FFCP PHASE1:Mm9::chr1:166561874..166561885,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=815|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:166561874..166561885,+|id=chr1:166561874..166561885,+|ontology_enrichment_celltype=CL:0000680!1.19e-10!6;CL:0000183!1.19e-10!6;CL:0000187!1.19e-10!6;CL:0000056!1.19e-10!6;CL:0000222!5.77e-09!7|ontology_enrichment_celltype_v019_2=CL:0000680,4.99e-14,6;CL:0000187,4.99e-14,6;CL:0000056,4.99e-14,6;CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0000222,4.06e-12,7;CL:0000355,1.46e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!7.29e-08!4;UBERON:0001637!7.29e-08!4;UBERON:0003509!7.29e-08!4;UBERON:0004573!7.29e-08!4;UBERON:0004571!7.29e-08!4;UBERON:0010191!7.29e-08!4;UBERON:0004572!7.29e-08!4;UBERON:0002329!4.58e-07!11;UBERON:0003077!4.58e-07!11;UBERON:0003059!4.58e-07!11;UBERON:0007282!4.58e-07!11;UBERON:0009618!4.58e-07!11;UBERON:0007285!4.58e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.27e-20,4;UBERON:0001637,1.27e-20,4;UBERON:0004573,1.27e-20,4;UBERON:0003509,1.27e-20,4;UBERON:0004571,1.27e-20,4;UBERON:0010191,1.27e-20,4;UBERON:0004572,1.27e-20,4;UBERON:0000055,1.21e-16,5;UBERON:0007500,1.21e-16,5;UBERON:0001981,1.21e-16,5;UBERON:0002049,1.21e-16,5;UBERON:0007798,1.21e-16,5;UBERON:0004537,1.21e-16,5;UBERON:0006965,1.21e-16,5;UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,2.93993100536592,0.734187008646726,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,1.03914401841148,1.06001872353102,0.422530259330042,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,1.01219549843938,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.325773918707152,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.709360934569094,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr1:166561874..166561885,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=815 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:166561874..166561885,+ | |||
|id=chr1:166561874..166561885,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.19e-10!6;CL:0000183!1.19e-10!6;CL:0000187!1.19e-10!6;CL:0000056!1.19e-10!6;CL:0000222!5.77e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.99e-14,6;CL:0000187,4.99e-14,6;CL:0000056,4.99e-14,6;CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0000222,4.06e-12,7;CL:0000355,1.46e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!7.29e-08!4;UBERON:0001637!7.29e-08!4;UBERON:0003509!7.29e-08!4;UBERON:0004573!7.29e-08!4;UBERON:0004571!7.29e-08!4;UBERON:0010191!7.29e-08!4;UBERON:0004572!7.29e-08!4;UBERON:0002329!4.58e-07!11;UBERON:0003077!4.58e-07!11;UBERON:0003059!4.58e-07!11;UBERON:0007282!4.58e-07!11;UBERON:0009618!4.58e-07!11;UBERON:0007285!4.58e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.27e-20,4;UBERON:0001637,1.27e-20,4;UBERON:0004573,1.27e-20,4;UBERON:0003509,1.27e-20,4;UBERON:0004571,1.27e-20,4;UBERON:0010191,1.27e-20,4;UBERON:0004572,1.27e-20,4;UBERON:0000055,1.21e-16,5;UBERON:0007500,1.21e-16,5;UBERON:0001981,1.21e-16,5;UBERON:0002049,1.21e-16,5;UBERON:0007798,1.21e-16,5;UBERON:0004537,1.21e-16,5;UBERON:0006965,1.21e-16,5;UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,2.93993100536592,0.734187008646726,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,1.03914401841148,1.06001872353102,0.422530259330042,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,1.01219549843938,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0,0,0,0.384341160854549,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.325773918707152,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.709360934569094,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr1:166561874..166561885,+ | |||
}} |
Revision as of 19:31, 13 September 2013
Short description: | p@chr1:166561874..166561885, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166561874..166561885, + |
Coexpression cluster: | MCL_coexpression_mm9:815 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.99e-14 | 6 |
muscle cell | 4.99e-14 | 6 |
myoblast | 4.99e-14 | 6 |
smooth muscle cell | 3.66e-13 | 3 |
vascular associated smooth muscle cell | 3.66e-13 | 3 |
aortic smooth muscle cell | 3.66e-13 | 3 |
smooth muscle myoblast | 3.66e-13 | 3 |
mesodermal cell | 4.06e-12 | 7 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.27e-20 | 4 |
artery | 1.27e-20 | 4 |
systemic artery | 1.27e-20 | 4 |
arterial blood vessel | 1.27e-20 | 4 |
systemic arterial system | 1.27e-20 | 4 |
aortic system | 1.27e-20 | 4 |
arterial system | 1.27e-20 | 4 |
vessel | 1.21e-16 | 5 |
epithelial tube open at both ends | 1.21e-16 | 5 |
blood vessel | 1.21e-16 | 5 |
vasculature | 1.21e-16 | 5 |
vascular system | 1.21e-16 | 5 |
blood vasculature | 1.21e-16 | 5 |
vascular cord | 1.21e-16 | 5 |
smooth muscle tissue | 3.66e-13 | 3 |
blood vessel smooth muscle | 3.66e-13 | 3 |
arterial system smooth muscle | 3.66e-13 | 3 |
artery smooth muscle tissue | 3.66e-13 | 3 |
aorta smooth muscle tissue | 3.66e-13 | 3 |
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.