12.62326917881,5.5394599909254,5.77848507951233,4.03802854755699,1.56478268869608,3.70642765846759,2.41654801007919,1.94429899074283,1.39986421625363,0,1.34226084846189,4.35217285206807,2.35265659399725,2.82985379639542,3.72493471920384,1.54701627683233,3.84401275633236,2.64495489636016,3.80298842103708,3.72728985276045,1.77858959222228,3.5995988691256,1.97773272513395,9.2362414942993,5.39280198933128,2.68952813725088,1.24427534770173,1.75507719831198,1.68259969081106,5.42736870367227,5.52171352379034,0.857435594504678,2.01275489138296,4.5960939330501,8.8092704799511,5.36286819957788,5.52983519722476,4.2203612073662,4.20843160571084,2.6045668527838,9.49222196604695,9.56696437053856,6.1119299110724,5.00868595305235,5.69486723196412,3.54158947068071,1.36307147999731,2.19157524309678,4.34796733052517,1.72084775396277,0,0.539703191637817,1.29955283489534,1.34408066129201,1.40444420131752,6.13549161281008,3.89679006904303,2.47337702157238,6.05626705039726,5.13305909657271,7.64415719119937,28.4426681261332,0.432982082022428,1.77351905832569,1.01104889002957,2.74041311325744,3.6251303710604,3.56261133755579,2.77576522825817,2.43572382649713,2.7673859670727,2.41156224884196,3.88042733547826,1.63366568728578,0.988779870937496,2.31358971071859,2.65383165584962,2.75003644910596,1.76673214768315,3.39412677194655,0,8.78342391034641,10.6817820474862,1.02182822083437,2.75574786363617,1.79970819298022,1.52484272487678,7.9389038884556,8.23501085073528,3.01570445070875,6.08385120672968,7.16003280524926,5.40248915854856,6.32740925964255,2.54598409625791,2.61254638281195,3.0326731012041,3.36706969418358,1.82168620147785,4.36813998423599,1.80062129805349,3.61691562805716,5.03470093719826,3.71529788826064,2.71735001223214,8.01980449290949,1.94011193639558,3.78212160335639,1.75951124163949,1.53437012699302,1.39023624612799,2.43776516565517,2.26360350048738,1.79130840136644,1.40442637462647,0,1.70498099637356,2.48550927042602,2.34526059981096,2.52086886045421,2.84093682702252,0.983821158737019,2.46827380619805,2.55787339225449,1.07309360559848,1.98501082024188,1.81015834904829,3.77585167381919,2.67527071501324,1.16959989940266,2.63460138349261,2.54992195644706,4.6263788684108,2.77842453424068,4.29544417878937,3.70230793328962,1.91959425481711,2.32236671860439,1.80414445850931,2.62188582010345,4.89231696458715,4.94586627892654,3.32170343081158,10.0466362381647,8.29406189040889,5.76973768919337,5.65395852645448,1.79763881730844,2.16138049874694,3.98282546508734,2.65535061334314,2.05647322697512,5.63538678365402,1.22190796707189,1.55161989734101,4.20814919341911,2.27651533647326,1.03327103585722,2.98297582898612,1.97435462274881,1.1858105083486,0.83422552858047,1.17935397067922,0.899448449539415,0.811440485554012,2.17059443777175,3.56476192493988,2.87696137450811,3.40483976227574,3.0201755450689,5.75072826109418,2.23284568601102,3.12037673114561,1.26289438973556,1.97337154874103,1.4473305640901,3.32555742299888,2.27389694124582,1.46668478797823,1.52770577197669,1.64283173801951,2.01007508930179,1.19021820443007,1.75620283072019,2.83743259391144,2.6575762757853,1.91345722388985,2.29408640602033,2.76295970985433,3.03763023021174,1.50791283939272,2.71952841909355,0.983528546038072,1.65562047782839,6.42202359951168,7.14991288212439,1.47541450839008,1.26235463602186,3.47059041357882,4.29482618726302,4.95473814785438,6.69112634267146,7.5751549188014,7.07691326972081,8.09621403349789,4.09158201075837,7.11518000303742,6.42642632843614,2.83880170416537,1.95872164033981,3.90928702448583,3.62934270539578,1.32745138339963,0.971122544619926,2.41858845571801,2.26326095707078,1.47650946440386,3.07435147943927,4.39328098385976,1.81766864738753,4.9909632973861,2.21225730555071,2.10837217149998,2.06271086496374,7.14923172082955,1.26042765821917,0.905510786479282,2.35770738534752,3.19212420556092,4.28085162244969,2.79733335023606,2.43571959291679,1.17335854031855,0.21183207086382,0.882113592219848,2.14352128823924,3.22928853391811,1.5078231232039,2.02932984805332,1.80554989719567,5.53813589596716,7.04616147639937,2.39219233116994,2.47664241555867,2.77791791054568,0.565105371014073,3.00727300986255,2.0590035588587,3.56954702987096,2.51912614182584,3.73139929271944,0,2.05618395827738,2.43983360552218,2.48412283890143,1.88179466413022,2.18362563746178,2.02296519577231,2.644910583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| |||
|short_description=p2@Inpp1 | |||
}} |
Revision as of 20:30, 13 September 2013
Short description: | p2@Inpp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Inpp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENSMUST00000027271, NM_008384, uc007ayo.2_5end |
EntrezGene: | Inpp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.75e-08 | 39 |
electrically active cell | 8.75e-08 | 39 |
neuron | 4.04e-07 | 33 |
neuronal stem cell | 4.04e-07 | 33 |
neuroblast | 4.04e-07 | 33 |
electrically signaling cell | 4.04e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.74e-10 | 73 |
nervous system | 9.26e-10 | 75 |
ectoderm-derived structure | 6.70e-08 | 95 |
ectoderm | 6.70e-08 | 95 |
presumptive ectoderm | 6.70e-08 | 95 |
neurectoderm | 1.71e-07 | 64 |
neural plate | 1.71e-07 | 64 |
presumptive neural plate | 1.71e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.