FFCP PHASE1:Hg19::chr6:32412734..32412747,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2813|description=CAGE_peak_at_chr6:32412734..32412747,+|id=chr6:32412734..32412747,+|ontology_enrichment_celltype=CL:0002009!7.17e-49!65;CL:0002194!7.29e-46!63;CL:0000576!7.29e-46!63;CL:0000040!7.29e-46!63;CL:0000559!7.29e-46!63;CL:0000557!2.46e-43!71;CL:0002057!6.35e-43!42;CL:0002087!1.99e-41!119;CL:0000738!3.66e-41!140;CL:0000839!1.09e-39!70;CL:0000860!3.46e-39!45;CL:0000766!4.54e-37!76;CL:0002031!2.57e-36!124;CL:0000037!1.48e-31!172;CL:0000566!1.48e-31!172;CL:0000988!9.35e-31!182;CL:0002032!2.13e-30!165;CL:0000837!2.13e-30!165;CL:0000763!1.79e-29!112;CL:0000049!1.79e-29!112;CL:0000990!8.39e-15!8;CL:0000451!1.16e-11!10;CL:0000840!4.28e-10!5;CL:0001029!4.28e-10!5;CL:0000453!1.52e-09!5;CL:0000945!7.34e-07!24;CL:0000826!7.34e-07!24|ontology_enrichment_celltype_v019=CL:0000860;2.93e-39;33!CL:0002057;2.93e-39;33!CL:0000453;4.03e-31;5!CL:0000473;7.67e-31;39!CL:0000234;7.67e-31;39!CL:0000576;1.49e-30;48!CL:0000990;1.09e-24;8!CL:0000451;4.16e-20;10!CL:0000766;1.80e-17;69!CL:0001014;2.00e-13;2!CL:0001016;2.00e-13;2!CL:0000738;2.32e-10;136!CL:0000840;4.82e-10;5!CL:0002619;4.87e-09;3!CL:0000763;2.45e-08;100!CL:0002087;2.29e-07;104|ontology_enrichment_celltype_v019_2=CL:0002009,9.59e-52,61;CL:0000557,9.24e-47,67;CL:0002194,1.89e-44,59;CL:0000576,1.89e-44,59;CL:0000040,1.89e-44,59;CL:0000559,1.89e-44,59;CL:0000473,1.76e-41,48;CL:0000234,1.76e-41,48;CL:0000839,2.44e-39,66;CL:0000860,8.78e-38,42;CL:0002057,8.78e-38,42;CL:0000766,9.72e-36,72;CL:0000763,1.04e-35,108;CL:0000049,1.04e-35,108;CL:0000453,2.62e-31,5;CL:0000738,9.07e-30,136;CL:0000990,8.58e-25,8;CL:0002032,2.35e-24,161;CL:0000837,2.35e-24,161;CL:0002031,3.53e-24,120;CL:0000037,3.98e-23,168;CL:0002087,4.48e-23,115;CL:0000988,1.10e-21,177;CL:0000451,3.41e-20,10;CL:0001014,1.25e-13,2;CL:0001016,1.25e-13,2;CL:0000840,3.96e-10,5;CL:0001029,3.96e-10,5;CL:0002619,3.82e-09,3;CL:0000134,3.71e-08,354;CL:0002320,6.83e-08,361;CL:0000219,5.84e-07,386|ontology_enrichment_development_v019=CL:0002057;2.76e-26;42!CL:0000049;8.61e-10;108!UBERON:0001045;3.10e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;1.03e-07;1|ontology_enrichment_disease_v019_2=DOID:12603,1.03e-07,1|ontology_enrichment_uberon=UBERON:0002390!7.29e-50!102;UBERON:0003061!7.29e-50!102;UBERON:0002193!7.95e-47!112;UBERON:0002371!3.72e-38!80;UBERON:0001474!2.50e-34!86;UBERON:0002405!8.27e-34!115;UBERON:0004765!8.63e-27!101;UBERON:0001434!8.63e-27!101;UBERON:0003081!5.32e-18!216;UBERON:0007023!1.61e-14!115;UBERON:0002204!1.74e-11!167;UBERON:0000178!8.05e-07!15;UBERON:0000179!8.05e-07!15;UBERON:0000463!8.05e-07!15|ontology_enrichment_uberon_v019=UBERON:0002171;1.47e-07;1!UBERON:0006518;1.47e-07;1!UBERON:0008949;1.47e-07;1!UBERON:0000101;1.47e-07;1!UBERON:0002167;1.47e-07;1!UBERON:0001154;3.10e-07;1!UBERON:0001153;3.10e-07;1!UBERON:0009854;3.10e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.70e-41,76;UBERON:0001474,1.89e-37,82;UBERON:0002390,1.40e-36,98;UBERON:0003061,1.40e-36,98;UBERON:0004765,9.77e-34,90;UBERON:0002193,9.21e-33,108;UBERON:0002405,1.66e-32,93;UBERON:0001434,6.39e-30,100;UBERON:0002204,4.66e-16,167;UBERON:0003081,4.03e-15,203;UBERON:0000926,6.34e-08,315;UBERON:0004120,6.34e-08,315;UBERON:0006603,6.34e-08,315;UBERON:0002384,1.57e-07,371;UBERON:0002171,1.83e-07,1;UBERON:0006518,1.83e-07,1;UBERON:0008949,1.83e-07,1;UBERON:0000101,1.83e-07,1;UBERON:0002167,1.83e-07,1;UBERON:0001154,3.62e-07,1;UBERON:0001153,3.62e-07,1;UBERON:0001045,3.62e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0.464448369948228,0,0,0,0,0.284338464974843,0,0,0.601633342410425,0.651032612147555,0.671746422719773,2.26725566213286,1.80302897343931,0.436194716338694,0.755751887377619,0.727752183563449,2.32429036905685,1.6446715520873,0.309706370895104,1.7261543539329,0.768482119587302,2.36482229888585,1.37898272294647,0.645484683583826,0,0.564727018627814,1.36453075028923,2.9214052977861,1.53041946185451,2.88836124368484,0.639337125799041,0.989553900560148,0.997318288108159,0.426224750532694,0.580418477257168,2.8369261234557,0.622822248995575,1.50749199154046,1.5644487552606,1.52032191293582,0,2.20966581592539,4.1140110367315,1.26753171787165,0.637812899895131,0.628975936525128,1.01095768031846,0.600707571366025,0.964353520182481,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,6.44280028007289,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59078990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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2813 | |||
|description=CAGE_peak_at_chr6:32412734..32412747,+ | |||
|id=chr6:32412734..32412747,+ | |||
|ontology_enrichment_celltype=CL:0002009!7.17e-49!65;CL:0002194!7.29e-46!63;CL:0000576!7.29e-46!63;CL:0000040!7.29e-46!63;CL:0000559!7.29e-46!63;CL:0000557!2.46e-43!71;CL:0002057!6.35e-43!42;CL:0002087!1.99e-41!119;CL:0000738!3.66e-41!140;CL:0000839!1.09e-39!70;CL:0000860!3.46e-39!45;CL:0000766!4.54e-37!76;CL:0002031!2.57e-36!124;CL:0000037!1.48e-31!172;CL:0000566!1.48e-31!172;CL:0000988!9.35e-31!182;CL:0002032!2.13e-30!165;CL:0000837!2.13e-30!165;CL:0000763!1.79e-29!112;CL:0000049!1.79e-29!112;CL:0000990!8.39e-15!8;CL:0000451!1.16e-11!10;CL:0000840!4.28e-10!5;CL:0001029!4.28e-10!5;CL:0000453!1.52e-09!5;CL:0000945!7.34e-07!24;CL:0000826!7.34e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.93e-39;33!CL:0002057;2.93e-39;33!CL:0000453;4.03e-31;5!CL:0000473;7.67e-31;39!CL:0000234;7.67e-31;39!CL:0000576;1.49e-30;48!CL:0000990;1.09e-24;8!CL:0000451;4.16e-20;10!CL:0000766;1.80e-17;69!CL:0001014;2.00e-13;2!CL:0001016;2.00e-13;2!CL:0000738;2.32e-10;136!CL:0000840;4.82e-10;5!CL:0002619;4.87e-09;3!CL:0000763;2.45e-08;100!CL:0002087;2.29e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,9.59e-52,61;CL:0000557,9.24e-47,67;CL:0002194,1.89e-44,59;CL:0000576,1.89e-44,59;CL:0000040,1.89e-44,59;CL:0000559,1.89e-44,59;CL:0000473,1.76e-41,48;CL:0000234,1.76e-41,48;CL:0000839,2.44e-39,66;CL:0000860,8.78e-38,42;CL:0002057,8.78e-38,42;CL:0000766,9.72e-36,72;CL:0000763,1.04e-35,108;CL:0000049,1.04e-35,108;CL:0000453,2.62e-31,5;CL:0000738,9.07e-30,136;CL:0000990,8.58e-25,8;CL:0002032,2.35e-24,161;CL:0000837,2.35e-24,161;CL:0002031,3.53e-24,120;CL:0000037,3.98e-23,168;CL:0002087,4.48e-23,115;CL:0000988,1.10e-21,177;CL:0000451,3.41e-20,10;CL:0001014,1.25e-13,2;CL:0001016,1.25e-13,2;CL:0000840,3.96e-10,5;CL:0001029,3.96e-10,5;CL:0002619,3.82e-09,3;CL:0000134,3.71e-08,354;CL:0002320,6.83e-08,361;CL:0000219,5.84e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-26;42!CL:0000049;8.61e-10;108!UBERON:0001045;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.03e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.29e-50!102;UBERON:0003061!7.29e-50!102;UBERON:0002193!7.95e-47!112;UBERON:0002371!3.72e-38!80;UBERON:0001474!2.50e-34!86;UBERON:0002405!8.27e-34!115;UBERON:0004765!8.63e-27!101;UBERON:0001434!8.63e-27!101;UBERON:0003081!5.32e-18!216;UBERON:0007023!1.61e-14!115;UBERON:0002204!1.74e-11!167;UBERON:0000178!8.05e-07!15;UBERON:0000179!8.05e-07!15;UBERON:0000463!8.05e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.47e-07;1!UBERON:0006518;1.47e-07;1!UBERON:0008949;1.47e-07;1!UBERON:0000101;1.47e-07;1!UBERON:0002167;1.47e-07;1!UBERON:0001154;3.10e-07;1!UBERON:0001153;3.10e-07;1!UBERON:0009854;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.70e-41,76;UBERON:0001474,1.89e-37,82;UBERON:0002390,1.40e-36,98;UBERON:0003061,1.40e-36,98;UBERON:0004765,9.77e-34,90;UBERON:0002193,9.21e-33,108;UBERON:0002405,1.66e-32,93;UBERON:0001434,6.39e-30,100;UBERON:0002204,4.66e-16,167;UBERON:0003081,4.03e-15,203;UBERON:0000926,6.34e-08,315;UBERON:0004120,6.34e-08,315;UBERON:0006603,6.34e-08,315;UBERON:0002384,1.57e-07,371;UBERON:0002171,1.83e-07,1;UBERON:0006518,1.83e-07,1;UBERON:0008949,1.83e-07,1;UBERON:0000101,1.83e-07,1;UBERON:0002167,1.83e-07,1;UBERON:0001154,3.62e-07,1;UBERON:0001153,3.62e-07,1;UBERON:0001045,3.62e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0.464448369948228,0,0,0,0,0.284338464974843,0,0,0.601633342410425,0.651032612147555,0.671746422719773,2.26725566213286,1.80302897343931,0.436194716338694,0.755751887377619,0.727752183563449,2.32429036905685,1.6446715520873,0.309706370895104,1.7261543539329,0.768482119587302,2.36482229888585,1.37898272294647,0.645484683583826,0,0.564727018627814,1.36453075028923,2.9214052977861,1.53041946185451,2.88836124368484,0.639337125799041,0.989553900560148,0.997318288108159,0.426224750532694,0.580418477257168,2.8369261234557,0.622822248995575,1.50749199154046,1.5644487552606,1.52032191293582,0,2.20966581592539,4.1140110367315,1.26753171787165,0.637812899895131,0.628975936525128,1.01095768031846,0.600707571366025,0.964353520182481,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,6.44280028007289,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,3.04205544681009,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,1.66762242820452,3.70226045777575,0.648473311192717,0.540031437238115,0,0,0,0,3.34445715226294,0,0,0,0,0.383010740264733,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.370691816839509,0.522109747527277,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0.136203406111576,0,0,0,1.799791132412,6.96421759102155,0.0607495566580247,0,0.472834243795189,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0,2.07119527673598,0.496166021811951,0.197611631897944,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,4.67664741214532,6.51037717535479,1.4720885483026,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.455324382702595,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.773494655682926,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0.213233981900981,0,0.516711278688049,0.248298857183432,0,0.190941474834495,0,0,0,0.404112318087525,0.430333232356058,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr6:32412734..32412747,+ | |||
}} |
Revision as of 20:23, 13 September 2013
Short description: | p@chr6:32412734..32412747, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:32412734..32412747, + |
Coexpression cluster: | C2813_migratory_Dendritic_acute_immature_Whole_CD14_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.70e-41 | 76 |
bone element | 1.89e-37 | 82 |
hematopoietic system | 1.40e-36 | 98 |
blood island | 1.40e-36 | 98 |
skeletal element | 9.77e-34 | 90 |
hemolymphoid system | 9.21e-33 | 108 |
immune system | 1.66e-32 | 93 |
skeletal system | 6.39e-30 | 100 |
musculoskeletal system | 4.66e-16 | 167 |
lateral plate mesoderm | 4.03e-15 | 203 |
mesoderm | 6.34e-08 | 315 |
mesoderm-derived structure | 6.34e-08 | 315 |
presumptive mesoderm | 6.34e-08 | 315 |
connective tissue | 1.57e-07 | 371 |
lower lobe of right lung | 1.83e-07 | 1 |
right lung lobe | 1.83e-07 | 1 |
lower lobe of lung | 1.83e-07 | 1 |
lobe of lung | 1.83e-07 | 1 |
right lung | 1.83e-07 | 1 |
vermiform appendix | 3.62e-07 | 1 |
caecum | 3.62e-07 | 1 |
midgut | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.03e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.