FFCP PHASE1:Hg19::chr6:152635032..152635056,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1894|description=CAGE_peak_at_chr6:152635032..152635056,-|id=chr6:152635032..152635056,-|ontology_enrichment_celltype=CL:0000077!8.00e-11!19;CL:0000039!1.07e-08!7;CL:0000586!1.07e-08!7;CL:1000306!7.04e-08!4;CL:0002547!7.04e-08!4|ontology_enrichment_celltype_v019=CL:0000077;1.54e-25;19!CL:0002563;4.02e-11;4|ontology_enrichment_celltype_v019_2=CL:0000077,1.46e-25,19;CL:0002563,4.45e-11,4;CL:0000213,6.52e-08,58;CL:0000215,6.52e-08,58;CL:0000076,3.17e-07,63|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.50e-08!14|ontology_enrichment_disease_v019=DOID:2394;1.97e-11;14|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-11,14|ontology_enrichment_uberon=UBERON:0000415!7.04e-08!4;UBERON:0007240!7.04e-08!4;UBERON:0005742!7.04e-08!4;UBERON:0005734!7.04e-08!4;UBERON:0004664!7.04e-08!4;UBERON:0004663!7.04e-08!4;UBERON:0002118!7.26e-07!5;UBERON:0004532!7.26e-07!5|ontology_enrichment_uberon_v019=UBERON:0007195;3.81e-11;1!UBERON:0001242;4.02e-11;4!UBERON:0001262;4.02e-11;4!UBERON:0004786;4.02e-11;4!UBERON:0004808;4.02e-11;4!UBERON:0001277;4.02e-11;4!UBERON:0002118;8.84e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.45e-11,4;UBERON:0001262,4.45e-11,4;UBERON:0004786,4.45e-11,4;UBERON:0004808,4.45e-11,4;UBERON:0001277,4.45e-11,4;UBERON:0007195,4.91e-11,1;UBERON:0002118,7.86e-09,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.25326102332916,1.58891016975863,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53598442648965,2.61460037580088,6.29829844446959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,1.0877350463246,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0,0,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.46112780877612,2.15418346583453,0.434589487688032,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0.720599767084807,3.49487848582361,0.787831823072237,0.576911008668165,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0,0.796483835818512,0,0.310525913752519,0,0,0,1.35231848097497,1.52322084867518,1.22061219961398,0,0.966695013382396,1.39210127963548,0.398095888698616,0,0,0,0,0,7.29101410674747,0,0,1.15761237161917,0,0.179088841081487,0.308801447160972,2.19284049578707,0.530067437837643,7.71656153083659,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0.523813388962845,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1894 | |||
|description=CAGE_peak_at_chr6:152635032..152635056,- | |||
|id=chr6:152635032..152635056,- | |||
|ontology_enrichment_celltype=CL:0000077!8.00e-11!19;CL:0000039!1.07e-08!7;CL:0000586!1.07e-08!7;CL:1000306!7.04e-08!4;CL:0002547!7.04e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.54e-25;19!CL:0002563;4.02e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.46e-25,19;CL:0002563,4.45e-11,4;CL:0000213,6.52e-08,58;CL:0000215,6.52e-08,58;CL:0000076,3.17e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.50e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.97e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000415!7.04e-08!4;UBERON:0007240!7.04e-08!4;UBERON:0005742!7.04e-08!4;UBERON:0005734!7.04e-08!4;UBERON:0004664!7.04e-08!4;UBERON:0004663!7.04e-08!4;UBERON:0002118!7.26e-07!5;UBERON:0004532!7.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.81e-11;1!UBERON:0001242;4.02e-11;4!UBERON:0001262;4.02e-11;4!UBERON:0004786;4.02e-11;4!UBERON:0004808;4.02e-11;4!UBERON:0001277;4.02e-11;4!UBERON:0002118;8.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.45e-11,4;UBERON:0001262,4.45e-11,4;UBERON:0004786,4.45e-11,4;UBERON:0004808,4.45e-11,4;UBERON:0001277,4.45e-11,4;UBERON:0007195,4.91e-11,1;UBERON:0002118,7.86e-09,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.25326102332916,1.58891016975863,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53598442648965,2.61460037580088,6.29829844446959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,1.0877350463246,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0,0,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.46112780877612,2.15418346583453,0.434589487688032,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0.720599767084807,3.49487848582361,0.787831823072237,0.576911008668165,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0,0.796483835818512,0,0.310525913752519,0,0,0,1.35231848097497,1.52322084867518,1.22061219961398,0,0.966695013382396,1.39210127963548,0.398095888698616,0,0,0,0,0,7.29101410674747,0,0,1.15761237161917,0,0.179088841081487,0.308801447160972,2.19284049578707,0.530067437837643,7.71656153083659,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0.523813388962845,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,1.0135880080915,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr6:152635032..152635056,- | |||
}} |
Revision as of 18:48, 13 September 2013
Short description: | p@chr6:152635032..152635056, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:152635032..152635056, - |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.46e-25 | 19 |
intestinal epithelial cell | 4.45e-11 | 4 |
lining cell | 6.52e-08 | 58 |
barrier cell | 6.52e-08 | 58 |
squamous epithelial cell | 3.17e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.45e-11 | 4 |
wall of intestine | 4.45e-11 | 4 |
gastrointestinal system mucosa | 4.45e-11 | 4 |
gastrointestinal system epithelium | 4.45e-11 | 4 |
intestinal epithelium | 4.45e-11 | 4 |
stroma of bone marrow | 4.91e-11 | 1 |
right ovary | 7.86e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-11 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.