FFCP PHASE1:Hg19::chr6:130686742..130686749,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21574|TSSclassifier=S|UniProt=|association_with_transcript=-172bp_to_ENST00000368134,uc003qbx.2_5end|description=CAGE_peak_9_at_SAMD3_5end|id=chr6:130686742..130686749,-|ontology_enrichment_celltype=CL:1000306!7.75e-10!4;CL:0002547!7.75e-10!4;CL:0002594!7.92e-10!4;CL:0002334!8.84e-10!12;CL:0000055!1.69e-09!180;CL:0000359!1.83e-07!32;CL:0002579!4.59e-07!3;CL:0000192!4.73e-07!42;CL:0000514!4.73e-07!42|ontology_enrichment_celltype_v019=CL:0000228;5.05e-34;1!CL:0002372;5.05e-34;1!CL:1000306;5.98e-34;4!CL:0002547;5.98e-34;4!CL:0002579;2.59e-12;3!CL:0000056;1.44e-09;4!CL:0000737;1.44e-09;4|ontology_enrichment_celltype_v019_2=CL:0000228,5.05e-34,1;CL:0002372,5.05e-34,1;CL:1000306,7.07e-34,4;CL:0002547,7.07e-34,4;CL:0002579,3.24e-12,3;CL:0000737,1.44e-09,4;CL:0000515,1.44e-09,4|ontology_enrichment_development_v019=CL:0000515;1.44e-09;4|ontology_enrichment_disease=DOID:2394!1.97e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000415!7.75e-10!4;UBERON:0007240!7.75e-10!4;UBERON:0005742!7.75e-10!4;UBERON:0005734!7.75e-10!4;UBERON:0004664!7.75e-10!4;UBERON:0004663!7.75e-10!4;UBERON:0001310!7.92e-10!4;UBERON:0002118!3.60e-07!5;UBERON:0004532!3.60e-07!5|ontology_enrichment_uberon_v019=UBERON:0004797;5.98e-34;4!UBERON:0000415;5.98e-34;4!UBERON:0007240;5.98e-34;4!UBERON:0005742;5.98e-34;4!UBERON:0005734;5.98e-34;4!UBERON:0004664;5.98e-34;4!UBERON:0004663;5.98e-34;4!UBERON:0000947;6.23e-15;21!UBERON:0010191;6.23e-15;21!UBERON:0004573;1.27e-09;33!UBERON:0004571;1.27e-09;33!UBERON:0001637;1.04e-07;42!UBERON:0003509;1.04e-07;42!UBERON:0004572;1.04e-07;42!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.07e-34,4;UBERON:0007240,7.07e-34,4;UBERON:0005742,7.07e-34,4;UBERON:0005734,7.07e-34,4;UBERON:0004664,7.07e-34,4;UBERON:0004663,7.07e-34,4;UBERON:0004797,7.13e-20,7;UBERON:0000947,6.23e-15,21;UBERON:0010191,6.23e-15,21;UBERON:0004573,8.77e-10,33;UBERON:0004571,8.77e-10,33;UBERON:0001637,7.76e-08,42;UBERON:0003509,7.76e-08,42;UBERON:0004572,7.76e-08,42;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,3.97227542439656,1.14734648299525,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0.843881661206331,0.292311015483596,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.682986574053893,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0|short_description=p9@SAMD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=154075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21574 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-172bp_to_ENST00000368134,uc003qbx.2_5end | |||
|description=CAGE_peak_9_at_SAMD3_5end | |||
|id=chr6:130686742..130686749,- | |||
|ontology_enrichment_celltype=CL:1000306!7.75e-10!4;CL:0002547!7.75e-10!4;CL:0002594!7.92e-10!4;CL:0002334!8.84e-10!12;CL:0000055!1.69e-09!180;CL:0000359!1.83e-07!32;CL:0002579!4.59e-07!3;CL:0000192!4.73e-07!42;CL:0000514!4.73e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000228;5.05e-34;1!CL:0002372;5.05e-34;1!CL:1000306;5.98e-34;4!CL:0002547;5.98e-34;4!CL:0002579;2.59e-12;3!CL:0000056;1.44e-09;4!CL:0000737;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,5.05e-34,1;CL:0002372,5.05e-34,1;CL:1000306,7.07e-34,4;CL:0002547,7.07e-34,4;CL:0002579,3.24e-12,3;CL:0000737,1.44e-09,4;CL:0000515,1.44e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.44e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.97e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!7.75e-10!4;UBERON:0007240!7.75e-10!4;UBERON:0005742!7.75e-10!4;UBERON:0005734!7.75e-10!4;UBERON:0004664!7.75e-10!4;UBERON:0004663!7.75e-10!4;UBERON:0001310!7.92e-10!4;UBERON:0002118!3.60e-07!5;UBERON:0004532!3.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.98e-34;4!UBERON:0000415;5.98e-34;4!UBERON:0007240;5.98e-34;4!UBERON:0005742;5.98e-34;4!UBERON:0005734;5.98e-34;4!UBERON:0004664;5.98e-34;4!UBERON:0004663;5.98e-34;4!UBERON:0000947;6.23e-15;21!UBERON:0010191;6.23e-15;21!UBERON:0004573;1.27e-09;33!UBERON:0004571;1.27e-09;33!UBERON:0001637;1.04e-07;42!UBERON:0003509;1.04e-07;42!UBERON:0004572;1.04e-07;42!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.07e-34,4;UBERON:0007240,7.07e-34,4;UBERON:0005742,7.07e-34,4;UBERON:0005734,7.07e-34,4;UBERON:0004664,7.07e-34,4;UBERON:0004663,7.07e-34,4;UBERON:0004797,7.13e-20,7;UBERON:0000947,6.23e-15,21;UBERON:0010191,6.23e-15,21;UBERON:0004573,8.77e-10,33;UBERON:0004571,8.77e-10,33;UBERON:0001637,7.76e-08,42;UBERON:0003509,7.76e-08,42;UBERON:0004572,7.76e-08,42;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,3.97227542439656,1.14734648299525,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0.843881661206331,0.292311015483596,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0.150257608997218,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.682986574053893,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p9@SAMD3 | |||
}} |
Revision as of 17:56, 13 September 2013
Short description: | p9@SAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -172bp_to_ENST00000368134, uc003qbx.2_5end |
EntrezGene: | SAMD3 |
HGNC: | 21574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 5.05e-34 | 1 |
myotube | 5.05e-34 | 1 |
fibroblast of tunica adventitia of artery | 7.07e-34 | 4 |
fibroblast of the aortic adventitia | 7.07e-34 | 4 |
omentum preadipocyte | 3.24e-12 | 3 |
striated muscle cell | 1.44e-09 | 4 |
skeletal muscle myoblast | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.07e-34 | 4 |
tunica adventitia of artery | 7.07e-34 | 4 |
adventitia | 7.07e-34 | 4 |
tunica adventitia of blood vessel | 7.07e-34 | 4 |
aorta tunica adventitia | 7.07e-34 | 4 |
aorta wall | 7.07e-34 | 4 |
blood vessel layer | 7.13e-20 | 7 |
aorta | 6.23e-15 | 21 |
aortic system | 6.23e-15 | 21 |
systemic artery | 8.77e-10 | 33 |
systemic arterial system | 8.77e-10 | 33 |
artery | 7.76e-08 | 42 |
arterial blood vessel | 7.76e-08 | 42 |
arterial system | 7.76e-08 | 42 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.