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FFCP PHASE1:Mm9::chr1:127332271..127332287,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74117|HGNC=|UniProt=|association_with_transcript=-6bp_to_uc007ckf.1_5end|description=CAGE_peak_5_at_Actr3_5end|id=chr1:127332271..127332287,-|ontology_enrichment_celltype=CL:0000117!6.47e-08!23;CL:0000337!6.47e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.62e-08,23;CL:0000337,5.62e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.26e-12!86;UBERON:0000153!1.07e-11!94;UBERON:0000064!1.22e-10!99;UBERON:0002020!5.81e-08!34;UBERON:0002791!1.36e-07!29;UBERON:0003528!1.36e-07!29;UBERON:0001893!1.36e-07!29;UBERON:0000955!2.39e-07!50;UBERON:0006238!2.39e-07!50;UBERON:0001049!2.88e-07!52;UBERON:0005068!2.88e-07!52;UBERON:0006241!2.88e-07!52;UBERON:0007135!2.88e-07!52;UBERON:0002616!3.60e-07!49;UBERON:0000033!5.58e-07!63;UBERON:0003056!9.32e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.42e-08,73;UBERON:0002020,3.46e-08,34;UBERON:0000073,5.73e-08,54;UBERON:0003528,8.02e-08,29;UBERON:0002791,8.02e-08,29;UBERON:0001893,8.02e-08,29;UBERON:0001049,1.50e-07,52;UBERON:0005068,1.50e-07,52;UBERON:0006241,1.50e-07,52;UBERON:0007135,1.50e-07,52;UBERON:0003080,7.09e-07,40;UBERON:0000955,7.45e-07,47;UBERON:0006238,7.45e-07,47;UBERON:0003056,7.63e-07,49|phase1_expression=1.60148847104794,5.58360652222978,3.63999391511629,2.41971369045464,4.50806156951712,2.01455126294268,1.16806320297763,5.29405626110463,2.111830832275,2.80877431586392,11.4716038711088,10.8490136233658,4.28001824828014,4.28359971853087,2.33176833270964,1.41732687172878,0.699561878128147,0.788655413395594,1.23402990245165,1.27316895539409,3.14660173558958,0.695036658406197,0,1.75991665072747,1.14704640533585,2.8711598205751,2.58457197695445,1.72376986148711,2.47030445293286,4.03248207615889,1.33038306393183,0.635030673459631,1.84519436275371,0,1.73310971850765,2.1610503896604,1.63335485009895,4.60384793810598,6.2506827561904,2.09409497589519,3.52938892818609,8.87959130445979,3.39857247121808,0.125896817975577,0.608261587317087,1.46837401729345,0,1.96222640742402,0.219686182734472,0,0.699932108126813,1.43752564364972,0.503347818173209,4.35217285206807,2.68875039313971,1.02903774414379,0.286533439938757,1.03134418455488,5.26022798234954,2.11596391708813,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,7.77672092313582,7.56033254657468,6.30974884054146,1.99955689082663,1.10434270475807,6.98197555525238,8.62609239164127,9.19218786610021,2.20231761998777,4.59674417106676,4.45458946443106,4.74790635828698,7.31901148819277,6.25096044668112,3.07101298901519,1.68828783009504,4.12555268997387,4.12480019663135,3.84403538157578,3.72798891650601,2.19605960666234,1.51143120213571,0.579728977403356,0.860423876981386,2.719885334831,3.2382191498269,0,0.896053774194671,2.38755514223978,1.87473354835864,0,1.41335829804136,2.67602497575693,0,0,0,1.5154372870785,0.760079596425296,0.505524445014783,2.05530983494308,1.29468941823586,0.742210695324124,1.38788261412909,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,1.0053327306374,0.741584903203122,1.3013942122792,1.76922110389975,1.29413479957927,1.32504911076236,1.45462575940567,0,1.46390398505774,2.72280718857492,2.55457055208591,0.838705871541442,1.79970819298022,0.381210681219194,3.74476598512057,9.60751265919116,11.4345460422707,7.64827008846016,6.90431734791892,3.74018480207208,3.89379031362618,1.93494791315601,1.7416975885413,2.77995034277042,2.73574412652416,1.43132487258974,2.06911893990126,3.42118046630164,0.90422890701429,3.94611695077702,2.562274405697,3.46696380870997,1.55222022443409,1.5089759505299,1.51284864134255,2.11141348996739,2.6303487891309,2.78047249225598,2.43776516565517,1.64625709126355,2.38841120182192,2.1066395619397,0.257347907114715,1.13665399758237,1.24275463521301,0.938104239924385,1.62055855314913,0.946978942340841,1.18058539048442,1.23413690309903,0.697601834251224,0.536546802799238,0.817357396570186,0.987359099480883,0.985004784474571,0.972825714550269,1.16959989940266,0.878200461164203,1.20785776884335,5.04695876553905,7.71784592844633,2.64335026387038,2.64450566663544,1.49301775374664,1.16118335930219,2.06187938115349,1.81515172161008,2.44615848229357,2.47293313946327,1.89811624617805,1.81168850196412,2.01068167040216,2.18852119245266,1.36474860983384,1.79763881730844,2.80979464837102,2.19055400579804,2.84501851429623,1.94222471436539,3.38123207019241,1.62921062276251,1.93952487167626,2.17421041659988,1.51767689098217,1.03327103585722,0.784993639206874,1.1105744752962,1.48226313543574,1.66845105716094,3.14494392181125,2.47348323623339,3.04290182082754,2.894125917029,1.2731292589071,1.15078454980324,0.810676133875177,2.47105271869273,2.87536413054709,0.744281895337007,0.624075346229121,0.505157755894224,2.33216637578486,1.4473305640901,1.84753190166605,2.84237117655727,2.11854469374634,1.86719594352707,0.938760993154008,0.837531287209079,0.238043640886014,0.780534591431195,1.57635144106191,0.8858587585951,0.956728611944923,0.491589944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|EntrezGene=74117
|HGNC=
|UniProt=
|association_with_transcript=-6bp_to_uc007ckf.1_5end
|description=CAGE_peak_5_at_Actr3_5end
|id=chr1:127332271..127332287,-
|ontology_enrichment_celltype=CL:0000117!6.47e-08!23;CL:0000337!6.47e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.62e-08,23;CL:0000337,5.62e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.26e-12!86;UBERON:0000153!1.07e-11!94;UBERON:0000064!1.22e-10!99;UBERON:0002020!5.81e-08!34;UBERON:0002791!1.36e-07!29;UBERON:0003528!1.36e-07!29;UBERON:0001893!1.36e-07!29;UBERON:0000955!2.39e-07!50;UBERON:0006238!2.39e-07!50;UBERON:0001049!2.88e-07!52;UBERON:0005068!2.88e-07!52;UBERON:0006241!2.88e-07!52;UBERON:0007135!2.88e-07!52;UBERON:0002616!3.60e-07!49;UBERON:0000033!5.58e-07!63;UBERON:0003056!9.32e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.42e-08,73;UBERON:0002020,3.46e-08,34;UBERON:0000073,5.73e-08,54;UBERON:0003528,8.02e-08,29;UBERON:0002791,8.02e-08,29;UBERON:0001893,8.02e-08,29;UBERON:0001049,1.50e-07,52;UBERON:0005068,1.50e-07,52;UBERON:0006241,1.50e-07,52;UBERON:0007135,1.50e-07,52;UBERON:0003080,7.09e-07,40;UBERON:0000955,7.45e-07,47;UBERON:0006238,7.45e-07,47;UBERON:0003056,7.63e-07,49
|phase1_expression=1.60148847104794,5.58360652222978,3.63999391511629,2.41971369045464,4.50806156951712,2.01455126294268,1.16806320297763,5.29405626110463,2.111830832275,2.80877431586392,11.4716038711088,10.8490136233658,4.28001824828014,4.28359971853087,2.33176833270964,1.41732687172878,0.699561878128147,0.788655413395594,1.23402990245165,1.27316895539409,3.14660173558958,0.695036658406197,0,1.75991665072747,1.14704640533585,2.8711598205751,2.58457197695445,1.72376986148711,2.47030445293286,4.03248207615889,1.33038306393183,0.635030673459631,1.84519436275371,0,1.73310971850765,2.1610503896604,1.63335485009895,4.60384793810598,6.2506827561904,2.09409497589519,3.52938892818609,8.87959130445979,3.39857247121808,0.125896817975577,0.608261587317087,1.46837401729345,0,1.96222640742402,0.219686182734472,0,0.699932108126813,1.43752564364972,0.503347818173209,4.35217285206807,2.68875039313971,1.02903774414379,0.286533439938757,1.03134418455488,5.26022798234954,2.11596391708813,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,7.77672092313582,7.56033254657468,6.30974884054146,1.99955689082663,1.10434270475807,6.98197555525238,8.62609239164127,9.19218786610021,2.20231761998777,4.59674417106676,4.45458946443106,4.74790635828698,7.31901148819277,6.25096044668112,3.07101298901519,1.68828783009504,4.12555268997387,4.12480019663135,3.84403538157578,3.72798891650601,2.19605960666234,1.51143120213571,0.579728977403356,0.860423876981386,2.719885334831,3.2382191498269,0,0.896053774194671,2.38755514223978,1.87473354835864,0,1.41335829804136,2.67602497575693,0,0,0,1.5154372870785,0.760079596425296,0.505524445014783,2.05530983494308,1.29468941823586,0.742210695324124,1.38788261412909,0.608930956624282,0.922461989024234,0.904335843315735,1.05829836422134,1.0053327306374,0.741584903203122,1.3013942122792,1.76922110389975,1.29413479957927,1.32504911076236,1.45462575940567,0,1.46390398505774,2.72280718857492,2.55457055208591,0.838705871541442,1.79970819298022,0.381210681219194,3.74476598512057,9.60751265919116,11.4345460422707,7.64827008846016,6.90431734791892,3.74018480207208,3.89379031362618,1.93494791315601,1.7416975885413,2.77995034277042,2.73574412652416,1.43132487258974,2.06911893990126,3.42118046630164,0.90422890701429,3.94611695077702,2.562274405697,3.46696380870997,1.55222022443409,1.5089759505299,1.51284864134255,2.11141348996739,2.6303487891309,2.78047249225598,2.43776516565517,1.64625709126355,2.38841120182192,2.1066395619397,0.257347907114715,1.13665399758237,1.24275463521301,0.938104239924385,1.62055855314913,0.946978942340841,1.18058539048442,1.23413690309903,0.697601834251224,0.536546802799238,0.817357396570186,0.987359099480883,0.985004784474571,0.972825714550269,1.16959989940266,0.878200461164203,1.20785776884335,5.04695876553905,7.71784592844633,2.64335026387038,2.64450566663544,1.49301775374664,1.16118335930219,2.06187938115349,1.81515172161008,2.44615848229357,2.47293313946327,1.89811624617805,1.81168850196412,2.01068167040216,2.18852119245266,1.36474860983384,1.79763881730844,2.80979464837102,2.19055400579804,2.84501851429623,1.94222471436539,3.38123207019241,1.62921062276251,1.93952487167626,2.17421041659988,1.51767689098217,1.03327103585722,0.784993639206874,1.1105744752962,1.48226313543574,1.66845105716094,3.14494392181125,2.47348323623339,3.04290182082754,2.894125917029,1.2731292589071,1.15078454980324,0.810676133875177,2.47105271869273,2.87536413054709,0.744281895337007,0.624075346229121,0.505157755894224,2.33216637578486,1.4473305640901,1.84753190166605,2.84237117655727,2.11854469374634,1.86719594352707,0.938760993154008,0.837531287209079,0.238043640886014,0.780534591431195,1.57635144106191,0.8858587585951,0.956728611944923,0.491589944147214,1.89953480052485,1.59113964439663,0,0,2.45882136509518,2.48343071674259,3.69266356971921,3.7507739709505,3.44263385291018,1.26235463602186,1.26203287766503,1.56175497718655,0.646270193198397,2.15071918157297,2.00518806674155,1.13230612315533,1.21443210502468,0.876767573733936,0.790575555893047,2.89189184779626,1.13552068166615,1.95872164033981,1.95464351224291,0.494910368917606,1.32745138339963,0.728341908464944,2.11626489875326,3.01768127609437,1.47650946440386,1.84461088766356,1.55056975900933,3.27180356529755,1.06949213515416,3.16036757935816,2.10837217149998,0,2.38307724027652,2.16073312837572,1.4229455216103,1.28602221018955,1.59606210278046,1.24858172321449,1.15184314421485,2.43571959291679,1.40803024838226,0.63549621259146,0.220528398054962,4.122156323537,3.22928853391811,5.97097956788743,5.61050016814741,8.042904087508,3.78925087618806,4.45020724825223,2.22132145037209,1.44470807574256,2.03713980106683,1.50694765603753,3.2806614653046,2.0590035588587,1.01987057996313,1.25956307091292,1.10559979043539,0.954670618015114,3.79603192297362,0.813277868507395,1.08005340821801,0.418176592028937,1.09181281873089,1.48350781023303,1.40510874733071,2.09404753587224,1.94422459937689,0.621339313086926,3.38215763210514,3.43888055901151,3.14371131868485,2.72231663681667,2.32487682259916,3.37912250981556,2.8165737274981,1.5624526181274,3.98465508817701,2.89900944991207,3.16833006883652,7.2682557744481,1.82452693761148,1.84879722896689,4.93699127315621,3.75956060901711,5.56307793387542,8.53387691591779,10.485956429395,6.96668504642219,9.06860999194498,10.4859232542314,8.96612502805722,11.4492091551992,10.0514135876149,2.26730383615211,3.10780334723691,4.48569283047379,2.68615386182526,0.19318959403219,0.93841237725591,1.09890974560359,2.14368379079066,0,2.25900737046827,3.22227665555024,3.43737308063638,3.26521046453006,4.11049511862385,0.755393897389701,2.02506750069542,1.80128481289688,4.53142408984205,3.62432218226274,3.42498247027783,3.59122386060928,1.70733605754134,1.45864030240976,2.72497111416377,3.8607136774503,3.11145418922261,2.67845574410562,1.60459604795908,3.03236654116557,1.2673964994512,2.82939512079114,1.96647165686753,3.00918216302886,3.50356360629241,0.476293691283074,2.31768651889711,4.43691207066522,0,1.61918812147837,1.71434626192708,1.77475806159337,3.57654284920981,1.59881058295561,2.07040636913727,1.77690676572521,2.37806364734604,0.789209134313529,2.98769050460896,1.68342681497322,2.72860541685601,3.94017929502254,1.22769312950907,2.63392630016142,1.73615949883027,2.74791635731741,2.10538447600868,1.71896843238639,0.765153328275374,1.54413993383661,1.62307484934295
|short_description=p5@Actr3
}}

Revision as of 18:40, 13 September 2013

Short description:p5@Actr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Actr3_5end
Coexpression cluster:NA
Association with transcript: -6bp_to_uc007ckf.1_5end
EntrezGene:Actr3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Actr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H35.97
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F88.53
thymus, neonate N03.CNhs11137.2104-43C710.49
thymus, neonate N06.CNhs11197.681-26C46.97
thymus, neonate N07.CNhs11211.713-19D39.07
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A28.97
thymus, neonate N25.CNhs11125.1362-25G711.45
thymus, neonate N30.CNhs11132.1393-42G210.05
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.62e-0823
neuroblast (sensu Vertebrata)5.62e-0823

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.42e-0873
gray matter3.46e-0834
regional part of nervous system5.73e-0854
brain grey matter8.02e-0829
regional part of telencephalon8.02e-0829
telencephalon8.02e-0829
neural tube1.50e-0752
neural rod1.50e-0752
future spinal cord1.50e-0752
neural keel1.50e-0752
anterior neural tube7.09e-0740
brain7.45e-0747
future brain7.45e-0747
pre-chordal neural plate7.63e-0749







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