FFCP PHASE1:Hg19::chr6:24495348..24495380,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2822|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4459|TSSclassifier=S|UniProt=|association_with_transcript=46bp_to_ENST00000475417_5end|coexpression_cluster_id=C1129|description=CAGE_peak_5_at_GPLD1_5end|id=chr6:24495348..24495380,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;1.09e-13;13|ontology_enrichment_celltype_v019_2=CL:0000136,9.66e-12,15|ontology_enrichment_development_v019=UBERON:0006215;2.26e-21;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.09e-41!115;UBERON:0001049!1.75e-37!57;UBERON:0005068!1.75e-37!57;UBERON:0006241!1.75e-37!57;UBERON:0007135!1.75e-37!57;UBERON:0002616!9.41e-32!59;UBERON:0003080!2.44e-29!42;UBERON:0000955!2.94e-28!69;UBERON:0006238!2.94e-28!69;UBERON:0001950!6.76e-28!20;UBERON:0002780!7.32e-28!41;UBERON:0001890!7.32e-28!41;UBERON:0006240!7.32e-28!41;UBERON:0002619!9.24e-28!22;UBERON:0001017!2.43e-27!82;UBERON:0005743!6.82e-27!86;UBERON:0001893!1.14e-25!34;UBERON:0001869!1.71e-25!32;UBERON:0002020!2.47e-25!34;UBERON:0003528!2.47e-25!34;UBERON:0002791!3.01e-24!33;UBERON:0000956!9.33e-24!25;UBERON:0000203!9.33e-24!25;UBERON:0000073!4.66e-23!94;UBERON:0001016!4.66e-23!94;UBERON:0003075!4.76e-23!86;UBERON:0007284!4.76e-23!86;UBERON:0002346!8.96e-23!90;UBERON:0003056!1.13e-18!61;UBERON:0000153!2.67e-15!129;UBERON:0007811!2.67e-15!129;UBERON:0000033!3.90e-14!123;UBERON:0000200!2.89e-11!6;UBERON:0001871!5.09e-11!7;UBERON:0000025!2.20e-10!194;UBERON:0000924!2.25e-09!173;UBERON:0006601!2.25e-09!173;UBERON:0004121!3.01e-09!169;UBERON:0003076!3.34e-09!15;UBERON:0003057!3.34e-09!15;UBERON:0002021!4.13e-09!5;UBERON:0004111!1.62e-08!241;UBERON:0000477!2.37e-08!286;UBERON:0004733!1.13e-07!12;UBERON:0002028!1.13e-07!12;UBERON:0007277!1.13e-07!12;UBERON:0004732!5.89e-07!13|ontology_enrichment_uberon_v019=UBERON:0001950;3.61e-61;20!UBERON:0002619;1.26e-55;22!UBERON:0000956;6.53e-49;25!UBERON:0000203;6.53e-49;25!UBERON:0001893;5.31e-38;34!UBERON:0001869;2.03e-37;32!UBERON:0002791;6.61e-33;32!UBERON:0003528;8.11e-31;34!UBERON:0002020;8.11e-31;34!UBERON:0000200;3.77e-28;6!UBERON:0002780;2.97e-25;41!UBERON:0001890;2.97e-25;41!UBERON:0001871;4.02e-24;6!UBERON:0000073;5.81e-22;53!UBERON:0002616;5.81e-22;53!UBERON:0002771;1.36e-14;2!UBERON:0000955;4.58e-14;68!UBERON:0002021;2.78e-13;5!UBERON:0001872;4.04e-13;5!UBERON:0001017;1.03e-12;75!UBERON:0002037;5.72e-11;6!UBERON:0001016;1.13e-10;83!UBERON:0001870;4.94e-10;3!UBERON:0002902;1.57e-08;1!UBERON:0009899;1.57e-08;1!UBERON:0002581;3.82e-08;1!UBERON:0002022;3.82e-08;1!UBERON:0003112;3.82e-08;1!UBERON:0011158;3.82e-08;1!UBERON:0007190;3.82e-08;1!UBERON:0003128;3.82e-08;1!UBERON:0001703;3.82e-08;1!UBERON:0002241;3.82e-08;1!UBERON:0007023;7.96e-08;114!UBERON:0002680;1.81e-07;9!UBERON:0001895;1.81e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.39e-61,20;UBERON:0002619,5.26e-56,22;UBERON:0000956,3.03e-49,25;UBERON:0000203,3.03e-49,25;UBERON:0001869,5.94e-44,32;UBERON:0000073,3.07e-42,53;UBERON:0002616,3.07e-42,53;UBERON:0001893,2.80e-41,34;UBERON:0001049,7.95e-40,56;UBERON:0005068,7.95e-40,56;UBERON:0006241,7.95e-40,56;UBERON:0007135,7.95e-40,56;UBERON:0002780,1.20e-38,41;UBERON:0001890,1.20e-38,41;UBERON:0003080,1.20e-38,41;UBERON:0006240,1.20e-38,41;UBERON:0002791,3.02e-38,32;UBERON:0003528,6.54e-36,34;UBERON:0002020,6.54e-36,34;UBERON:0000955,9.32e-32,68;UBERON:0006238,9.32e-32,68;UBERON:0000200,1.80e-28,6;UBERON:0001017,3.27e-26,81;UBERON:0003075,3.27e-26,82;UBERON:0007284,3.27e-26,82;UBERON:0003056,3.45e-25,61;UBERON:0002346,7.74e-25,86;UBERON:0001871,5.41e-24,6;UBERON:0001016,2.74e-23,89;UBERON:0007023,1.49e-22,114;UBERON:0010371,5.98e-20,104;UBERON:0010314,8.01e-17,132;UBERON:0002771,1.37e-14,2;UBERON:0001872,2.08e-13,5;UBERON:0002021,2.46e-13,5;UBERON:0000025,1.01e-11,192;UBERON:0002037,4.59e-11,6;UBERON:0006215,4.59e-11,6;UBERON:0004121,1.42e-10,171;UBERON:0000924,1.42e-10,171;UBERON:0006601,1.42e-10,171;UBERON:0001870,2.98e-10,3;UBERON:0011216,2.29e-09,223;UBERON:0004111,1.40e-08,240;UBERON:0002902,1.75e-08,1;UBERON:0009899,1.75e-08,1;UBERON:0002581,2.02e-08,1;UBERON:0003112,3.33e-08,1;UBERON:0011158,3.33e-08,1;UBERON:0003128,3.33e-08,1;UBERON:0001703,3.33e-08,1;UBERON:0002241,3.33e-08,1;UBERON:0004761,3.33e-08,1;UBERON:0009617,3.33e-08,1;UBERON:0002022,4.72e-08,1;UBERON:0007190,5.07e-08,1;UBERON:0002680,1.57e-07,9;UBERON:0001895,1.57e-07,9;UBERON:0010092,1.57e-07,9|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4459 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENST00000475417_5end | |||
|coexpression_cluster_id=C1129 | |||
|description=CAGE_peak_5_at_GPLD1_5end | |||
|id=chr6:24495348..24495380,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.09e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.66e-12,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.26e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.09e-41!115;UBERON:0001049!1.75e-37!57;UBERON:0005068!1.75e-37!57;UBERON:0006241!1.75e-37!57;UBERON:0007135!1.75e-37!57;UBERON:0002616!9.41e-32!59;UBERON:0003080!2.44e-29!42;UBERON:0000955!2.94e-28!69;UBERON:0006238!2.94e-28!69;UBERON:0001950!6.76e-28!20;UBERON:0002780!7.32e-28!41;UBERON:0001890!7.32e-28!41;UBERON:0006240!7.32e-28!41;UBERON:0002619!9.24e-28!22;UBERON:0001017!2.43e-27!82;UBERON:0005743!6.82e-27!86;UBERON:0001893!1.14e-25!34;UBERON:0001869!1.71e-25!32;UBERON:0002020!2.47e-25!34;UBERON:0003528!2.47e-25!34;UBERON:0002791!3.01e-24!33;UBERON:0000956!9.33e-24!25;UBERON:0000203!9.33e-24!25;UBERON:0000073!4.66e-23!94;UBERON:0001016!4.66e-23!94;UBERON:0003075!4.76e-23!86;UBERON:0007284!4.76e-23!86;UBERON:0002346!8.96e-23!90;UBERON:0003056!1.13e-18!61;UBERON:0000153!2.67e-15!129;UBERON:0007811!2.67e-15!129;UBERON:0000033!3.90e-14!123;UBERON:0000200!2.89e-11!6;UBERON:0001871!5.09e-11!7;UBERON:0000025!2.20e-10!194;UBERON:0000924!2.25e-09!173;UBERON:0006601!2.25e-09!173;UBERON:0004121!3.01e-09!169;UBERON:0003076!3.34e-09!15;UBERON:0003057!3.34e-09!15;UBERON:0002021!4.13e-09!5;UBERON:0004111!1.62e-08!241;UBERON:0000477!2.37e-08!286;UBERON:0004733!1.13e-07!12;UBERON:0002028!1.13e-07!12;UBERON:0007277!1.13e-07!12;UBERON:0004732!5.89e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.61e-61;20!UBERON:0002619;1.26e-55;22!UBERON:0000956;6.53e-49;25!UBERON:0000203;6.53e-49;25!UBERON:0001893;5.31e-38;34!UBERON:0001869;2.03e-37;32!UBERON:0002791;6.61e-33;32!UBERON:0003528;8.11e-31;34!UBERON:0002020;8.11e-31;34!UBERON:0000200;3.77e-28;6!UBERON:0002780;2.97e-25;41!UBERON:0001890;2.97e-25;41!UBERON:0001871;4.02e-24;6!UBERON:0000073;5.81e-22;53!UBERON:0002616;5.81e-22;53!UBERON:0002771;1.36e-14;2!UBERON:0000955;4.58e-14;68!UBERON:0002021;2.78e-13;5!UBERON:0001872;4.04e-13;5!UBERON:0001017;1.03e-12;75!UBERON:0002037;5.72e-11;6!UBERON:0001016;1.13e-10;83!UBERON:0001870;4.94e-10;3!UBERON:0002902;1.57e-08;1!UBERON:0009899;1.57e-08;1!UBERON:0002581;3.82e-08;1!UBERON:0002022;3.82e-08;1!UBERON:0003112;3.82e-08;1!UBERON:0011158;3.82e-08;1!UBERON:0007190;3.82e-08;1!UBERON:0003128;3.82e-08;1!UBERON:0001703;3.82e-08;1!UBERON:0002241;3.82e-08;1!UBERON:0007023;7.96e-08;114!UBERON:0002680;1.81e-07;9!UBERON:0001895;1.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.39e-61,20;UBERON:0002619,5.26e-56,22;UBERON:0000956,3.03e-49,25;UBERON:0000203,3.03e-49,25;UBERON:0001869,5.94e-44,32;UBERON:0000073,3.07e-42,53;UBERON:0002616,3.07e-42,53;UBERON:0001893,2.80e-41,34;UBERON:0001049,7.95e-40,56;UBERON:0005068,7.95e-40,56;UBERON:0006241,7.95e-40,56;UBERON:0007135,7.95e-40,56;UBERON:0002780,1.20e-38,41;UBERON:0001890,1.20e-38,41;UBERON:0003080,1.20e-38,41;UBERON:0006240,1.20e-38,41;UBERON:0002791,3.02e-38,32;UBERON:0003528,6.54e-36,34;UBERON:0002020,6.54e-36,34;UBERON:0000955,9.32e-32,68;UBERON:0006238,9.32e-32,68;UBERON:0000200,1.80e-28,6;UBERON:0001017,3.27e-26,81;UBERON:0003075,3.27e-26,82;UBERON:0007284,3.27e-26,82;UBERON:0003056,3.45e-25,61;UBERON:0002346,7.74e-25,86;UBERON:0001871,5.41e-24,6;UBERON:0001016,2.74e-23,89;UBERON:0007023,1.49e-22,114;UBERON:0010371,5.98e-20,104;UBERON:0010314,8.01e-17,132;UBERON:0002771,1.37e-14,2;UBERON:0001872,2.08e-13,5;UBERON:0002021,2.46e-13,5;UBERON:0000025,1.01e-11,192;UBERON:0002037,4.59e-11,6;UBERON:0006215,4.59e-11,6;UBERON:0004121,1.42e-10,171;UBERON:0000924,1.42e-10,171;UBERON:0006601,1.42e-10,171;UBERON:0001870,2.98e-10,3;UBERON:0011216,2.29e-09,223;UBERON:0004111,1.40e-08,240;UBERON:0002902,1.75e-08,1;UBERON:0009899,1.75e-08,1;UBERON:0002581,2.02e-08,1;UBERON:0003112,3.33e-08,1;UBERON:0011158,3.33e-08,1;UBERON:0003128,3.33e-08,1;UBERON:0001703,3.33e-08,1;UBERON:0002241,3.33e-08,1;UBERON:0004761,3.33e-08,1;UBERON:0009617,3.33e-08,1;UBERON:0002022,4.72e-08,1;UBERON:0007190,5.07e-08,1;UBERON:0002680,1.57e-07,9;UBERON:0001895,1.57e-07,9;UBERON:0010092,1.57e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0.780103689942349,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0.63337622438398,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,2.87506075821184,1.18219047581419,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0,0,0,0,1.15424157650247,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.146552233678082,2.65013777824443,0.517131825446202,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,5.98419583706421,5.2644877744767,5.82056595850577,2.29510841496863,0,0.886068179966986,1.09823638411767,1.752673029891,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0.642292250964595,1.41696576325585,2.39450788585727,0.205116364240755,0.504143392443436,2.21303207885497,1.29180516505481,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,1.14813893851271,0.781078098613847,3.51367554052013,1.64881106504158,0,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,0,0,0.0887023701626388,0,0,0.475788130837822,1.84163765975977,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0.872701380680755,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.310298987585686,0.213233981900981,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p5@GPLD1 | |||
}} |
Revision as of 19:40, 13 September 2013
Short description: | p5@GPLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GPLD1_5end |
Coexpression cluster: | C1129_mature_hippocampus_spinal_substantia_corpus_thalamus_breast |
Association with transcript: | 46bp_to_ENST00000475417_5end |
EntrezGene: | GPLD1 |
HGNC: | 4459 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.66e-12 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.