FFCP PHASE1:Mm9::chr19:4269239..4269292,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245857|HGNC=|UniProt=Q8K330|association_with_transcript=-67bp_to_ENSMUST00000037992,ENSMUST00000113852,NM_198113,uc008fzo.1,uc008fzp.1,uc008fzq.1,uc012bgi.1_5end|description=CAGE_peak_2_at_Ssh3_5end|id=chr19:4269239..4269292,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.79e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-07,51;UBERON:0000073,9.59e-07,54|phase1_expression=7.36684696682052,3.83872948403297,4.09499315450582,2.72217790176147,2.50447864973174,2.68606835059024,2.33612640595526,1.80772652818207,0.140788722151667,0.70219357896598,0.513653904676515,0.717949430958028,1.54080656938085,2.36035086531293,1.99865857089398,2.22722794128809,0,5.20512572841092,4.11343300817216,5.09267582157636,3.57181818634493,0.0992909512008853,0.261199789138935,2.71987118748791,2.52350209173887,2.29692785646008,1.7230479846363,3.66301095566011,1.52018735565099,1.51218077855958,5.09980174507201,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0.408338712524738,11.3003540298965,3.906676722619,2.61761871986899,9.41170380849623,9.56263678941824,14.0798002379035,14.2263404312402,15.0037858204882,8.07605709511399,13.3006528539167,2.18025156380447,4.83309602015838,3.69416808241138,6.7193482380174,4.31257693094915,6.04017381807851,2.17608642603403,1.34437519656986,1.80081605225163,2.86533439938757,2.57836046138721,0.606949382578793,0.528990979272033,0.633831403506179,8.13226876965917,12.450127145556,17.5480444869873,12.8552627133707,22.7353636782752,8.08920298399693,7.30014780110954,0.311068836925433,0.675029691658453,0.420649922702764,7.7125765789027,5.52171352379034,0.122490799214954,0.0958454710182364,0,3.30347642998166,7.2781782708557,5.37622866396852,1.18697658957174,0.365950574409639,1.04182674111352,9.49222196604695,6.19038871034848,8.55670187550137,4.71405736757868,4.8406371471695,0.931997229126503,1.4387976733305,1.20914496170857,2.02905142091174,0.860423876981386,1.3599426674155,1.07940638327563,0,0.896053774194671,1.54488862144927,5.11290967734173,4.67614808285164,2.82671659608272,3.52108549441701,2.56652954828636,5.09610479413291,0,3.46385665617943,2.28023878927589,3.53867111510348,1.94112595522402,2.58937883647172,5.93768556259299,0.693941307064543,1.52232739156071,2.07553947530453,1.3565037649736,2.82212897125692,3.64433114856059,6.17987419335935,2.60278842455841,0.884610551949874,1.45590164952668,1.32504911076236,0.969750506270444,3.72783522436244,10.2473278954042,4.39838084308256,3.83185582812887,1.55759661857696,1.19980546198682,2.54140454146129,11.833460512981,7.77751024791665,1.7591609295801,14.0797699355744,16.1100738118108,7.89594569326328,9.73447578406546,2.85150218780886,2.23932547098167,3.0326731012041,2.52530227063769,1.56144531555244,1.60931473103431,1.0803727788321,1.05493372485001,1.63287597963187,0.768682321709099,1.12442069471675,3.88055056108524,0.431135985865684,2.45837904218165,3.69497360744293,6.35667624039967,11.6779844674751,9.4028084960985,4.7329891373827,3.38358253591438,2.1066395619397,1.80143534980301,1.13665399758237,0.414251545071004,0.469052119962192,1.2604344302271,1.89395788468168,2.36117078096885,1.07986979021165,0.697601834251224,0.268273401399619,0.700592054203017,1.48103864922132,0.820837320395476,1.37816976227955,1.16959989940266,1.3173006917463,1.07365135008297,14.2997165023607,1.64647379806855,1.65209391491899,1.32225283331772,1.2797295032114,1.85789337488351,2.19074684247559,2.01683524623343,3.33567065767305,2.47293313946327,1.89811624617805,2.47048432086016,4.27269854960458,4.97391180102877,3.50935356814416,1.79763881730844,2.37751854862164,2.19055400579804,0.948339504765408,0.799739588268102,2.25415471346161,1.4255592949172,1.55161989734101,2.80543279561274,1.70738650235495,1.47610147979602,2.98297582898612,1.60416313098341,1.48226313543574,0.500535317148282,0.393117990226406,0.449724224769707,1.01430060694251,1.4470629585145,1.52775511068852,1.72617682470486,1.78348749452539,1.64736847912849,2.87536413054709,1.86070473834252,1.5601883655728,2.02063102357689,1.61457672169721,2.41221760681684,5.17308932466493,1.32643988239339,2.28150967018836,1.01847051465113,2.11221223459652,3.51763140627813,2.85652369063216,3.31727201358258,2.52216230569906,3.76489972402917,3.82691444777969,2.78567635016755,2.93564469172023,2.60368305446721,9.04747703635634,12.5098307278303,5.90117127622843,3.31124095565679,9.79358598925531,7.3843362553088,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.955875191810208,0.668396022247182,0.283076530788832,0,2.04579100537918,0.395287777946524,3.53453448063988,3.69044221541498,5.34196811001766,3.25773918707152,6.43383479592888,5.30980553359851,2.18502572539483,2.72091201268276,1.69744571780308,2.95301892880773,2.76691633149535,1.80899805217755,0.727067458955011,2.49548164869305,2.21225730555071,4.21674434299995,3.09406629744561,4.76615448055303,1.26042765821917,4.13947788104814,4.92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| ||
|EntrezGene=245857 | |||
|HGNC= | |||
|UniProt=Q8K330 | |||
|association_with_transcript=-67bp_to_ENSMUST00000037992,ENSMUST00000113852,NM_198113,uc008fzo.1,uc008fzp.1,uc008fzq.1,uc012bgi.1_5end | |||
|description=CAGE_peak_2_at_Ssh3_5end | |||
|id=chr19:4269239..4269292,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-07,51;UBERON:0000073,9.59e-07,54 | |||
|phase1_expression=7.36684696682052,3.83872948403297,4.09499315450582,2.72217790176147,2.50447864973174,2.68606835059024,2.33612640595526,1.80772652818207,0.140788722151667,0.70219357896598,0.513653904676515,0.717949430958028,1.54080656938085,2.36035086531293,1.99865857089398,2.22722794128809,0,5.20512572841092,4.11343300817216,5.09267582157636,3.57181818634493,0.0992909512008853,0.261199789138935,2.71987118748791,2.52350209173887,2.29692785646008,1.7230479846363,3.66301095566011,1.52018735565099,1.51218077855958,5.09980174507201,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0.408338712524738,11.3003540298965,3.906676722619,2.61761871986899,9.41170380849623,9.56263678941824,14.0798002379035,14.2263404312402,15.0037858204882,8.07605709511399,13.3006528539167,2.18025156380447,4.83309602015838,3.69416808241138,6.7193482380174,4.31257693094915,6.04017381807851,2.17608642603403,1.34437519656986,1.80081605225163,2.86533439938757,2.57836046138721,0.606949382578793,0.528990979272033,0.633831403506179,8.13226876965917,12.450127145556,17.5480444869873,12.8552627133707,22.7353636782752,8.08920298399693,7.30014780110954,0.311068836925433,0.675029691658453,0.420649922702764,7.7125765789027,5.52171352379034,0.122490799214954,0.0958454710182364,0,3.30347642998166,7.2781782708557,5.37622866396852,1.18697658957174,0.365950574409639,1.04182674111352,9.49222196604695,6.19038871034848,8.55670187550137,4.71405736757868,4.8406371471695,0.931997229126503,1.4387976733305,1.20914496170857,2.02905142091174,0.860423876981386,1.3599426674155,1.07940638327563,0,0.896053774194671,1.54488862144927,5.11290967734173,4.67614808285164,2.82671659608272,3.52108549441701,2.56652954828636,5.09610479413291,0,3.46385665617943,2.28023878927589,3.53867111510348,1.94112595522402,2.58937883647172,5.93768556259299,0.693941307064543,1.52232739156071,2.07553947530453,1.3565037649736,2.82212897125692,3.64433114856059,6.17987419335935,2.60278842455841,0.884610551949874,1.45590164952668,1.32504911076236,0.969750506270444,3.72783522436244,10.2473278954042,4.39838084308256,3.83185582812887,1.55759661857696,1.19980546198682,2.54140454146129,11.833460512981,7.77751024791665,1.7591609295801,14.0797699355744,16.1100738118108,7.89594569326328,9.73447578406546,2.85150218780886,2.23932547098167,3.0326731012041,2.52530227063769,1.56144531555244,1.60931473103431,1.0803727788321,1.05493372485001,1.63287597963187,0.768682321709099,1.12442069471675,3.88055056108524,0.431135985865684,2.45837904218165,3.69497360744293,6.35667624039967,11.6779844674751,9.4028084960985,4.7329891373827,3.38358253591438,2.1066395619397,1.80143534980301,1.13665399758237,0.414251545071004,0.469052119962192,1.2604344302271,1.89395788468168,2.36117078096885,1.07986979021165,0.697601834251224,0.268273401399619,0.700592054203017,1.48103864922132,0.820837320395476,1.37816976227955,1.16959989940266,1.3173006917463,1.07365135008297,14.2997165023607,1.64647379806855,1.65209391491899,1.32225283331772,1.2797295032114,1.85789337488351,2.19074684247559,2.01683524623343,3.33567065767305,2.47293313946327,1.89811624617805,2.47048432086016,4.27269854960458,4.97391180102877,3.50935356814416,1.79763881730844,2.37751854862164,2.19055400579804,0.948339504765408,0.799739588268102,2.25415471346161,1.4255592949172,1.55161989734101,2.80543279561274,1.70738650235495,1.47610147979602,2.98297582898612,1.60416313098341,1.48226313543574,0.500535317148282,0.393117990226406,0.449724224769707,1.01430060694251,1.4470629585145,1.52775511068852,1.72617682470486,1.78348749452539,1.64736847912849,2.87536413054709,1.86070473834252,1.5601883655728,2.02063102357689,1.61457672169721,2.41221760681684,5.17308932466493,1.32643988239339,2.28150967018836,1.01847051465113,2.11221223459652,3.51763140627813,2.85652369063216,3.31727201358258,2.52216230569906,3.76489972402917,3.82691444777969,2.78567635016755,2.93564469172023,2.60368305446721,9.04747703635634,12.5098307278303,5.90117127622843,3.31124095565679,9.79358598925531,7.3843362553088,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.955875191810208,0.668396022247182,0.283076530788832,0,2.04579100537918,0.395287777946524,3.53453448063988,3.69044221541498,5.34196811001766,3.25773918707152,6.43383479592888,5.30980553359851,2.18502572539483,2.72091201268276,1.69744571780308,2.95301892880773,2.76691633149535,1.80899805217755,0.727067458955011,2.49548164869305,2.21225730555071,4.21674434299995,3.09406629744561,4.76615448055303,1.26042765821917,4.13947788104814,4.92975180572662,4.07882537377229,3.74574516964348,4.44282355625727,2.43571959291679,7.27482294997502,18.85305430688,2.8668691747145,9.8931751764888,6.29711264114032,5.48847616846218,11.340372680298,12.8029901801148,2.33184669303881,5.56275906031529,2.05045056957423,1.857481811669,2.03713980106683,1.88368457004691,1.23024804948923,1.14389086603261,3.73952545986482,5.45810664062266,4.83699908315483,1.90934123603023,2.84702394223022,3.45643094115643,3.24016022465404,6.06356058441959,3.71216358368502,2.69728692769641,3.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| |||
|short_description=p2@Ssh3 | |||
}} | |||
Revision as of 17:40, 13 September 2013
| Short description: | p2@Ssh3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Ssh3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -67bp_to_ENSMUST00000037992, ENSMUST00000113852, NM_198113, uc008fzo.1, uc008fzp.1, uc008fzq.1, uc012bgi.1_5end |
| EntrezGene: | Ssh3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.70e-07 | 51 |
| regional part of nervous system | 9.59e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
