FFCP PHASE1:Mm9::chr1:36329635..36329637,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=187|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:36329635..36329637,+|id=chr1:36329635..36329637,+|ontology_enrichment_celltype=CL:0000791!5.63e-22!9;CL:0000789!5.63e-22!9;CL:0002420!5.63e-22!9;CL:0002419!5.63e-22!9;CL:0000790!5.63e-22!9;CL:0000838!2.18e-21!12;CL:0000542!1.16e-19!13;CL:0000051!1.16e-19!13;CL:0000624!4.29e-18!8;CL:0000084!7.65e-18!11;CL:0000827!7.65e-18!11;CL:0002031!4.89e-15!25;CL:0000738!8.78e-15!17;CL:0002087!8.78e-15!17;CL:0000988!6.71e-14!32;CL:0002032!6.71e-14!32;CL:0000037!6.71e-14!32;CL:0000566!6.71e-14!32;CL:0000837!6.71e-14!32;CL:0000893!6.75e-11!6;CL:0002489!6.75e-11!6;CL:0000898!6.75e-11!6;CL:0000809!6.75e-11!6;CL:0000810!6.75e-11!6;CL:0000895!6.75e-11!6;CL:0000808!6.75e-11!6;CL:0000894!6.75e-11!6;CL:0000806!6.75e-11!6;CL:0000807!6.75e-11!6;CL:0000805!6.75e-11!6;CL:0002425!6.75e-11!6;CL:0002436!6.75e-11!6;CL:0002427!6.75e-11!6;CL:0002428!6.75e-11!6;CL:0002429!6.75e-11!6;CL:0002433!6.75e-11!6;CL:0002431!6.75e-11!6;CL:0002432!6.75e-11!6;CL:0000063!6.90e-10!66;CL:0002320!4.18e-09!46;CL:0000134!4.18e-09!46;CL:0000034!3.66e-08!97;CL:0000219!1.76e-07!54;CL:0000144!5.93e-07!121;CL:0000012!5.93e-07!121|ontology_enrichment_celltype_v019_2=CL:0000625,2.87e-30,1;CL:0000945,1.10e-29,1;CL:0000236,1.10e-29,1;CL:0000826,1.10e-29,1;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0000791,4.91e-14,9;CL:0000789,4.91e-14,9;CL:0002420,4.91e-14,9;CL:0002419,4.91e-14,9;CL:0000790,4.91e-14,9;CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.18e-09!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0.513602189793617,0.174840804837995,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:36329635..36329637,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=187 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:36329635..36329637,+ | |||
|id=chr1:36329635..36329637,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.63e-22!9;CL:0000789!5.63e-22!9;CL:0002420!5.63e-22!9;CL:0002419!5.63e-22!9;CL:0000790!5.63e-22!9;CL:0000838!2.18e-21!12;CL:0000542!1.16e-19!13;CL:0000051!1.16e-19!13;CL:0000624!4.29e-18!8;CL:0000084!7.65e-18!11;CL:0000827!7.65e-18!11;CL:0002031!4.89e-15!25;CL:0000738!8.78e-15!17;CL:0002087!8.78e-15!17;CL:0000988!6.71e-14!32;CL:0002032!6.71e-14!32;CL:0000037!6.71e-14!32;CL:0000566!6.71e-14!32;CL:0000837!6.71e-14!32;CL:0000893!6.75e-11!6;CL:0002489!6.75e-11!6;CL:0000898!6.75e-11!6;CL:0000809!6.75e-11!6;CL:0000810!6.75e-11!6;CL:0000895!6.75e-11!6;CL:0000808!6.75e-11!6;CL:0000894!6.75e-11!6;CL:0000806!6.75e-11!6;CL:0000807!6.75e-11!6;CL:0000805!6.75e-11!6;CL:0002425!6.75e-11!6;CL:0002436!6.75e-11!6;CL:0002427!6.75e-11!6;CL:0002428!6.75e-11!6;CL:0002429!6.75e-11!6;CL:0002433!6.75e-11!6;CL:0002431!6.75e-11!6;CL:0002432!6.75e-11!6;CL:0000063!6.90e-10!66;CL:0002320!4.18e-09!46;CL:0000134!4.18e-09!46;CL:0000034!3.66e-08!97;CL:0000219!1.76e-07!54;CL:0000144!5.93e-07!121;CL:0000012!5.93e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.87e-30,1;CL:0000945,1.10e-29,1;CL:0000236,1.10e-29,1;CL:0000826,1.10e-29,1;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0000791,4.91e-14,9;CL:0000789,4.91e-14,9;CL:0002420,4.91e-14,9;CL:0002419,4.91e-14,9;CL:0000790,4.91e-14,9;CL:0000084,1.07e-11,11;CL:0000827,1.07e-11,11;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.18e-09!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0.513602189793617,0.174840804837995,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:36329635..36329637,+ | |||
}} |
Revision as of 20:16, 13 September 2013
Short description: | p@chr1:36329635..36329637, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:36329635..36329637, + |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.87e-30 | 1 |
lymphocyte of B lineage | 1.10e-29 | 1 |
B cell | 1.10e-29 | 1 |
pro-B cell | 1.10e-29 | 1 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
mature alpha-beta T cell | 4.91e-14 | 9 |
alpha-beta T cell | 4.91e-14 | 9 |
immature T cell | 4.91e-14 | 9 |
mature T cell | 4.91e-14 | 9 |
immature alpha-beta T cell | 4.91e-14 | 9 |
T cell | 1.07e-11 | 11 |
pro-T cell | 1.07e-11 | 11 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.