FFCP PHASE1:Mm9::chr19:8797434..8797452,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:8797434..8797452,+|id=chr19:8797434..8797452,+|ontology_enrichment_celltype=CL:0000063!2.73e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,1.09e-11,32;CL:0002032,1.09e-11,32;CL:0000037,1.09e-11,32;CL:0000837,1.09e-11,32;CL:0000049,1.88e-09,19;CL:0000034,4.12e-08,97;CL:0002320,9.35e-08,46;CL:0000134,9.35e-08,46;CL:0002250,2.78e-07,3;CL:0000068,3.72e-07,3;CL:0002202,3.72e-07,3;CL:0000069,3.72e-07,3;CL:0002632,3.72e-07,3;CL:0002368,3.72e-07,3;CL:0000307,3.72e-07,3;CL:0000377,3.72e-07,3;CL:0000557,4.21e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.35e-08,46;UBERON:0003126,3.72e-07,3;UBERON:0001005,3.72e-07,3;UBERON:0007196,3.72e-07,3;UBERON:0001558,3.72e-07,3|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.700837921786577,0.129123323441576,1.97104211012333,2.10658073689794,0,0.0797721589953364,0.171200729931206,0.611942816932982,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.496454756004426,0.783599367416806,0.319984845586813,0,0,0,0.430942465371778,0,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,1.16364251750945,2.04169356262369,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.589257170947335,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,1.5154372870785,0.253359865475099,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,5.63131085177825,10.1983464268879,6.4805815807263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,3.51106593656617,5.91900186363845,1.98914449576915,0.414251545071004,0,0,0,0.393528463494808,0,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0.42366414172764,0.661585194164886,0.49465875882444,0,0,0,0.164140899745061,0,0,0.512612642393558,0.206386867963223,0,0,0.27338845544205,0.228778173206523,2.37969801991397,3.77868921273877,2.62579950228405,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.228620419965,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0.443971906748129,0,0.503653849092235,0.772758376128762,0.187682475451182,1.28206136987086,0,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.548783918618318,0,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr19:8797434..8797452,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:8797434..8797452,+ | |||
|id=chr19:8797434..8797452,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.73e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.09e-11,32;CL:0002032,1.09e-11,32;CL:0000037,1.09e-11,32;CL:0000837,1.09e-11,32;CL:0000049,1.88e-09,19;CL:0000034,4.12e-08,97;CL:0002320,9.35e-08,46;CL:0000134,9.35e-08,46;CL:0002250,2.78e-07,3;CL:0000068,3.72e-07,3;CL:0002202,3.72e-07,3;CL:0000069,3.72e-07,3;CL:0002632,3.72e-07,3;CL:0002368,3.72e-07,3;CL:0000307,3.72e-07,3;CL:0000377,3.72e-07,3;CL:0000557,4.21e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.35e-08,46;UBERON:0003126,3.72e-07,3;UBERON:0001005,3.72e-07,3;UBERON:0007196,3.72e-07,3;UBERON:0001558,3.72e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.700837921786577,0.129123323441576,1.97104211012333,2.10658073689794,0,0.0797721589953364,0.171200729931206,0.611942816932982,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.496454756004426,0.783599367416806,0.319984845586813,0,0,0,0.430942465371778,0,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,1.16364251750945,2.04169356262369,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.589257170947335,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,1.5154372870785,0.253359865475099,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,5.63131085177825,10.1983464268879,6.4805815807263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,3.51106593656617,5.91900186363845,1.98914449576915,0.414251545071004,0,0,0,0.393528463494808,0,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0.242780636154981,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0.42366414172764,0.661585194164886,0.49465875882444,0,0,0,0.164140899745061,0,0,0.512612642393558,0.206386867963223,0,0,0.27338845544205,0.228778173206523,2.37969801991397,3.77868921273877,2.62579950228405,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.228620419965,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0.443971906748129,0,0.503653849092235,0.772758376128762,0.187682475451182,1.28206136987086,0,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.229741875822453,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.548783918618318,0,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr19:8797434..8797452,+ | |||
}} |
Revision as of 18:27, 13 September 2013
Short description: | p@chr19:8797434..8797452, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:8797434..8797452, + |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.09e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.09e-11 | 32 |
hematopoietic stem cell | 1.09e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.09e-11 | 32 |
common myeloid progenitor | 1.88e-09 | 19 |
stem cell | 4.12e-08 | 97 |
connective tissue cell | 9.35e-08 | 46 |
mesenchymal cell | 9.35e-08 | 46 |
intestinal crypt stem cell | 2.78e-07 | 3 |
duct epithelial cell | 3.72e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.72e-07 | 3 |
branched duct epithelial cell | 3.72e-07 | 3 |
epithelial cell of lower respiratory tract | 3.72e-07 | 3 |
respiratory epithelial cell | 3.72e-07 | 3 |
tracheal epithelial cell | 3.72e-07 | 3 |
tracheoblast | 3.72e-07 | 3 |
granulocyte monocyte progenitor cell | 4.21e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.35e-08 | 46 |
trachea | 3.72e-07 | 3 |
respiratory airway | 3.72e-07 | 3 |
tracheobronchial tree | 3.72e-07 | 3 |
lower respiratory tract | 3.72e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.