FFCP PHASE1:Mm9::chr1:156993885..156993919,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15064|HGNC=|MCL_coexpression_id=4|UniProt=Q8HWB0|association_with_transcript=0bp_to_ENSMUST00000027744,NM_008209,uc007day.1,uc007daz.1,uc007dba.1,uc011wtv.1_5end|description=CAGE_peak_2_at_Mr1_5end|id=chr1:156993885..156993919,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!7.94e-16!193;UBERON:0004120!7.94e-16!193;UBERON:0006603!7.94e-16!193;UBERON:0003104!1.02e-08!131;UBERON:0009142!1.02e-08!131;UBERON:0001048!1.84e-08!147;UBERON:0000464!4.64e-08!57;UBERON:0001004!6.88e-08!42;UBERON:0005156!8.99e-08!26;UBERON:0000990!8.99e-08!26;UBERON:0000065!9.45e-08!41;UBERON:0005153!1.80e-07!17;UBERON:0005157!5.50e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.01e-11,120;UBERON:0004120,7.01e-11,120;UBERON:0006603,7.01e-11,120;UBERON:0001004,2.96e-08,42;UBERON:0000065,4.10e-08,41;UBERON:0005156,7.01e-08,26;UBERON:0000990,7.01e-08,26;UBERON:0005153,1.78e-07,17;UBERON:0001048,3.15e-07,134;UBERON:0003133,9.48e-07,24|phase1_expression=1.44133962394315,0,0,0,0,0,0,5.16493293766305,1.267098499365,1.17032263160997,0,0,2.22560948910567,3.3219752919219,0.666219523631325,0.404950534779652,0.699561878128147,2.83915948822414,3.56497527374921,1.27316895539409,3.31668831589172,1.48936426801328,1.04479915655574,0.639969691173627,0.91763712426868,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,11.2048167998264,10.644577778049,11.9305388905093,0,0.218025156380447,1.09843091367236,0.972149495371417,0.839918529752175,1.43752564364972,0.838913030288682,0.725362142011344,1.00828139742739,2.57259436035947,6.87680255853016,2.57836046138721,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,3.9554654502679,0.7104801149461,0.898800331555214,3.84218305321555,0,0,0,0.856952953211411,0,0.122490799214954,0.383381884072945,0,0,0.766124028511126,1.68967186581868,0,0.182975287204819,0,1.67509799400829,3.93933827022176,2.44477196442896,0.883885756421003,1.70846016958924,0.186399445825301,0.530083353332288,3.70300644523249,4.92769630792852,1.72084775396277,1.3599426674155,3.77792234146472,0.649776417447669,1.34408066129201,5.33688796500657,7.83979483859066,3.63700406444016,3.18005617059306,4.78867627240714,2.56652954828636,2.54805239706646,0,1.08245520505607,0.506719730950197,0.505524445014783,3.9964357901671,9.83963957859253,11.2816025689267,1.73485326766136,2.43572382649713,1.84492397804847,4.22023393547343,5.52666923537813,6.40899615781345,0.741584903203122,11.423349196673,0,0.970601099684455,1.98757366614354,0.484875253135222,1.86391761218122,1.17112318804619,0.83778682725382,1.02182822083437,0.359445373517761,0,0.254140454146129,2.84602214869163,0.915001205637253,0.376963056338593,1.39059456153821,2.04572365864264,2.0778804455956,0.811206315338788,7.63795228877372,4.72746488318353,5.05445516867349,8.83855794723191,0.780722657776222,0.459804208866946,1.62055916824814,1.50704817835715,0.816437989815934,1.7935920839879,1.49922759295566,3.10444044886819,1.29340795759705,1.51284864134255,4.04687585577082,2.84954452155847,3.61461423993277,3.83077383174383,3.90986059175093,4.37875387000685,0,0.257347907114715,0.852490498186778,1.24275463521301,0.938104239924385,1.08037236876609,3.07768156260773,3.14822770795846,1.85120535464854,3.25547522650571,3.21928081679543,2.56883753207773,3.62031669809657,3.2833492815819,2.99954595319666,3.50879969820798,4.83010253640311,5.50246316917524,3.99550902271842,2.05809224758569,0.330418782983798,0.793351699990633,1.2797295032114,1.16118335930219,1.67527699718721,1.61346819698674,2.2237804384487,1.52180500890047,1.42358718463353,1.4822905925161,1.25667604400135,3.78017296878187,0.974820435595601,3.59527763461689,3.02593269824572,1.1948476395262,1.51734320762465,1.94222471436539,0,1.83286195060783,2.71533482034676,2.80543279561274,3.54124607895841,3.54264355151045,5.02395929092399,4.68909222902842,0.889357881261447,0.166845105716094,0.393117990226406,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,1.15078454980324,0.648540907100142,0.549122826376163,1.43768206527355,1.86070473834252,0.312037673114561,2.27320990152401,1.07638448113147,1.4473305640901,9.42241269849684,0.757965647081939,4.56301934037672,4.41337223015489,8.44884893838608,7.37027532743989,7.61739650835244,3.12213836572478,11.0344600874334,10.85176979279,10.2051051940792,9.01248230936559,8.63424909329478,8.67894351489069,0,4.35124547054968,6.88469982226651,3.86311444826625,1.76605648986571,1.28932855251423,9.01642199571715,7.06918596172244,0.94652465824877,0.780877488593277,1.29254038639679,0.716906393857656,1.11399337041197,0.566153061577665,3.23848561339915,0.876767573733936,0.790575555893047,2.57057053137446,12.0649072427028,3.5613120733451,1.95464351224291,17.8167732810338,3.98235415019888,1.21390318077491,1.209294227859,1.88605079755898,2.06711325016541,2.76691633149535,2.32585463851399,2.90826983582004,1.06949213515416,2.21225730555071,4.21674434299995,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| ||
|EntrezGene=15064 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=Q8HWB0 | |||
|association_with_transcript=0bp_to_ENSMUST00000027744,NM_008209,uc007day.1,uc007daz.1,uc007dba.1,uc011wtv.1_5end | |||
|description=CAGE_peak_2_at_Mr1_5end | |||
|id=chr1:156993885..156993919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!7.94e-16!193;UBERON:0004120!7.94e-16!193;UBERON:0006603!7.94e-16!193;UBERON:0003104!1.02e-08!131;UBERON:0009142!1.02e-08!131;UBERON:0001048!1.84e-08!147;UBERON:0000464!4.64e-08!57;UBERON:0001004!6.88e-08!42;UBERON:0005156!8.99e-08!26;UBERON:0000990!8.99e-08!26;UBERON:0000065!9.45e-08!41;UBERON:0005153!1.80e-07!17;UBERON:0005157!5.50e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.01e-11,120;UBERON:0004120,7.01e-11,120;UBERON:0006603,7.01e-11,120;UBERON:0001004,2.96e-08,42;UBERON:0000065,4.10e-08,41;UBERON:0005156,7.01e-08,26;UBERON:0000990,7.01e-08,26;UBERON:0005153,1.78e-07,17;UBERON:0001048,3.15e-07,134;UBERON:0003133,9.48e-07,24 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,5.16493293766305,1.267098499365,1.17032263160997,0,0,2.22560948910567,3.3219752919219,0.666219523631325,0.404950534779652,0.699561878128147,2.83915948822414,3.56497527374921,1.27316895539409,3.31668831589172,1.48936426801328,1.04479915655574,0.639969691173627,0.91763712426868,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,11.2048167998264,10.644577778049,11.9305388905093,0,0.218025156380447,1.09843091367236,0.972149495371417,0.839918529752175,1.43752564364972,0.838913030288682,0.725362142011344,1.00828139742739,2.57259436035947,6.87680255853016,2.57836046138721,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,3.9554654502679,0.7104801149461,0.898800331555214,3.84218305321555,0,0,0,0.856952953211411,0,0.122490799214954,0.383381884072945,0,0,0.766124028511126,1.68967186581868,0,0.182975287204819,0,1.67509799400829,3.93933827022176,2.44477196442896,0.883885756421003,1.70846016958924,0.186399445825301,0.530083353332288,3.70300644523249,4.92769630792852,1.72084775396277,1.3599426674155,3.77792234146472,0.649776417447669,1.34408066129201,5.33688796500657,7.83979483859066,3.63700406444016,3.18005617059306,4.78867627240714,2.56652954828636,2.54805239706646,0,1.08245520505607,0.506719730950197,0.505524445014783,3.9964357901671,9.83963957859253,11.2816025689267,1.73485326766136,2.43572382649713,1.84492397804847,4.22023393547343,5.52666923537813,6.40899615781345,0.741584903203122,11.423349196673,0,0.970601099684455,1.98757366614354,0.484875253135222,1.86391761218122,1.17112318804619,0.83778682725382,1.02182822083437,0.359445373517761,0,0.254140454146129,2.84602214869163,0.915001205637253,0.376963056338593,1.39059456153821,2.04572365864264,2.0778804455956,0.811206315338788,7.63795228877372,4.72746488318353,5.05445516867349,8.83855794723191,0.780722657776222,0.459804208866946,1.62055916824814,1.50704817835715,0.816437989815934,1.7935920839879,1.49922759295566,3.10444044886819,1.29340795759705,1.51284864134255,4.04687585577082,2.84954452155847,3.61461423993277,3.83077383174383,3.90986059175093,4.37875387000685,0,0.257347907114715,0.852490498186778,1.24275463521301,0.938104239924385,1.08037236876609,3.07768156260773,3.14822770795846,1.85120535464854,3.25547522650571,3.21928081679543,2.56883753207773,3.62031669809657,3.2833492815819,2.99954595319666,3.50879969820798,4.83010253640311,5.50246316917524,3.99550902271842,2.05809224758569,0.330418782983798,0.793351699990633,1.2797295032114,1.16118335930219,1.67527699718721,1.61346819698674,2.2237804384487,1.52180500890047,1.42358718463353,1.4822905925161,1.25667604400135,3.78017296878187,0.974820435595601,3.59527763461689,3.02593269824572,1.1948476395262,1.51734320762465,1.94222471436539,0,1.83286195060783,2.71533482034676,2.80543279561274,3.54124607895841,3.54264355151045,5.02395929092399,4.68909222902842,0.889357881261447,0.166845105716094,0.393117990226406,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,1.15078454980324,0.648540907100142,0.549122826376163,1.43768206527355,1.86070473834252,0.312037673114561,2.27320990152401,1.07638448113147,1.4473305640901,9.42241269849684,0.757965647081939,4.56301934037672,4.41337223015489,8.44884893838608,7.37027532743989,7.61739650835244,3.12213836572478,11.0344600874334,10.85176979279,10.2051051940792,9.01248230936559,8.63424909329478,8.67894351489069,0,4.35124547054968,6.88469982226651,3.86311444826625,1.76605648986571,1.28932855251423,9.01642199571715,7.06918596172244,0.94652465824877,0.780877488593277,1.29254038639679,0.716906393857656,1.11399337041197,0.566153061577665,3.23848561339915,0.876767573733936,0.790575555893047,2.57057053137446,12.0649072427028,3.5613120733451,1.95464351224291,17.8167732810338,3.98235415019888,1.21390318077491,1.209294227859,1.88605079755898,2.06711325016541,2.76691633149535,2.32585463851399,2.90826983582004,1.06949213515416,2.21225730555071,4.21674434299995,1.03135543248187,10.8940673841212,1.26042765821917,1.68166288917581,1.50035924522115,2.30542303734956,3.74574516964348,3.29098041204242,1.2178597964584,1.64270195644597,1.0591603543191,12.3495902910779,3.79238381765404,2.9063596805263,2.89502039655148,2.50681922406587,1.64140899745061,0.874442509889552,1.8542530201051,0.683483523191411,2.27025554759545,2.77791791054568,1.50694765603753,1.91371918809435,2.74533807847827,3.0596117398894,2.23922323717853,1.38199973804424,4.77335309007557,2.53068794864908,2.64315307264903,3.78018692876304,4.80903080833278,4.80397640241591,3.50647300600534,3.88471241909079,3.40282724579238,2.46268449254406,3.10669656543463,0.56369293868419,4.48549638131936,4.13646226142744,9.13920585217024,6.71631082084202,11.8269287843545,10.5621514781179,7.55185432094911,4.8235298435827,2.41584120826006,2.01621004380506,36.6572899928687,1.01362607645082,2.87590680061516,6.62596197186755,11.2786818270513,24.2391252833143,16.5869720337557,27.9133206359951,24.8377466872443,27.6630708157649,39.5238645736415,32.8433058092966,36.9453471898865,37.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| |||
|short_description=p2@Mr1 | |||
}} | |||
Revision as of 19:18, 13 September 2013
| Short description: | p2@Mr1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Mr1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:4 |
| Association with transcript: | 0bp_to_ENSMUST00000027744, NM_008209, uc007day.1, uc007daz.1, uc007dba.1, uc011wtv.1_5end |
| EntrezGene: | Mr1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 7.01e-11 | 120 |
| mesoderm-derived structure | 7.01e-11 | 120 |
| presumptive mesoderm | 7.01e-11 | 120 |
| respiratory system | 2.96e-08 | 42 |
| respiratory tract | 4.10e-08 | 41 |
| reproductive structure | 7.01e-08 | 26 |
| reproductive system | 7.01e-08 | 26 |
| epithelial bud | 1.78e-07 | 17 |
| primordium | 3.15e-07 | 134 |
| reproductive organ | 9.48e-07 | 24 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
