FFCP PHASE1:Hg19::chr6:32815862..32815867,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=43|TSSclassifier=N|UniProt=|association_with_transcript=139bp_to_ENST00000487296_5end|coexpression_cluster_id=C7|description=CAGE_peak_8_at_TAP1_5end|id=chr6:32815862..32815867,-|ontology_enrichment_celltype=CL:0000860!2.86e-13!45;CL:0002057!9.65e-13!42;CL:0002009!1.39e-12!65;CL:0002087!1.42e-12!119;CL:0002194!3.77e-12!63;CL:0000576!3.77e-12!63;CL:0000040!3.77e-12!63;CL:0000559!3.77e-12!63;CL:0000738!6.61e-12!140;CL:0002031!6.01e-11!124;CL:0000557!1.07e-10!71;CL:0000839!5.29e-10!70;CL:0000988!2.63e-09!182;CL:0000766!3.45e-09!76;CL:0000037!6.56e-08!172;CL:0000566!6.56e-08!172;CL:0002032!2.68e-07!165;CL:0000837!2.68e-07!165|ontology_enrichment_celltype_v019=CL:0000860;2.25e-34;33!CL:0002057;2.25e-34;33!CL:0000473;9.62e-29;39!CL:0000234;9.62e-29;39!CL:0000576;1.29e-19;48!CL:0000766;1.12e-11;69!CL:0000763;9.75e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,2.57e-32,48;CL:0000234,2.57e-32,48;CL:0000860,1.41e-30,42;CL:0002057,1.41e-30,42;CL:0002194,1.25e-25,59;CL:0000576,1.25e-25,59;CL:0000040,1.25e-25,59;CL:0000559,1.25e-25,59;CL:0002009,9.12e-25,61;CL:0000839,7.84e-23,66;CL:0000557,1.77e-22,67;CL:0000766,7.37e-21,72;CL:0000763,1.46e-13,108;CL:0000049,1.46e-13,108;CL:0002087,1.15e-12,115;CL:0002031,4.33e-12,120;CL:0000738,1.59e-10,136;CL:0000988,2.21e-09,177;CL:0002032,1.08e-08,161;CL:0000837,1.08e-08,161;CL:0000037,2.83e-08,168|ontology_enrichment_development_v019=CL:0002057;2.32e-23;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.80e-13!102;UBERON:0003061!8.80e-13!102;UBERON:0002193!1.11e-12!112;UBERON:0002371!3.37e-09!80;UBERON:0001474!1.54e-08!86;UBERON:0002405!1.62e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-19,76;UBERON:0001474,3.35e-18,82;UBERON:0002390,4.98e-18,98;UBERON:0003061,4.98e-18,98;UBERON:0004765,1.71e-16,90;UBERON:0002193,2.99e-16,108;UBERON:0002405,6.29e-16,93;UBERON:0001434,9.75e-15,100;UBERON:0003081,1.51e-09,203;UBERON:0002204,2.48e-08,167|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.464858073811369,0.411167888021826,0.309706370895104,5.75384784644301,1.7931249457037,4.25668013799453,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0,3.95821560224059,1.99463657621632,1.70489900213078,0.870627715885752,0,0,3.76872997885115,1.0429658368404,1.52032191293582,0.605399502633369,0,1.58231193720442,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0.651844533267181,0,0,1.00269411196656,0.294605907474837,0.221533894583621,0.270803863765016,0.896639238079726,0.390178042679635,0.657751618414705,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=43 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=139bp_to_ENST00000487296_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_8_at_TAP1_5end | |||
|id=chr6:32815862..32815867,- | |||
|ontology_enrichment_celltype=CL:0000860!2.86e-13!45;CL:0002057!9.65e-13!42;CL:0002009!1.39e-12!65;CL:0002087!1.42e-12!119;CL:0002194!3.77e-12!63;CL:0000576!3.77e-12!63;CL:0000040!3.77e-12!63;CL:0000559!3.77e-12!63;CL:0000738!6.61e-12!140;CL:0002031!6.01e-11!124;CL:0000557!1.07e-10!71;CL:0000839!5.29e-10!70;CL:0000988!2.63e-09!182;CL:0000766!3.45e-09!76;CL:0000037!6.56e-08!172;CL:0000566!6.56e-08!172;CL:0002032!2.68e-07!165;CL:0000837!2.68e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-34;33!CL:0002057;2.25e-34;33!CL:0000473;9.62e-29;39!CL:0000234;9.62e-29;39!CL:0000576;1.29e-19;48!CL:0000766;1.12e-11;69!CL:0000763;9.75e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.57e-32,48;CL:0000234,2.57e-32,48;CL:0000860,1.41e-30,42;CL:0002057,1.41e-30,42;CL:0002194,1.25e-25,59;CL:0000576,1.25e-25,59;CL:0000040,1.25e-25,59;CL:0000559,1.25e-25,59;CL:0002009,9.12e-25,61;CL:0000839,7.84e-23,66;CL:0000557,1.77e-22,67;CL:0000766,7.37e-21,72;CL:0000763,1.46e-13,108;CL:0000049,1.46e-13,108;CL:0002087,1.15e-12,115;CL:0002031,4.33e-12,120;CL:0000738,1.59e-10,136;CL:0000988,2.21e-09,177;CL:0002032,1.08e-08,161;CL:0000837,1.08e-08,161;CL:0000037,2.83e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.80e-13!102;UBERON:0003061!8.80e-13!102;UBERON:0002193!1.11e-12!112;UBERON:0002371!3.37e-09!80;UBERON:0001474!1.54e-08!86;UBERON:0002405!1.62e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-19,76;UBERON:0001474,3.35e-18,82;UBERON:0002390,4.98e-18,98;UBERON:0003061,4.98e-18,98;UBERON:0004765,1.71e-16,90;UBERON:0002193,2.99e-16,108;UBERON:0002405,6.29e-16,93;UBERON:0001434,9.75e-15,100;UBERON:0003081,1.51e-09,203;UBERON:0002204,2.48e-08,167 | |||
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|short_description=p8@TAP1 | |||
}} |
Revision as of 20:27, 13 September 2013
Short description: | p8@TAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TAP1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 139bp_to_ENST00000487296_5end |
EntrezGene: | TAP1 |
HGNC: | 43 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.57e-32 | 48 |
phagocyte | 2.57e-32 | 48 |
classical monocyte | 1.41e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-30 | 42 |
monopoietic cell | 1.25e-25 | 59 |
monocyte | 1.25e-25 | 59 |
monoblast | 1.25e-25 | 59 |
promonocyte | 1.25e-25 | 59 |
macrophage dendritic cell progenitor | 9.12e-25 | 61 |
myeloid lineage restricted progenitor cell | 7.84e-23 | 66 |
granulocyte monocyte progenitor cell | 1.77e-22 | 67 |
myeloid leukocyte | 7.37e-21 | 72 |
myeloid cell | 1.46e-13 | 108 |
common myeloid progenitor | 1.46e-13 | 108 |
nongranular leukocyte | 1.15e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.33e-12 | 120 |
leukocyte | 1.59e-10 | 136 |
hematopoietic cell | 2.21e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.08e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-08 | 161 |
hematopoietic stem cell | 2.83e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-19 | 76 |
bone element | 3.35e-18 | 82 |
hematopoietic system | 4.98e-18 | 98 |
blood island | 4.98e-18 | 98 |
skeletal element | 1.71e-16 | 90 |
hemolymphoid system | 2.99e-16 | 108 |
immune system | 6.29e-16 | 93 |
skeletal system | 9.75e-15 | 100 |
lateral plate mesoderm | 1.51e-09 | 203 |
musculoskeletal system | 2.48e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.