FFCP PHASE1:Hg19::chr6:134494700..134494714,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6446|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10810|TSSclassifier=N|UniProt=|association_with_transcript=-217bp_to_ENST00000524764_5end|description=CAGE_peak_27_at_SGK1_5end|id=chr6:134494700..134494714,-|ontology_enrichment_celltype=CL:0000766!2.43e-26!76;CL:0000557!3.87e-26!71;CL:0000839!6.36e-24!70;CL:0002009!1.98e-23!65;CL:0002194!6.77e-22!63;CL:0000576!6.77e-22!63;CL:0000040!6.77e-22!63;CL:0000559!6.77e-22!63;CL:0000860!2.42e-21!45;CL:0002057!5.42e-21!42;CL:0000763!1.05e-13!112;CL:0000049!1.05e-13!112;CL:0000738!7.10e-11!140;CL:0002031!5.06e-10!124;CL:0002087!3.27e-08!119|ontology_enrichment_celltype_v019=CL:0000860;5.56e-19;33!CL:0002057;5.56e-19;33!CL:0000097;8.77e-17;5!CL:0000473;1.11e-16;39!CL:0000234;1.11e-16;39!CL:0000766;2.30e-10;69!CL:0000576;9.03e-10;48!CL:0000163;2.22e-09;9|ontology_enrichment_celltype_v019_2=CL:0000557,2.61e-23,67;CL:0000839,5.04e-21,66;CL:0000766,5.76e-19,72;CL:0000473,2.67e-18,48;CL:0000234,2.67e-18,48;CL:0000860,3.22e-18,42;CL:0002057,3.22e-18,42;CL:0000097,1.60e-16,5;CL:0002028,1.60e-16,5;CL:0002009,1.04e-15,61;CL:0002194,4.83e-14,59;CL:0000576,4.83e-14,59;CL:0000040,4.83e-14,59;CL:0000559,4.83e-14,59;CL:0000763,5.95e-13,108;CL:0000049,5.95e-13,108;CL:0002031,2.95e-11,120;CL:0000738,1.83e-09,136;CL:0000163,3.06e-09,9;CL:0002032,2.18e-07,161;CL:0000837,2.18e-07,161;CL:0000037,6.40e-07,168|ontology_enrichment_development_v019=CL:0002057;2.88e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;3.82e-11;2|ontology_enrichment_disease_v019_2=DOID:1909,2.54e-11,2|ontology_enrichment_uberon=UBERON:0002390!1.84e-24!102;UBERON:0003061!1.84e-24!102;UBERON:0002371!4.75e-24!80;UBERON:0001474!8.57e-21!86;UBERON:0002193!1.20e-20!112;UBERON:0002405!2.98e-18!115;UBERON:0004765!4.69e-16!101;UBERON:0001434!4.69e-16!101;UBERON:0003081!3.06e-15!216;UBERON:0002204!1.43e-09!167;UBERON:0000062!1.26e-08!511;UBERON:0000467!1.45e-08!625;UBERON:0000480!1.85e-08!626;UBERON:0000468!2.66e-08!659;UBERON:0000923!2.75e-08!604;UBERON:0005291!2.75e-08!604;UBERON:0006598!2.75e-08!604;UBERON:0002532!2.75e-08!604;UBERON:0002050!3.49e-08!605;UBERON:0005423!3.49e-08!605;UBERON:0000922!1.79e-07!612|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.37e-20,76;UBERON:0001474,2.51e-18,82;UBERON:0002390,2.01e-16,98;UBERON:0003061,2.01e-16,98;UBERON:0004765,2.41e-16,90;UBERON:0002405,1.09e-15,93;UBERON:0002193,1.64e-14,108;UBERON:0001434,2.61e-14,100;UBERON:0003081,1.85e-10,203;UBERON:0002204,3.66e-10,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.284338464974843,0,1.10799081706375,0.601633342410425,0.651032612147555,0.671746422719773,0.32389366601898,0.257575567634187,0.436194716338694,0,0.727752183563449,2.55671940596253,0.822335776043652,2.78735733805593,1.1507695692886,1.2808035326455,0.236482229888585,2.06847408441971,1.29096936716765,0,1.31769637679823,0.545812300115692,0.898893937780338,1.22433556948361,0.962787081228281,4.47535988059329,0.659702600373432,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,2.26123798731069,1.0429658368404,0.65156653411535,1.21079900526674,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.336985893439485,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.327447688744282,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,3.72887606973458,0.354668382198357,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,1.07633781413317,0,0.211931901159562,0,0,1.28820270022815,0,0.168776332241266,0.0974370051611986,1.26216887122057,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,0.702012795417713,0,0,0,0,0,0,0,1.97065295158377,0.088048434013226,2.07328115540772,1.00883967391873,1.00993946741104,0.063497894292169,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.206768026122887,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-217bp_to_ENST00000524764_5end | |||
|description=CAGE_peak_27_at_SGK1_5end | |||
|id=chr6:134494700..134494714,- | |||
|ontology_enrichment_celltype=CL:0000766!2.43e-26!76;CL:0000557!3.87e-26!71;CL:0000839!6.36e-24!70;CL:0002009!1.98e-23!65;CL:0002194!6.77e-22!63;CL:0000576!6.77e-22!63;CL:0000040!6.77e-22!63;CL:0000559!6.77e-22!63;CL:0000860!2.42e-21!45;CL:0002057!5.42e-21!42;CL:0000763!1.05e-13!112;CL:0000049!1.05e-13!112;CL:0000738!7.10e-11!140;CL:0002031!5.06e-10!124;CL:0002087!3.27e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.56e-19;33!CL:0002057;5.56e-19;33!CL:0000097;8.77e-17;5!CL:0000473;1.11e-16;39!CL:0000234;1.11e-16;39!CL:0000766;2.30e-10;69!CL:0000576;9.03e-10;48!CL:0000163;2.22e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.61e-23,67;CL:0000839,5.04e-21,66;CL:0000766,5.76e-19,72;CL:0000473,2.67e-18,48;CL:0000234,2.67e-18,48;CL:0000860,3.22e-18,42;CL:0002057,3.22e-18,42;CL:0000097,1.60e-16,5;CL:0002028,1.60e-16,5;CL:0002009,1.04e-15,61;CL:0002194,4.83e-14,59;CL:0000576,4.83e-14,59;CL:0000040,4.83e-14,59;CL:0000559,4.83e-14,59;CL:0000763,5.95e-13,108;CL:0000049,5.95e-13,108;CL:0002031,2.95e-11,120;CL:0000738,1.83e-09,136;CL:0000163,3.06e-09,9;CL:0002032,2.18e-07,161;CL:0000837,2.18e-07,161;CL:0000037,6.40e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.54e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-24!102;UBERON:0003061!1.84e-24!102;UBERON:0002371!4.75e-24!80;UBERON:0001474!8.57e-21!86;UBERON:0002193!1.20e-20!112;UBERON:0002405!2.98e-18!115;UBERON:0004765!4.69e-16!101;UBERON:0001434!4.69e-16!101;UBERON:0003081!3.06e-15!216;UBERON:0002204!1.43e-09!167;UBERON:0000062!1.26e-08!511;UBERON:0000467!1.45e-08!625;UBERON:0000480!1.85e-08!626;UBERON:0000468!2.66e-08!659;UBERON:0000923!2.75e-08!604;UBERON:0005291!2.75e-08!604;UBERON:0006598!2.75e-08!604;UBERON:0002532!2.75e-08!604;UBERON:0002050!3.49e-08!605;UBERON:0005423!3.49e-08!605;UBERON:0000922!1.79e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.37e-20,76;UBERON:0001474,2.51e-18,82;UBERON:0002390,2.01e-16,98;UBERON:0003061,2.01e-16,98;UBERON:0004765,2.41e-16,90;UBERON:0002405,1.09e-15,93;UBERON:0002193,1.64e-14,108;UBERON:0001434,2.61e-14,100;UBERON:0003081,1.85e-10,203;UBERON:0002204,3.66e-10,167 | |||
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| |||
|short_description=p27@SGK1 | |||
}} |
Revision as of 18:04, 13 September 2013
Short description: | p27@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_SGK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_ENST00000524764_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.61e-23 | 67 |
myeloid lineage restricted progenitor cell | 5.04e-21 | 66 |
myeloid leukocyte | 5.76e-19 | 72 |
defensive cell | 2.67e-18 | 48 |
phagocyte | 2.67e-18 | 48 |
classical monocyte | 3.22e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-18 | 42 |
mast cell | 1.60e-16 | 5 |
basophil mast progenitor cell | 1.60e-16 | 5 |
macrophage dendritic cell progenitor | 1.04e-15 | 61 |
monopoietic cell | 4.83e-14 | 59 |
monocyte | 4.83e-14 | 59 |
monoblast | 4.83e-14 | 59 |
promonocyte | 4.83e-14 | 59 |
myeloid cell | 5.95e-13 | 108 |
common myeloid progenitor | 5.95e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 2.95e-11 | 120 |
leukocyte | 1.83e-09 | 136 |
endocrine cell | 3.06e-09 | 9 |
hematopoietic oligopotent progenitor cell | 2.18e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-07 | 161 |
hematopoietic stem cell | 6.40e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.37e-20 | 76 |
bone element | 2.51e-18 | 82 |
hematopoietic system | 2.01e-16 | 98 |
blood island | 2.01e-16 | 98 |
skeletal element | 2.41e-16 | 90 |
immune system | 1.09e-15 | 93 |
hemolymphoid system | 1.64e-14 | 108 |
skeletal system | 2.61e-14 | 100 |
lateral plate mesoderm | 1.85e-10 | 203 |
musculoskeletal system | 3.66e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.54e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.