FFCP PHASE1:Mm9::chr1:163081115..163081119,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=60|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:163081115..163081119,+|id=chr1:163081115..163081119,+|ontology_enrichment_celltype=CL:0000117!2.17e-11!23;CL:0000337!2.17e-11!23;CL:0000540!6.90e-08!33;CL:0000047!6.90e-08!33;CL:0000031!6.90e-08!33;CL:0000404!6.90e-08!33;CL:0000221!7.27e-08!44;CL:0000133!7.27e-08!44;CL:0002319!8.08e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.40e-13,23;CL:0000337,5.40e-13,23;CL:0000540,3.53e-07,33;CL:0000047,3.53e-07,33;CL:0000031,3.53e-07,33;CL:0000404,3.53e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.84e-28!71;UBERON:0003075!3.84e-28!71;UBERON:0007284!3.84e-28!71;UBERON:0001049!7.59e-26!52;UBERON:0005068!7.59e-26!52;UBERON:0006241!7.59e-26!52;UBERON:0007135!7.59e-26!52;UBERON:0001017!2.92e-25!73;UBERON:0005743!2.92e-25!73;UBERON:0000073!7.48e-25!75;UBERON:0001016!7.48e-25!75;UBERON:0000955!8.03e-25!50;UBERON:0006238!8.03e-25!50;UBERON:0000033!1.14e-24!63;UBERON:0002616!5.08e-24!49;UBERON:0003056!5.27e-23!49;UBERON:0004121!7.95e-22!102;UBERON:0000924!7.95e-22!102;UBERON:0006601!7.95e-22!102;UBERON:0003080!3.77e-21!40;UBERON:0002780!2.05e-20!39;UBERON:0001890!2.05e-20!39;UBERON:0006240!2.05e-20!39;UBERON:0002020!4.41e-19!34;UBERON:0002791!8.22e-17!29;UBERON:0003528!8.22e-17!29;UBERON:0001893!8.22e-17!29;UBERON:0000956!4.54e-12!21;UBERON:0001869!4.54e-12!21;UBERON:0000203!4.54e-12!21;UBERON:0000025!2.09e-11!114;UBERON:0007811!2.27e-11!86;UBERON:0000153!1.42e-10!94;UBERON:0002619!5.87e-10!17;UBERON:0004111!7.35e-10!122;UBERON:0002021!9.09e-08!10;UBERON:0000411!9.09e-08!10;UBERON:0001950!9.09e-08!10;UBERON:0000468!9.12e-08!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-32,54;UBERON:0002346,1.20e-31,64;UBERON:0003075,1.20e-31,64;UBERON:0007284,1.20e-31,64;UBERON:0001049,2.41e-31,52;UBERON:0005068,2.41e-31,52;UBERON:0006241,2.41e-31,52;UBERON:0007135,2.41e-31,52;UBERON:0000955,2.19e-28,47;UBERON:0006238,2.19e-28,47;UBERON:0001017,9.18e-28,73;UBERON:0002616,2.12e-27,46;UBERON:0010314,7.64e-27,92;UBERON:0003056,8.86e-27,49;UBERON:0001016,2.39e-26,75;UBERON:0003080,4.17e-25,40;UBERON:0010371,1.05e-24,73;UBERON:0002780,3.42e-24,39;UBERON:0001890,3.42e-24,39;UBERON:0006240,3.42e-24,39;UBERON:0002020,1.66e-22,34;UBERON:0004121,1.72e-22,95;UBERON:0000924,1.72e-22,95;UBERON:0006601,1.72e-22,95;UBERON:0003528,1.15e-19,29;UBERON:0002791,1.15e-19,29;UBERON:0001893,1.15e-19,29;UBERON:0000956,8.92e-14,21;UBERON:0001869,8.92e-14,21;UBERON:0000203,8.92e-14,21;UBERON:0000025,2.30e-11,114;UBERON:0002619,3.74e-11,17;UBERON:0002021,2.60e-09,10;UBERON:0000411,2.60e-09,10;UBERON:0001950,2.60e-09,10;UBERON:0004111,3.09e-09,122;UBERON:0002420,4.22e-07,8;UBERON:0007245,4.22e-07,8;UBERON:0010009,4.22e-07,8;UBERON:0010011,4.22e-07,8;UBERON:0000454,4.22e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.51497892375155,1.94429899074283,0.839918529752175,0,0,0,0,0,0,0,7.48570905180512,10.5798195854407,5.07065122804943,0,0,0,0,0,1.19840044207362,5.76327457982332,3.7328260431052,5.8052553482627,6.73039876324422,4.57041575046086,6.18431914664518,5.38959516545798,2.77951865952885,0.919218786610021,1.10115880999389,17.1101033034152,10.1380311949121,7.91317726381163,8.78281378583133,11.4600941522487,8.09630697104005,7.87867654044352,9.32069311438542,1.76777151284201,8.96941589034349,8.94717339961443,0.227178579999552,0.755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,3.56261133755579,0.867426633830679,0.913396434936424,1.61430848079241,2.41156224884196,1.05829836422134,0.753999547978053,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0,0,8.19786231632332,7.12118803165747,0,0,0,0,21.4200614348896,21.5025283324754,16.8376831831238,29.550134432687,23.7815375317207,22.0255327233134,15.0884374653015,0.81471491080253,0.124406970610093,0,0.631325567659422,2.34216797332867,1.14951052216736,1.62055916824814,3.0140963567143,2.4493139694478,1.7935920839879,2.71735001223214,2.58703370739016,1.29340795759705,0.378212160335639,0.703804496655795,1.09597866213787,0.556094498451196,0.348252166522167,0,1.19420560091096,0,0,0,1.24275463521301,1.40715635988658,1.80062061461015,1.18372367792605,3.14822770795846,2.93107514486019,3.0229412817553,2.95100741539581,2.10177616260905,1.31647879930784,0.820837320395476,0.648550476366846,0.438599962275997,0.219550115291051,0.402619256281115,18.9260953707715,5.86556290561921,0.330418782983798,0,1.06644125267617,0,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,2.0863469104839,2.74196430263349,2.25415471346161,0.814605311381257,2.90928730751439,1.33258057791605,1.26473074248515,2.06654207171443,2.35498091762062,2.34454611451421,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,1.84753190166605,1.13694847062291,0.651859905768103,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0.390267295715598,1.10344600874334,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,1.15719246865209,0,0,0,0,11.559642479121,8.90808818100744,0,0,0.315508219416257,1.56175497718655,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,40.8078071855695,0.99358059645788,0.35613120733451,0.81443479676788,3.13443233647817,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,8.17055053809091,1.8006109403131,2.71653235943784,3.00071849044229,2.30542303734956,1.60531935841864,2.30368628842969,1.8267896946876,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0,0,10.7546675166096,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.01659733563424,0.756037385752609,0.627264888043406,0.436725127492355,0.134864346384821,0,0.26175594198403,0,0,59.7514515005242,1.04661582230785,0.496375471371293,0.972255941720238,0.904118764344118,0.844780627453891,0.352071715937262,1.3020438484395,2.09718688851422,16.6693043369944,50.4052510951265,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,8.471277639256,12.889106622201,11.4579102687879,17.7008777813998,14.3867329151835,15.8632718451837,15.5255175053315,22.0657389579868,24.469690085147,12.4262474820437,1.3492355185943,2.39414924040619,2.04880326904961,2.67417388775123,2.51535795153579,3.12533964365024,1.77797382241292,2.06035057238894,2.24643446714271,2.27427490587418,2.78827229879264,2.64076877940507,2.99652823903624,2.43295579138503,2.41228969613576,0.952587382566147,1.85414921511769,2.31491064556446,2.47251540481984,1.61918812147837,2.05721551431249,1.59728225543404,1.66905332963125,1.59881058295561,2.25862512996793,2.11536519729191,1.64635175585495,0,1.22223702461276,0.561142271657738,0.830445126869219,1.57607171800902,0.409231043169689,1.85924209423159,1.54325288784913,1.74867404556562,1.40358965067245,3.00819475667618,0.57386499620653,0,0|short_description=p@chr1:163081115..163081119,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:163081115..163081119,+ | |||
|id=chr1:163081115..163081119,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.17e-11!23;CL:0000337!2.17e-11!23;CL:0000540!6.90e-08!33;CL:0000047!6.90e-08!33;CL:0000031!6.90e-08!33;CL:0000404!6.90e-08!33;CL:0000221!7.27e-08!44;CL:0000133!7.27e-08!44;CL:0002319!8.08e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.40e-13,23;CL:0000337,5.40e-13,23;CL:0000540,3.53e-07,33;CL:0000047,3.53e-07,33;CL:0000031,3.53e-07,33;CL:0000404,3.53e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.84e-28!71;UBERON:0003075!3.84e-28!71;UBERON:0007284!3.84e-28!71;UBERON:0001049!7.59e-26!52;UBERON:0005068!7.59e-26!52;UBERON:0006241!7.59e-26!52;UBERON:0007135!7.59e-26!52;UBERON:0001017!2.92e-25!73;UBERON:0005743!2.92e-25!73;UBERON:0000073!7.48e-25!75;UBERON:0001016!7.48e-25!75;UBERON:0000955!8.03e-25!50;UBERON:0006238!8.03e-25!50;UBERON:0000033!1.14e-24!63;UBERON:0002616!5.08e-24!49;UBERON:0003056!5.27e-23!49;UBERON:0004121!7.95e-22!102;UBERON:0000924!7.95e-22!102;UBERON:0006601!7.95e-22!102;UBERON:0003080!3.77e-21!40;UBERON:0002780!2.05e-20!39;UBERON:0001890!2.05e-20!39;UBERON:0006240!2.05e-20!39;UBERON:0002020!4.41e-19!34;UBERON:0002791!8.22e-17!29;UBERON:0003528!8.22e-17!29;UBERON:0001893!8.22e-17!29;UBERON:0000956!4.54e-12!21;UBERON:0001869!4.54e-12!21;UBERON:0000203!4.54e-12!21;UBERON:0000025!2.09e-11!114;UBERON:0007811!2.27e-11!86;UBERON:0000153!1.42e-10!94;UBERON:0002619!5.87e-10!17;UBERON:0004111!7.35e-10!122;UBERON:0002021!9.09e-08!10;UBERON:0000411!9.09e-08!10;UBERON:0001950!9.09e-08!10;UBERON:0000468!9.12e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-32,54;UBERON:0002346,1.20e-31,64;UBERON:0003075,1.20e-31,64;UBERON:0007284,1.20e-31,64;UBERON:0001049,2.41e-31,52;UBERON:0005068,2.41e-31,52;UBERON:0006241,2.41e-31,52;UBERON:0007135,2.41e-31,52;UBERON:0000955,2.19e-28,47;UBERON:0006238,2.19e-28,47;UBERON:0001017,9.18e-28,73;UBERON:0002616,2.12e-27,46;UBERON:0010314,7.64e-27,92;UBERON:0003056,8.86e-27,49;UBERON:0001016,2.39e-26,75;UBERON:0003080,4.17e-25,40;UBERON:0010371,1.05e-24,73;UBERON:0002780,3.42e-24,39;UBERON:0001890,3.42e-24,39;UBERON:0006240,3.42e-24,39;UBERON:0002020,1.66e-22,34;UBERON:0004121,1.72e-22,95;UBERON:0000924,1.72e-22,95;UBERON:0006601,1.72e-22,95;UBERON:0003528,1.15e-19,29;UBERON:0002791,1.15e-19,29;UBERON:0001893,1.15e-19,29;UBERON:0000956,8.92e-14,21;UBERON:0001869,8.92e-14,21;UBERON:0000203,8.92e-14,21;UBERON:0000025,2.30e-11,114;UBERON:0002619,3.74e-11,17;UBERON:0002021,2.60e-09,10;UBERON:0000411,2.60e-09,10;UBERON:0001950,2.60e-09,10;UBERON:0004111,3.09e-09,122;UBERON:0002420,4.22e-07,8;UBERON:0007245,4.22e-07,8;UBERON:0010009,4.22e-07,8;UBERON:0010011,4.22e-07,8;UBERON:0000454,4.22e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.51497892375155,1.94429899074283,0.839918529752175,0,0,0,0,0,0,0,7.48570905180512,10.5798195854407,5.07065122804943,0,0,0,0,0,1.19840044207362,5.76327457982332,3.7328260431052,5.8052553482627,6.73039876324422,4.57041575046086,6.18431914664518,5.38959516545798,2.77951865952885,0.919218786610021,1.10115880999389,17.1101033034152,10.1380311949121,7.91317726381163,8.78281378583133,11.4600941522487,8.09630697104005,7.87867654044352,9.32069311438542,1.76777151284201,8.96941589034349,8.94717339961443,0.227178579999552,0.755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,3.56261133755579,0.867426633830679,0.913396434936424,1.61430848079241,2.41156224884196,1.05829836422134,0.753999547978053,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0,0,8.19786231632332,7.12118803165747,0,0,0,0,21.4200614348896,21.5025283324754,16.8376831831238,29.550134432687,23.7815375317207,22.0255327233134,15.0884374653015,0.81471491080253,0.124406970610093,0,0.631325567659422,2.34216797332867,1.14951052216736,1.62055916824814,3.0140963567143,2.4493139694478,1.7935920839879,2.71735001223214,2.58703370739016,1.29340795759705,0.378212160335639,0.703804496655795,1.09597866213787,0.556094498451196,0.348252166522167,0,1.19420560091096,0,0,0,1.24275463521301,1.40715635988658,1.80062061461015,1.18372367792605,3.14822770795846,2.93107514486019,3.0229412817553,2.95100741539581,2.10177616260905,1.31647879930784,0.820837320395476,0.648550476366846,0.438599962275997,0.219550115291051,0.402619256281115,18.9260953707715,5.86556290561921,0.330418782983798,0,1.06644125267617,0,0.38660238396628,0.201683524623343,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,2.0863469104839,2.74196430263349,2.25415471346161,0.814605311381257,2.90928730751439,1.33258057791605,1.26473074248515,2.06654207171443,2.35498091762062,2.34454611451421,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,1.84753190166605,1.13694847062291,0.651859905768103,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0.390267295715598,1.10344600874334,0.221464689648775,0.318909537314974,0.655453258862952,0.345369963731791,1.15719246865209,0,0,0,0,11.559642479121,8.90808818100744,0,0,0.315508219416257,1.56175497718655,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,40.8078071855695,0.99358059645788,0.35613120733451,0.81443479676788,3.13443233647817,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,8.17055053809091,1.8006109403131,2.71653235943784,3.00071849044229,2.30542303734956,1.60531935841864,2.30368628842969,1.8267896946876,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0,0,10.7546675166096,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.01659733563424,0.756037385752609,0.627264888043406,0.436725127492355,0.134864346384821,0,0.26175594198403,0,0,59.7514515005242,1.04661582230785,0.496375471371293,0.972255941720238,0.904118764344118,0.844780627453891,0.352071715937262,1.3020438484395,2.09718688851422,16.6693043369944,50.4052510951265,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,8.471277639256,12.889106622201,11.4579102687879,17.7008777813998,14.3867329151835,15.8632718451837,15.5255175053315,22.0657389579868,24.469690085147,12.4262474820437,1.3492355185943,2.39414924040619,2.04880326904961,2.67417388775123,2.51535795153579,3.12533964365024,1.77797382241292,2.06035057238894,2.24643446714271,2.27427490587418,2.78827229879264,2.64076877940507,2.99652823903624,2.43295579138503,2.41228969613576,0.952587382566147,1.85414921511769,2.31491064556446,2.47251540481984,1.61918812147837,2.05721551431249,1.59728225543404,1.66905332963125,1.59881058295561,2.25862512996793,2.11536519729191,1.64635175585495,0,1.22223702461276,0.561142271657738,0.830445126869219,1.57607171800902,0.409231043169689,1.85924209423159,1.54325288784913,1.74867404556562,1.40358965067245,3.00819475667618,0.57386499620653,0,0 | |||
|short_description=p@chr1:163081115..163081119,+ | |||
}} |
Revision as of 19:25, 13 September 2013
Short description: | p@chr1:163081115..163081119, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:163081115..163081119, + |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.40e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.40e-13 | 23 |
neuron | 3.53e-07 | 33 |
neuronal stem cell | 3.53e-07 | 33 |
neuroblast | 3.53e-07 | 33 |
electrically signaling cell | 3.53e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.