FFCP PHASE1:Hg19::chr6:131456549..131456644,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9465 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=377 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0M2 | |||
|association_with_transcript=-161bp_to_ENST00000431975_5end | |||
|description=CAGE_peak_1_at_AKAP7_5end | |||
|id=chr6:131456549..131456644,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-10!42;CL:0002087!3.49e-10!119;CL:0000839!1.42e-09!70;CL:0000557!2.44e-09!71;CL:0002031!6.97e-09!124;CL:0000860!7.93e-09!45;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000766!1.92e-08!76;CL:0000738!6.88e-08!140;CL:0002009!1.46e-07!65;CL:0000037!5.67e-07!172;CL:0000566!5.67e-07!172;CL:0002393!9.76e-07!9;CL:0002397!9.76e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.05e-07;48!CL:0000766;6.40e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.70e-12,115;CL:0002031,1.42e-10,120;CL:0000839,1.64e-10,66;CL:0000557,1.80e-10,67;CL:0000473,1.99e-10,48;CL:0000234,1.99e-10,48;CL:0000860,2.06e-10,42;CL:0002057,2.06e-10,42;CL:0000738,1.17e-09,136;CL:0000766,1.26e-09,72;CL:0002194,1.45e-09,59;CL:0000576,1.45e-09,59;CL:0000040,1.45e-09,59;CL:0000559,1.45e-09,59;CL:0000037,1.13e-08,168;CL:0002009,1.55e-08,61;CL:0002032,4.22e-08,161;CL:0000837,4.22e-08,161;CL:0000988,3.88e-07,177;CL:0002393,6.36e-07,9;CL:0002397,6.36e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.96e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.06e-09;34!UBERON:0002020;1.06e-09;34!UBERON:0001869;1.24e-09;32!UBERON:0001893;1.36e-09;34!UBERON:0002791;2.97e-09;32!UBERON:0002780;4.75e-09;41!UBERON:0001890;4.75e-09;41!UBERON:0000073;1.16e-08;53!UBERON:0002616;1.16e-08;53!UBERON:0000956;3.21e-08;25!UBERON:0000203;3.21e-08;25!UBERON:0002619;1.53e-07;22!UBERON:0007023;2.75e-07;114!UBERON:0001950;2.77e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-22,114;UBERON:0001049,5.35e-15,56;UBERON:0005068,5.35e-15,56;UBERON:0006241,5.35e-15,56;UBERON:0007135,5.35e-15,56;UBERON:0000073,7.05e-15,53;UBERON:0002616,7.05e-15,53;UBERON:0001016,2.27e-14,89;UBERON:0001017,3.74e-14,81;UBERON:0002780,1.81e-12,41;UBERON:0001890,1.81e-12,41;UBERON:0003080,1.81e-12,41;UBERON:0006240,1.81e-12,41;UBERON:0000955,3.75e-12,68;UBERON:0006238,3.75e-12,68;UBERON:0003528,1.04e-10,34;UBERON:0002020,1.04e-10,34;UBERON:0001893,1.09e-10,34;UBERON:0001869,1.90e-10,32;UBERON:0002346,2.43e-10,86;UBERON:0002791,5.75e-10,32;UBERON:0002371,1.61e-09,76;UBERON:0003075,1.72e-09,82;UBERON:0007284,1.72e-09,82;UBERON:0001474,2.39e-08,82;UBERON:0000956,4.93e-08,25;UBERON:0000203,4.93e-08,25;UBERON:0002390,1.38e-07,98;UBERON:0003061,1.38e-07,98;UBERON:0002619,2.65e-07,22;UBERON:0003056,3.43e-07,61;UBERON:0001950,4.83e-07,20;UBERON:0002405,6.36e-07,93 | |||
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| |||
|short_description=p1@AKAP7 | |||
}} |
Revision as of 17:57, 13 September 2013
Short description: | p1@AKAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AKAP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -161bp_to_ENST00000431975_5end |
EntrezGene: | AKAP7 |
HGNC: | 377 |
UniProt: | Q9P0M2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 6.70e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.42e-10 | 120 |
myeloid lineage restricted progenitor cell | 1.64e-10 | 66 |
granulocyte monocyte progenitor cell | 1.80e-10 | 67 |
defensive cell | 1.99e-10 | 48 |
phagocyte | 1.99e-10 | 48 |
classical monocyte | 2.06e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.06e-10 | 42 |
leukocyte | 1.17e-09 | 136 |
myeloid leukocyte | 1.26e-09 | 72 |
monopoietic cell | 1.45e-09 | 59 |
monocyte | 1.45e-09 | 59 |
monoblast | 1.45e-09 | 59 |
promonocyte | 1.45e-09 | 59 |
hematopoietic stem cell | 1.13e-08 | 168 |
macrophage dendritic cell progenitor | 1.55e-08 | 61 |
hematopoietic oligopotent progenitor cell | 4.22e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-08 | 161 |
hematopoietic cell | 3.88e-07 | 177 |
intermediate monocyte | 6.36e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-22 | 114 |
neural tube | 5.35e-15 | 56 |
neural rod | 5.35e-15 | 56 |
future spinal cord | 5.35e-15 | 56 |
neural keel | 5.35e-15 | 56 |
regional part of nervous system | 7.05e-15 | 53 |
regional part of brain | 7.05e-15 | 53 |
nervous system | 2.27e-14 | 89 |
central nervous system | 3.74e-14 | 81 |
regional part of forebrain | 1.81e-12 | 41 |
forebrain | 1.81e-12 | 41 |
anterior neural tube | 1.81e-12 | 41 |
future forebrain | 1.81e-12 | 41 |
brain | 3.75e-12 | 68 |
future brain | 3.75e-12 | 68 |
brain grey matter | 1.04e-10 | 34 |
gray matter | 1.04e-10 | 34 |
telencephalon | 1.09e-10 | 34 |
cerebral hemisphere | 1.90e-10 | 32 |
neurectoderm | 2.43e-10 | 86 |
regional part of telencephalon | 5.75e-10 | 32 |
bone marrow | 1.61e-09 | 76 |
neural plate | 1.72e-09 | 82 |
presumptive neural plate | 1.72e-09 | 82 |
bone element | 2.39e-08 | 82 |
cerebral cortex | 4.93e-08 | 25 |
pallium | 4.93e-08 | 25 |
hematopoietic system | 1.38e-07 | 98 |
blood island | 1.38e-07 | 98 |
regional part of cerebral cortex | 2.65e-07 | 22 |
pre-chordal neural plate | 3.43e-07 | 61 |
neocortex | 4.83e-07 | 20 |
immune system | 6.36e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.