FFCP PHASE1:Hg19::chr6:144980916..144980928,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7402|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12635|TSSclassifier=S|UniProt=Q5T098|association_with_transcript=-51bp_to_ENST00000367525_5end|coexpression_cluster_id=C92|description=CAGE_peak_23_at_UTRN_5end|id=chr6:144980916..144980928,+|ontology_enrichment_celltype=CL:0002057!2.04e-43!42;CL:0000860!6.24e-41!45;CL:0002194!1.85e-39!63;CL:0000576!1.85e-39!63;CL:0000040!1.85e-39!63;CL:0000559!1.85e-39!63;CL:0002009!1.29e-37!65;CL:0002087!1.32e-36!119;CL:0000766!5.86e-34!76;CL:0000839!1.73e-33!70;CL:0000557!9.82e-33!71;CL:0000738!2.01e-31!140;CL:0002031!4.88e-30!124;CL:0000037!2.60e-25!172;CL:0000566!2.60e-25!172;CL:0000988!1.43e-24!182;CL:0002032!1.91e-24!165;CL:0000837!1.91e-24!165;CL:0000763!9.19e-23!112;CL:0000049!9.19e-23!112;CL:0002393!5.21e-12!9;CL:0002397!5.21e-12!9;CL:0002320!8.13e-07!365;CL:0000134!8.45e-07!358|ontology_enrichment_celltype_v019=CL:0000860;7.38e-52;33!CL:0002057;7.38e-52;33!CL:0000576;5.51e-47;48!CL:0000473;4.80e-40;39!CL:0000234;4.80e-40;39!CL:0000766;8.71e-36;69!CL:0002393;1.13e-23;6!CL:0002397;1.13e-23;6!CL:0000763;1.07e-14;100!CL:0002087;1.10e-14;104!CL:0000875;1.52e-13;3!CL:0002396;1.52e-13;3!CL:0000738;7.38e-11;136!CL:0000988;3.82e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,5.83e-88,42;CL:0002057,5.83e-88,42;CL:0000473,2.63e-81,48;CL:0000234,2.63e-81,48;CL:0002194,1.36e-67,59;CL:0000576,1.36e-67,59;CL:0000040,1.36e-67,59;CL:0000559,1.36e-67,59;CL:0002009,3.83e-65,61;CL:0000766,4.19e-61,72;CL:0000839,1.17e-59,66;CL:0000557,1.17e-58,67;CL:0002087,1.35e-44,115;CL:0000738,1.10e-40,136;CL:0000763,1.40e-40,108;CL:0000049,1.40e-40,108;CL:0002031,1.30e-37,120;CL:0002393,1.23e-35,9;CL:0002397,1.23e-35,9;CL:0000037,4.49e-33,168;CL:0002032,4.27e-31,161;CL:0000837,4.27e-31,161;CL:0000988,6.50e-31,177;CL:0000875,1.53e-13,3;CL:0002396,1.53e-13,3;CL:0000134,1.56e-11,354;CL:0002320,4.02e-11,361;CL:0000219,1.13e-09,386;CL:0000048,6.55e-08,427;CL:0000723,1.15e-07,433;CL:0000034,2.36e-07,441|ontology_enrichment_development_v019=CL:0002057;3.66e-62;42!CL:0000049;9.87e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.78e-39!102;UBERON:0003061!2.78e-39!102;UBERON:0002193!3.73e-37!112;UBERON:0002371!1.13e-30!80;UBERON:0001474!2.80e-29!86;UBERON:0004765!5.28e-25!101;UBERON:0001434!5.28e-25!101;UBERON:0002405!3.10e-24!115;UBERON:0002204!4.37e-11!167;UBERON:0003081!5.48e-11!216;UBERON:0000178!1.56e-07!15;UBERON:0000179!1.56e-07!15;UBERON:0000463!1.56e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-08;15!UBERON:0000179;1.30e-08;15!UBERON:0000463;1.30e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.93e-54,98;UBERON:0003061,2.93e-54,98;UBERON:0002371,7.95e-51,76;UBERON:0002193,1.97e-48,108;UBERON:0001474,1.51e-46,82;UBERON:0004765,1.01e-41,90;UBERON:0002405,3.99e-40,93;UBERON:0001434,9.11e-37,100;UBERON:0003081,1.48e-21,203;UBERON:0002204,8.22e-19,167;UBERON:0000926,1.14e-10,315;UBERON:0004120,1.14e-10,315;UBERON:0006603,1.14e-10,315;UBERON:0002384,1.46e-10,371;UBERON:0000178,1.15e-08,15;UBERON:0000179,1.15e-08,15;UBERON:0000463,1.15e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,1.18009283054671,0.383829398097213,1.85779347979291,0,0,0,0.0774672005803016,0,0,1.66198622559563,2.4065333696417,1.51907609501096,1.79132379391939,0.971680998056939,0.515151135268373,2.90796477559129,1.13362783106643,4.60909716256851,1.16214518452842,1.6446715520873,0.619412741790207,0.575384784644301,2.0492856522328,1.6553756092201,1.03423704220986,1.29096936716765,2.70852973188684,1.50593871634084,0.818718450173537,3.82029923556644,1.22433556948361,0.641858054152187,1.27867425159808,1.64925650093358,3.19141852194611,5.54092175692502,0.580418477257168,1.13477044938228,1.86846674698672,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0,1.89877432464531,8.45021145247767,11.4806321981124,7.12839394728478,2.3589012540764,3.15371474967163,1.92870704036496,15.3906881620274,13.9241674039363,15.5264530699939,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,0.560508562981536,0.263384084775077,0,1.17903228824749,0.205601498999509,0,0,0,0,0,0,0,0.541607727530031,0.128091319725675,0,0.657751618414705,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,0,0,1.24930726552346,0.236777252044017,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12635 | |||
|TSSclassifier=S | |||
|UniProt=Q5T098 | |||
|association_with_transcript=-51bp_to_ENST00000367525_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_23_at_UTRN_5end | |||
|id=chr6:144980916..144980928,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.04e-43!42;CL:0000860!6.24e-41!45;CL:0002194!1.85e-39!63;CL:0000576!1.85e-39!63;CL:0000040!1.85e-39!63;CL:0000559!1.85e-39!63;CL:0002009!1.29e-37!65;CL:0002087!1.32e-36!119;CL:0000766!5.86e-34!76;CL:0000839!1.73e-33!70;CL:0000557!9.82e-33!71;CL:0000738!2.01e-31!140;CL:0002031!4.88e-30!124;CL:0000037!2.60e-25!172;CL:0000566!2.60e-25!172;CL:0000988!1.43e-24!182;CL:0002032!1.91e-24!165;CL:0000837!1.91e-24!165;CL:0000763!9.19e-23!112;CL:0000049!9.19e-23!112;CL:0002393!5.21e-12!9;CL:0002397!5.21e-12!9;CL:0002320!8.13e-07!365;CL:0000134!8.45e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.38e-52;33!CL:0002057;7.38e-52;33!CL:0000576;5.51e-47;48!CL:0000473;4.80e-40;39!CL:0000234;4.80e-40;39!CL:0000766;8.71e-36;69!CL:0002393;1.13e-23;6!CL:0002397;1.13e-23;6!CL:0000763;1.07e-14;100!CL:0002087;1.10e-14;104!CL:0000875;1.52e-13;3!CL:0002396;1.52e-13;3!CL:0000738;7.38e-11;136!CL:0000988;3.82e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.83e-88,42;CL:0002057,5.83e-88,42;CL:0000473,2.63e-81,48;CL:0000234,2.63e-81,48;CL:0002194,1.36e-67,59;CL:0000576,1.36e-67,59;CL:0000040,1.36e-67,59;CL:0000559,1.36e-67,59;CL:0002009,3.83e-65,61;CL:0000766,4.19e-61,72;CL:0000839,1.17e-59,66;CL:0000557,1.17e-58,67;CL:0002087,1.35e-44,115;CL:0000738,1.10e-40,136;CL:0000763,1.40e-40,108;CL:0000049,1.40e-40,108;CL:0002031,1.30e-37,120;CL:0002393,1.23e-35,9;CL:0002397,1.23e-35,9;CL:0000037,4.49e-33,168;CL:0002032,4.27e-31,161;CL:0000837,4.27e-31,161;CL:0000988,6.50e-31,177;CL:0000875,1.53e-13,3;CL:0002396,1.53e-13,3;CL:0000134,1.56e-11,354;CL:0002320,4.02e-11,361;CL:0000219,1.13e-09,386;CL:0000048,6.55e-08,427;CL:0000723,1.15e-07,433;CL:0000034,2.36e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-62;42!CL:0000049;9.87e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-39!102;UBERON:0003061!2.78e-39!102;UBERON:0002193!3.73e-37!112;UBERON:0002371!1.13e-30!80;UBERON:0001474!2.80e-29!86;UBERON:0004765!5.28e-25!101;UBERON:0001434!5.28e-25!101;UBERON:0002405!3.10e-24!115;UBERON:0002204!4.37e-11!167;UBERON:0003081!5.48e-11!216;UBERON:0000178!1.56e-07!15;UBERON:0000179!1.56e-07!15;UBERON:0000463!1.56e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-08;15!UBERON:0000179;1.30e-08;15!UBERON:0000463;1.30e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.93e-54,98;UBERON:0003061,2.93e-54,98;UBERON:0002371,7.95e-51,76;UBERON:0002193,1.97e-48,108;UBERON:0001474,1.51e-46,82;UBERON:0004765,1.01e-41,90;UBERON:0002405,3.99e-40,93;UBERON:0001434,9.11e-37,100;UBERON:0003081,1.48e-21,203;UBERON:0002204,8.22e-19,167;UBERON:0000926,1.14e-10,315;UBERON:0004120,1.14e-10,315;UBERON:0006603,1.14e-10,315;UBERON:0002384,1.46e-10,371;UBERON:0000178,1.15e-08,15;UBERON:0000179,1.15e-08,15;UBERON:0000463,1.15e-08,15 | |||
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| |||
|short_description=p23@UTRN | |||
}} |
Revision as of 18:33, 13 September 2013
Short description: | p23@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_UTRN_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -51bp_to_ENST00000367525_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | Q5T098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.93e-54 | 98 |
blood island | 2.93e-54 | 98 |
bone marrow | 7.95e-51 | 76 |
hemolymphoid system | 1.97e-48 | 108 |
bone element | 1.51e-46 | 82 |
skeletal element | 1.01e-41 | 90 |
immune system | 3.99e-40 | 93 |
skeletal system | 9.11e-37 | 100 |
lateral plate mesoderm | 1.48e-21 | 203 |
musculoskeletal system | 8.22e-19 | 167 |
mesoderm | 1.14e-10 | 315 |
mesoderm-derived structure | 1.14e-10 | 315 |
presumptive mesoderm | 1.14e-10 | 315 |
connective tissue | 1.46e-10 | 371 |
blood | 1.15e-08 | 15 |
haemolymphatic fluid | 1.15e-08 | 15 |
organism substance | 1.15e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.