FFCP PHASE1:Hg19::chr6:144471637..144471640,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8676|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11429|TSSclassifier=S|UniProt=O75558|association_with_transcript=-13bp_to_NM_003764,uc003qks.3_5end|coexpression_cluster_id=C26|description=CAGE_peak_2_at_STX11_5end|id=chr6:144471637..144471640,+|ontology_enrichment_celltype=CL:0000738!1.86e-48!140;CL:0000037!3.86e-43!172;CL:0000566!3.86e-43!172;CL:0000988!1.11e-42!182;CL:0002032!3.05e-40!165;CL:0000837!3.05e-40!165;CL:0002031!4.24e-40!124;CL:0000766!5.56e-38!76;CL:0002087!3.49e-36!119;CL:0002057!2.66e-33!42;CL:0000557!3.88e-32!71;CL:0000839!4.11e-32!70;CL:0000763!8.23e-32!112;CL:0000049!8.23e-32!112;CL:0002009!9.31e-30!65;CL:0000860!1.92e-29!45;CL:0002194!2.31e-28!63;CL:0000576!2.31e-28!63;CL:0000040!2.31e-28!63;CL:0000559!2.31e-28!63;CL:0000134!1.46e-11!358;CL:0002320!2.19e-10!365;CL:0000838!1.84e-08!52;CL:0002393!3.61e-08!9;CL:0002397!3.61e-08!9;CL:0000542!4.63e-08!53;CL:0000051!4.63e-08!53;CL:0000094!8.77e-08!8;CL:0000219!1.31e-07!390;CL:0000084!5.61e-07!25;CL:0000827!5.61e-07!25|ontology_enrichment_celltype_v019=CL:0000860;2.60e-48;33!CL:0002057;2.60e-48;33!CL:0000473;9.63e-42;39!CL:0000234;9.63e-42;39!CL:0000576;1.39e-37;48!CL:0000766;3.17e-34;69!CL:0002087;1.13e-15;104!CL:0000738;1.51e-15;136!CL:0000094;2.10e-14;8!CL:0000763;2.53e-14;100!CL:0000081;1.84e-12;11!CL:0002393;4.57e-11;6!CL:0002397;4.57e-11;6!CL:0000988;3.87e-10;177!CL:0000097;4.05e-08;5!CL:0000219;3.28e-07;193|ontology_enrichment_celltype_v019_2=CL:0000766,5.65e-78,72;CL:0000738,9.32e-71,136;CL:0000473,5.81e-68,48;CL:0000234,5.81e-68,48;CL:0000860,1.82e-67,42;CL:0002057,1.82e-67,42;CL:0000557,2.59e-66,67;CL:0000839,4.02e-62,66;CL:0002009,1.11e-60,61;CL:0002194,9.48e-58,59;CL:0000576,9.48e-58,59;CL:0000040,9.48e-58,59;CL:0000559,9.48e-58,59;CL:0000988,2.21e-54,177;CL:0000037,8.36e-54,168;CL:0002031,1.30e-53,120;CL:0000763,2.59e-52,108;CL:0000049,2.59e-52,108;CL:0002087,1.97e-49,115;CL:0002032,2.05e-49,161;CL:0000837,2.05e-49,161;CL:0000134,2.38e-16,354;CL:0002320,1.49e-15,361;CL:0002393,3.29e-15,9;CL:0002397,3.29e-15,9;CL:0000094,2.04e-14,8;CL:0000219,8.91e-13,386;CL:0000081,1.78e-12,11;CL:0000034,8.54e-10,441;CL:0000048,1.79e-09,427;CL:0000723,4.97e-09,433;CL:0000097,4.41e-08,5;CL:0002028,4.41e-08,5|ontology_enrichment_development_v019=CL:0002057;3.79e-48;42!CL:0000049;4.08e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.89e-40!112;UBERON:0002390!1.08e-39!102;UBERON:0003061!1.08e-39!102;UBERON:0002371!3.70e-27!80;UBERON:0001474!1.08e-23!86;UBERON:0002405!1.31e-23!115;UBERON:0004765!4.73e-21!101;UBERON:0001434!4.73e-21!101;UBERON:0003081!7.95e-19!216;UBERON:0000178!7.85e-11!15;UBERON:0000179!7.85e-11!15;UBERON:0000463!7.85e-11!15;UBERON:0002384!1.00e-09!375;UBERON:0002204!3.67e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-20;15!UBERON:0000179;1.85e-20;15!UBERON:0000463;1.85e-20;15!UBERON:0002390;2.05e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.66e-78,98;UBERON:0003061,2.66e-78,98;UBERON:0002193,6.79e-69,108;UBERON:0002371,2.65e-56,76;UBERON:0001474,7.53e-51,82;UBERON:0002405,8.34e-50,93;UBERON:0004765,1.03e-44,90;UBERON:0001434,1.95e-38,100;UBERON:0003081,3.68e-34,203;UBERON:0000178,1.04e-20,15;UBERON:0000179,1.04e-20,15;UBERON:0000463,1.04e-20,15;UBERON:0002204,6.78e-17,167;UBERON:0000926,1.57e-15,315;UBERON:0004120,1.57e-15,315;UBERON:0006603,1.57e-15,315;UBERON:0002384,4.37e-15,371|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.57470412614962,0.865818594450472,14.1611139665605,8.06041736004147,22.7579701274632,0,0,0,0,0,0.587200878669695,22.1598163412751,17.6479113773725,22.3521196837327,0.895661896959697,0.647787332037959,1.28787783817093,4.79814187972564,4.1566353805769,5.33684934613196,11.8538808821899,9.45686142450199,9.29119112685311,21.2892370318391,17.931249457037,24.3576696785243,15.8583013138845,16.7826017731795,27.0852973188684,8.65914761895982,9.82462140208245,11.4608977066993,17.4467818651414,12.8371610830437,19.1801137739712,28.0373605158709,19.1485111316767,23.4423612792982,19.1538097494865,14.7520158419696,18.6846674698673,15.0749199154046,15.1230046341858,18.4610517999349,24.8213796079681,20.6235476153036,24.684066220389,14.9991253281479,12.3310493979725,10.2732736299104,10.7835485900635,10.6625593917469,11.0900654820985,6.84030584978997,9.54800050555633,7.85455861187926,0,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,6.72610275577843,1.05353633910031,0.983548850569165,0.786021525498329,2.2616164889946,0.334372990781356,0.32592226663359,0,0,0.891283655081389,2.06224135232386,1.55073726208535,0.270803863765016,1.15282187753108,1.69077151827842,0.493313713811028,0.829050053357545,0.579606171470105,0.14828656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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11429 | |||
|TSSclassifier=S | |||
|UniProt=O75558 | |||
|association_with_transcript=-13bp_to_NM_003764,uc003qks.3_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_STX11_5end | |||
|id=chr6:144471637..144471640,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.86e-48!140;CL:0000037!3.86e-43!172;CL:0000566!3.86e-43!172;CL:0000988!1.11e-42!182;CL:0002032!3.05e-40!165;CL:0000837!3.05e-40!165;CL:0002031!4.24e-40!124;CL:0000766!5.56e-38!76;CL:0002087!3.49e-36!119;CL:0002057!2.66e-33!42;CL:0000557!3.88e-32!71;CL:0000839!4.11e-32!70;CL:0000763!8.23e-32!112;CL:0000049!8.23e-32!112;CL:0002009!9.31e-30!65;CL:0000860!1.92e-29!45;CL:0002194!2.31e-28!63;CL:0000576!2.31e-28!63;CL:0000040!2.31e-28!63;CL:0000559!2.31e-28!63;CL:0000134!1.46e-11!358;CL:0002320!2.19e-10!365;CL:0000838!1.84e-08!52;CL:0002393!3.61e-08!9;CL:0002397!3.61e-08!9;CL:0000542!4.63e-08!53;CL:0000051!4.63e-08!53;CL:0000094!8.77e-08!8;CL:0000219!1.31e-07!390;CL:0000084!5.61e-07!25;CL:0000827!5.61e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.60e-48;33!CL:0002057;2.60e-48;33!CL:0000473;9.63e-42;39!CL:0000234;9.63e-42;39!CL:0000576;1.39e-37;48!CL:0000766;3.17e-34;69!CL:0002087;1.13e-15;104!CL:0000738;1.51e-15;136!CL:0000094;2.10e-14;8!CL:0000763;2.53e-14;100!CL:0000081;1.84e-12;11!CL:0002393;4.57e-11;6!CL:0002397;4.57e-11;6!CL:0000988;3.87e-10;177!CL:0000097;4.05e-08;5!CL:0000219;3.28e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.65e-78,72;CL:0000738,9.32e-71,136;CL:0000473,5.81e-68,48;CL:0000234,5.81e-68,48;CL:0000860,1.82e-67,42;CL:0002057,1.82e-67,42;CL:0000557,2.59e-66,67;CL:0000839,4.02e-62,66;CL:0002009,1.11e-60,61;CL:0002194,9.48e-58,59;CL:0000576,9.48e-58,59;CL:0000040,9.48e-58,59;CL:0000559,9.48e-58,59;CL:0000988,2.21e-54,177;CL:0000037,8.36e-54,168;CL:0002031,1.30e-53,120;CL:0000763,2.59e-52,108;CL:0000049,2.59e-52,108;CL:0002087,1.97e-49,115;CL:0002032,2.05e-49,161;CL:0000837,2.05e-49,161;CL:0000134,2.38e-16,354;CL:0002320,1.49e-15,361;CL:0002393,3.29e-15,9;CL:0002397,3.29e-15,9;CL:0000094,2.04e-14,8;CL:0000219,8.91e-13,386;CL:0000081,1.78e-12,11;CL:0000034,8.54e-10,441;CL:0000048,1.79e-09,427;CL:0000723,4.97e-09,433;CL:0000097,4.41e-08,5;CL:0002028,4.41e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-48;42!CL:0000049;4.08e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.89e-40!112;UBERON:0002390!1.08e-39!102;UBERON:0003061!1.08e-39!102;UBERON:0002371!3.70e-27!80;UBERON:0001474!1.08e-23!86;UBERON:0002405!1.31e-23!115;UBERON:0004765!4.73e-21!101;UBERON:0001434!4.73e-21!101;UBERON:0003081!7.95e-19!216;UBERON:0000178!7.85e-11!15;UBERON:0000179!7.85e-11!15;UBERON:0000463!7.85e-11!15;UBERON:0002384!1.00e-09!375;UBERON:0002204!3.67e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-20;15!UBERON:0000179;1.85e-20;15!UBERON:0000463;1.85e-20;15!UBERON:0002390;2.05e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.66e-78,98;UBERON:0003061,2.66e-78,98;UBERON:0002193,6.79e-69,108;UBERON:0002371,2.65e-56,76;UBERON:0001474,7.53e-51,82;UBERON:0002405,8.34e-50,93;UBERON:0004765,1.03e-44,90;UBERON:0001434,1.95e-38,100;UBERON:0003081,3.68e-34,203;UBERON:0000178,1.04e-20,15;UBERON:0000179,1.04e-20,15;UBERON:0000463,1.04e-20,15;UBERON:0002204,6.78e-17,167;UBERON:0000926,1.57e-15,315;UBERON:0004120,1.57e-15,315;UBERON:0006603,1.57e-15,315;UBERON:0002384,4.37e-15,371 | |||
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| |||
|short_description=p2@STX11 | |||
}} |
Revision as of 18:31, 13 September 2013
Short description: | p2@STX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STX11_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -13bp_to_NM_003764, uc003qks.3_5end |
EntrezGene: | STX11 |
HGNC: | 11429 |
UniProt: | O75558 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.66e-78 | 98 |
blood island | 2.66e-78 | 98 |
hemolymphoid system | 6.79e-69 | 108 |
bone marrow | 2.65e-56 | 76 |
bone element | 7.53e-51 | 82 |
immune system | 8.34e-50 | 93 |
skeletal element | 1.03e-44 | 90 |
skeletal system | 1.95e-38 | 100 |
lateral plate mesoderm | 3.68e-34 | 203 |
blood | 1.04e-20 | 15 |
haemolymphatic fluid | 1.04e-20 | 15 |
organism substance | 1.04e-20 | 15 |
musculoskeletal system | 6.78e-17 | 167 |
mesoderm | 1.57e-15 | 315 |
mesoderm-derived structure | 1.57e-15 | 315 |
presumptive mesoderm | 1.57e-15 | 315 |
connective tissue | 4.37e-15 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.