FFCP PHASE1:Mm9::chr1:173338341..173338353,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=250|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:173338341..173338353,+|id=chr1:173338341..173338353,+|ontology_enrichment_celltype=CL:0002031!8.20e-08!25;CL:0000988!5.95e-07!32;CL:0002032!5.95e-07!32;CL:0000037!5.95e-07!32;CL:0000566!5.95e-07!32;CL:0000837!5.95e-07!32;CL:0000738!9.42e-07!17;CL:0002087!9.42e-07!17|ontology_enrichment_celltype_v019_2=CL:0002476,4.53e-14,2;CL:0002194,1.78e-07,4;CL:0000766,1.78e-07,4;CL:0000234,1.78e-07,4;CL:0000576,1.78e-07,4;CL:0000235,1.78e-07,4;CL:0000864,1.78e-07,4;CL:0002009,1.78e-07,4;CL:0000040,1.78e-07,4;CL:0000559,1.78e-07,4;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.19e-16!45;UBERON:0003061!3.19e-16!45;UBERON:0002193!6.23e-16!48;UBERON:0004177!9.45e-14!29;UBERON:0002405!1.31e-12!70;UBERON:0003081!1.35e-09!88;UBERON:0005057!1.89e-09!51;UBERON:0002370!4.91e-09!23;UBERON:0000974!4.91e-09!23;UBERON:0004807!4.91e-09!23;UBERON:0005058!4.91e-09!23;UBERON:0003351!4.91e-09!23;UBERON:0009113!4.91e-09!23;UBERON:0003295!4.91e-09!23;UBERON:0009722!4.91e-09!23;UBERON:0005562!4.91e-09!23;UBERON:0007690!4.91e-09!23;UBERON:0006562!1.76e-08!24;UBERON:0003408!1.76e-08!24;UBERON:0001557!1.76e-08!24;UBERON:0001042!1.76e-08!24;UBERON:0008814!1.76e-08!24;UBERON:0009145!1.76e-08!24;UBERON:0000072!4.48e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-08,45;UBERON:0003061,3.37e-08,45;UBERON:0002193,1.23e-07,48;UBERON:0002405,1.23e-07,48|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.174840804837995,0,0.607425802169478,0,0.473193248037357,0.548457734422955,0.84877930359606,0.0850432901510698,0,0.783599367416806,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,3.39857247121808,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.810676133875177,0.274561413188081,10.0637744569148,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0.956859594047176,0.457556346413045,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0.718976700153791,0.649604114888975,0,0.198681354781265,1.20195449519969,0.738447635872886,1.51449674922221,1.295515713135,2.52065462842101,1.75424185331554,0.962118416403295,0.935015217452552,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr1:173338341..173338353,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=250 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:173338341..173338353,+ | |||
|id=chr1:173338341..173338353,+ | |||
|ontology_enrichment_celltype=CL:0002031!8.20e-08!25;CL:0000988!5.95e-07!32;CL:0002032!5.95e-07!32;CL:0000037!5.95e-07!32;CL:0000566!5.95e-07!32;CL:0000837!5.95e-07!32;CL:0000738!9.42e-07!17;CL:0002087!9.42e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,4.53e-14,2;CL:0002194,1.78e-07,4;CL:0000766,1.78e-07,4;CL:0000234,1.78e-07,4;CL:0000576,1.78e-07,4;CL:0000235,1.78e-07,4;CL:0000864,1.78e-07,4;CL:0002009,1.78e-07,4;CL:0000040,1.78e-07,4;CL:0000559,1.78e-07,4;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-16!45;UBERON:0003061!3.19e-16!45;UBERON:0002193!6.23e-16!48;UBERON:0004177!9.45e-14!29;UBERON:0002405!1.31e-12!70;UBERON:0003081!1.35e-09!88;UBERON:0005057!1.89e-09!51;UBERON:0002370!4.91e-09!23;UBERON:0000974!4.91e-09!23;UBERON:0004807!4.91e-09!23;UBERON:0005058!4.91e-09!23;UBERON:0003351!4.91e-09!23;UBERON:0009113!4.91e-09!23;UBERON:0003295!4.91e-09!23;UBERON:0009722!4.91e-09!23;UBERON:0005562!4.91e-09!23;UBERON:0007690!4.91e-09!23;UBERON:0006562!1.76e-08!24;UBERON:0003408!1.76e-08!24;UBERON:0001557!1.76e-08!24;UBERON:0001042!1.76e-08!24;UBERON:0008814!1.76e-08!24;UBERON:0009145!1.76e-08!24;UBERON:0000072!4.48e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-08,45;UBERON:0003061,3.37e-08,45;UBERON:0002193,1.23e-07,48;UBERON:0002405,1.23e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.174840804837995,0,0.607425802169478,0,0.473193248037357,0.548457734422955,0.84877930359606,0.0850432901510698,0,0.783599367416806,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,3.39857247121808,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.810676133875177,0.274561413188081,10.0637744569148,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0.956859594047176,0.457556346413045,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0.718976700153791,0.649604114888975,0,0.198681354781265,1.20195449519969,0.738447635872886,1.51449674922221,1.295515713135,2.52065462842101,1.75424185331554,0.962118416403295,0.935015217452552,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:173338341..173338353,+ | |||
}} |
Revision as of 19:41, 13 September 2013
Short description: | p@chr1:173338341..173338353, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173338341..173338353, + |
Coexpression cluster: | MCL_coexpression_mm9:250 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 4.53e-14 | 2 |
monopoietic cell | 1.78e-07 | 4 |
myeloid leukocyte | 1.78e-07 | 4 |
phagocyte | 1.78e-07 | 4 |
monocyte | 1.78e-07 | 4 |
macrophage | 1.78e-07 | 4 |
tissue-resident macrophage | 1.78e-07 | 4 |
macrophage dendritic cell progenitor | 1.78e-07 | 4 |
monoblast | 1.78e-07 | 4 |
promonocyte | 1.78e-07 | 4 |
lymphocyte of B lineage | 2.37e-07 | 1 |
B cell | 2.37e-07 | 1 |
pro-B cell | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.37e-08 | 45 |
blood island | 3.37e-08 | 45 |
hemolymphoid system | 1.23e-07 | 48 |
immune system | 1.23e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.