FFCP PHASE1:Hg19::chr6:125283242..125283303,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21487|TSSclassifier=S|UniProt=F2Z2M4|association_with_transcript=-387bp_to_ENST00000521654_5end|coexpression_cluster_id=C383|description=CAGE_peak_2_at_RNF217_5end|id=chr6:125283242..125283303,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.20e-14!365;UBERON:0000468!1.41e-13!659;UBERON:0000481!4.27e-10!347;UBERON:0000119!1.13e-09!312;UBERON:0000477!1.38e-09!286;UBERON:0000467!3.06e-09!625;UBERON:0000483!4.71e-09!309;UBERON:0000480!5.32e-09!626;UBERON:0000922!1.27e-08!612;UBERON:0004111!1.84e-08!241;UBERON:0002100!2.55e-08!216;UBERON:0000033!7.98e-08!123;UBERON:0002050!2.26e-07!605;UBERON:0005423!2.26e-07!605;UBERON:0000025!2.37e-07!194;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0000923!3.27e-07!604;UBERON:0005291!3.27e-07!604;UBERON:0006598!3.27e-07!604;UBERON:0002532!3.27e-07!604;UBERON:0005256!5.11e-07!143|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.23e-07,309;UBERON:0002100,3.50e-07,199;UBERON:0003104,6.02e-07,160;UBERON:0009142,6.02e-07,160;UBERON:0000483,8.46e-07,306|phase1_expression=1.63510541343501,2.5692062866918,3.10099689011137,1.0007329835313,4.91657203870017,0.872338524100369,2.53299878168311,1.26343974685366,1.30592814099919,0.491467873003018,2.79120467188971,1.96597234917155,0.791300934685361,0.123766352960047,0.331397375727916,0,1.80808358407193,0,0.487932798790507,1.60057375499824,2.04000691244253,1.25381888591235,1.71741592278634,2.6006140763848,5.52387614217132,0,0,0.0787107813136792,0.786728553697808,0,0.464448369948228,1.83884244895785,1.8072355126695,1.10926203050036,0,0,0.587200878669695,0,0.401088894940283,0.868043482863407,0.223915474239924,0.971680998056939,0.77272670290256,1.89017710413434,0.755751887377619,1.69808842831471,0.929716147622738,0.411167888021826,0.619412741790207,0.28769239232215,0,1.18241114944293,0.344745680736619,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.449446968890169,0,0.320929027076094,0.639337125799041,3.29851300186716,1.19678194572979,1.27867425159808,0,1.13477044938228,0.622822248995575,1.25624332628372,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,1.80212271409808,0.32145117339416,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,1.2786256184353,0.722878304769133,1.50401373190767,1.73815822752988,0,1.45990461090791,2.6469748805939,2.66075276955077,5.27008714158756,1.11332214173056,0.364295288292542,0,0.649094787309367,0.348259474598534,0.398873881556595,0.476981248610684,0,0,1.59009925893364,0.860234595106124,0.347140501607594,1.69592382577203,0.838998872419812,1.10047216776027,1.04497483268405,1.8089173141853,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,2.19655851793353,0.735326160691737,1.62028389576352,1.42879565254528,1.34717623575702,1.23872628531654,0,0,0.916008719652036,0,0,0.872188104285069,1.49091585508596,1.13967460498122,2.78059279707759,3.44203944898576,1.06400514659507,1.12135520028461,1.06748995729705,1.2333377420858,0.933633106199299,3.09834545760283,1.79808093424805,2.72443369760877,1.72852777344,2.81185718200556,0,1.1409436430889,1.19558944441441,0.704606991862589,0.809364721840658,0.421352420106746,0.204154171254893,0.982674538494144,0.619954687054593,0,1.97813543422845,0,0.718618141816238,0.673344455816265,1.00094815897571,0.831192346452549,1.31693286264251,1.83892677479412,2.25357088359895,0.907457465280168,2.51145489964407,1.2813443329114,0.635795703478686,0.300091096084402,0.515262646192195,3.09168648054755,0.37223371266318,1.35021065793013,0.584622030967192,2.27190396819703,0.920498986422993,1.2931684545505,3.19508633264953,0.604512589365842,1.01736355386293,1.35282597214308,1.63647672354501,0.573609190778008,1.70763188581434,1.72288698817931,1.85910308591229,1.65857688024593,1.00928340350251,2.18986415445498,1.56449532329816,1.92972281457866,0,2.78620756819187,0,0.709840800239063,0.842923450390509,0.964044119533928,0.772057809126758,0.653638332277218,0.949082476444386,0.808987848960987,0.588664395376038,0.38474715694639,1.4763109092493,1.40241773803446,0.4115740113314,0,2.53510069643662,0.982827216677626,1.77236972004421,0,0,1.20097467208968,0.548751427043128,0,0.301586917234893,0.555530670951178,0.977424915930974,0,1.44331342025273,1.97081688457631,1.76113041353732,0.721832238805369,1.85194205030644,0.951270761172991,0,0,0.984868024349589,0.702012795417713,0.743155811443641,1.87467667973554,0.839910640994298,1.27597587518148,0.985143749731331,0,1.916913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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |||
|TSSclassifier=S | |||
|UniProt=F2Z2M4 | |||
|association_with_transcript=-387bp_to_ENST00000521654_5end | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_2_at_RNF217_5end | |||
|id=chr6:125283242..125283303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.20e-14!365;UBERON:0000468!1.41e-13!659;UBERON:0000481!4.27e-10!347;UBERON:0000119!1.13e-09!312;UBERON:0000477!1.38e-09!286;UBERON:0000467!3.06e-09!625;UBERON:0000483!4.71e-09!309;UBERON:0000480!5.32e-09!626;UBERON:0000922!1.27e-08!612;UBERON:0004111!1.84e-08!241;UBERON:0002100!2.55e-08!216;UBERON:0000033!7.98e-08!123;UBERON:0002050!2.26e-07!605;UBERON:0005423!2.26e-07!605;UBERON:0000025!2.37e-07!194;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0000923!3.27e-07!604;UBERON:0005291!3.27e-07!604;UBERON:0006598!3.27e-07!604;UBERON:0002532!3.27e-07!604;UBERON:0005256!5.11e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.23e-07,309;UBERON:0002100,3.50e-07,199;UBERON:0003104,6.02e-07,160;UBERON:0009142,6.02e-07,160;UBERON:0000483,8.46e-07,306 | |||
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| |||
|short_description=p2@RNF217 | |||
}} |
Revision as of 17:47, 13 September 2013
Short description: | p2@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RNF217_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -387bp_to_ENST00000521654_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | F2Z2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 2.23e-07 | 309 |
trunk | 3.50e-07 | 199 |
mesenchyme | 6.02e-07 | 160 |
entire embryonic mesenchyme | 6.02e-07 | 160 |
epithelium | 8.46e-07 | 306 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.