FFCP PHASE1:Hg19::chr6:149068544..149068559,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10090|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17223|TSSclassifier=S|UniProt=Q9Y2C2|association_with_transcript=80bp_to_ENST00000367463_5end|description=CAGE_peak_5_at_UST_5end|id=chr6:149068544..149068559,+|ontology_enrichment_celltype=CL:0000055!6.69e-07!180|ontology_enrichment_celltype_v019=CL:0002600;2.87e-14;2!CL:0000511;5.58e-08;1!CL:0002625;5.58e-08;1!CL:0000216;5.58e-08;1!CL:0002591;5.58e-08;1!CL:0002379;5.58e-08;1!CL:1000306;8.84e-08;4!CL:0002547;8.84e-08;4|ontology_enrichment_celltype_v019_2=CL:0002600,2.89e-14,2;CL:0000511,3.58e-08,1;CL:0002625,3.58e-08,1;CL:0000216,3.58e-08,1;CL:0002379,6.19e-08,1;CL:0002591,7.59e-08,1;CL:1000306,7.87e-08,4;CL:0002547,7.87e-08,4;CL:0000192,9.44e-07,43;CL:0000514,9.44e-07,43|ontology_enrichment_development_v019=UBERON:0006215;1.91e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;5.58e-08;1!DOID:3565;5.58e-08;1|ontology_enrichment_disease_v019_2=DOID:3620,6.19e-08,1;DOID:3565,6.19e-08,1|ontology_enrichment_uberon=UBERON:0007023!9.20e-09!115;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0000477!2.02e-07!286;UBERON:0002616!2.20e-07!59;UBERON:0003075!6.90e-07!86;UBERON:0007284!6.90e-07!86|ontology_enrichment_uberon_v019=UBERON:0001136;5.58e-08;1!UBERON:0001343;5.58e-08;1!UBERON:0004910;5.58e-08;1!UBERON:0004813;5.58e-08;1!UBERON:0004797;8.84e-08;4!UBERON:0000415;8.84e-08;4!UBERON:0007240;8.84e-08;4!UBERON:0005742;8.84e-08;4!UBERON:0005734;8.84e-08;4!UBERON:0004664;8.84e-08;4!UBERON:0004663;8.84e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-08,1;UBERON:0001343,3.58e-08,1;UBERON:0004910,3.58e-08,1;UBERON:0005154,3.58e-08,1;UBERON:0005295,3.58e-08,1;UBERON:0004813,3.58e-08,1;UBERON:0005297,3.58e-08,1;UBERON:0005294,3.58e-08,1;UBERON:0010141,3.58e-08,1;UBERON:0005891,3.58e-08,1;UBERON:0000415,7.87e-08,4;UBERON:0007240,7.87e-08,4;UBERON:0005742,7.87e-08,4;UBERON:0005734,7.87e-08,4;UBERON:0004664,7.87e-08,4;UBERON:0004663,7.87e-08,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.472264687882075,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,1.14681968437569,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.58891016975863,2.0078563452417,0.709336764396714,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.847727604638247,0.600182192168805,0.206105058476878,1.03056216018252,0.18611685633159,1.35021065793013,0.292311015483596,0.252433774244115,0.276149695926898,0.323292113637624,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0.25248486685276,0.317489471460845,0.381988425558278,0,0,0.411309970813294,0,0,0,0,0,0.387815147273333,0,0,0,2.08014873822732,0.514414748524284,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.03985430765404,0.356857977594324,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.413536052245775,0,0.320182673410333,0,0,0,0.248107807818777,0.460385919864187,1.12264037773229,0.384417447767103,1.02341449813341,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0,0,0.184161977871793,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0,1.88887408098384,0,0.924100740528266,0.5323060303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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10090 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17223 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2C2 | |||
|association_with_transcript=80bp_to_ENST00000367463_5end | |||
|description=CAGE_peak_5_at_UST_5end | |||
|id=chr6:149068544..149068559,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.69e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.87e-14;2!CL:0000511;5.58e-08;1!CL:0002625;5.58e-08;1!CL:0000216;5.58e-08;1!CL:0002591;5.58e-08;1!CL:0002379;5.58e-08;1!CL:1000306;8.84e-08;4!CL:0002547;8.84e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.89e-14,2;CL:0000511,3.58e-08,1;CL:0002625,3.58e-08,1;CL:0000216,3.58e-08,1;CL:0002379,6.19e-08,1;CL:0002591,7.59e-08,1;CL:1000306,7.87e-08,4;CL:0002547,7.87e-08,4;CL:0000192,9.44e-07,43;CL:0000514,9.44e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.91e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;5.58e-08;1!DOID:3565;5.58e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.19e-08,1;DOID:3565,6.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.20e-09!115;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0000477!2.02e-07!286;UBERON:0002616!2.20e-07!59;UBERON:0003075!6.90e-07!86;UBERON:0007284!6.90e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.58e-08;1!UBERON:0001343;5.58e-08;1!UBERON:0004910;5.58e-08;1!UBERON:0004813;5.58e-08;1!UBERON:0004797;8.84e-08;4!UBERON:0000415;8.84e-08;4!UBERON:0007240;8.84e-08;4!UBERON:0005742;8.84e-08;4!UBERON:0005734;8.84e-08;4!UBERON:0004664;8.84e-08;4!UBERON:0004663;8.84e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-08,1;UBERON:0001343,3.58e-08,1;UBERON:0004910,3.58e-08,1;UBERON:0005154,3.58e-08,1;UBERON:0005295,3.58e-08,1;UBERON:0004813,3.58e-08,1;UBERON:0005297,3.58e-08,1;UBERON:0005294,3.58e-08,1;UBERON:0010141,3.58e-08,1;UBERON:0005891,3.58e-08,1;UBERON:0000415,7.87e-08,4;UBERON:0007240,7.87e-08,4;UBERON:0005742,7.87e-08,4;UBERON:0005734,7.87e-08,4;UBERON:0004664,7.87e-08,4;UBERON:0004663,7.87e-08,4 | |||
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| |||
|short_description=p5@UST | |||
}} |
Revision as of 18:39, 13 September 2013
Short description: | p5@UST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UST_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000367463_5end |
EntrezGene: | UST |
HGNC: | 17223 |
UniProt: | Q9Y2C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.89e-14 | 2 |
androgen binding protein secreting cell | 3.58e-08 | 1 |
seminiferous tubule epithelial cell | 3.58e-08 | 1 |
Sertoli cell | 3.58e-08 | 1 |
meningothelial cell | 6.19e-08 | 1 |
smooth muscle cell of the pulmonary artery | 7.59e-08 | 1 |
fibroblast of tunica adventitia of artery | 7.87e-08 | 4 |
fibroblast of the aortic adventitia | 7.87e-08 | 4 |
smooth muscle cell | 9.44e-07 | 43 |
smooth muscle myoblast | 9.44e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.58e-08 | 1 |
seminiferous tubule of testis | 3.58e-08 | 1 |
epithelium of male gonad | 3.58e-08 | 1 |
epithelial cord | 3.58e-08 | 1 |
sex cord | 3.58e-08 | 1 |
seminiferous tubule epithelium | 3.58e-08 | 1 |
testis sex cord | 3.58e-08 | 1 |
genital ridge | 3.58e-08 | 1 |
primitive sex cord of indifferent gonad | 3.58e-08 | 1 |
coelomic epithelium | 3.58e-08 | 1 |
artery wall | 7.87e-08 | 4 |
tunica adventitia of artery | 7.87e-08 | 4 |
adventitia | 7.87e-08 | 4 |
tunica adventitia of blood vessel | 7.87e-08 | 4 |
aorta tunica adventitia | 7.87e-08 | 4 |
aorta wall | 7.87e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.19e-08 | 1 |
meningioma | 6.19e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.