FFCP PHASE1:Mm9::chr19:38339251..38339321,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56839|HGNC=|MCL_coexpression_id=1|UniProt=Q9JIA1|association_with_transcript=0bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1,uc008hjj.1,uc008hjk.1_5end|description=CAGE_peak_1_at_Lgi1_5end|id=chr19:38339251..38339321,+|ontology_enrichment_celltype=CL:0000117!4.02e-09!23;CL:0000337!4.02e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.18e-10,23;CL:0000337,9.18e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!9.52e-21!63;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.17e-18!52;UBERON:0005068!3.17e-18!52;UBERON:0006241!3.17e-18!52;UBERON:0007135!3.17e-18!52;UBERON:0003056!2.90e-17!49;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002616!1.33e-16!49;UBERON:0002020!7.87e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0001017!2.64e-14!73;UBERON:0005743!2.64e-14!73;UBERON:0003080!7.15e-14!40;UBERON:0002780!2.95e-13!39;UBERON:0001890!2.95e-13!39;UBERON:0006240!2.95e-13!39;UBERON:0002791!3.96e-12!29;UBERON:0003528!3.96e-12!29;UBERON:0001893!3.96e-12!29;UBERON:0007811!6.43e-11!86;UBERON:0000153!3.24e-10!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002619!4.71e-08!17;UBERON:0000956!8.75e-08!21;UBERON:0001869!8.75e-08!21;UBERON:0000203!8.75e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.77e-23,64;UBERON:0003075,5.77e-23,64;UBERON:0007284,5.77e-23,64;UBERON:0000073,7.91e-22,54;UBERON:0001049,2.67e-20,52;UBERON:0005068,2.67e-20,52;UBERON:0006241,2.67e-20,52;UBERON:0007135,2.67e-20,52;UBERON:0010371,1.23e-19,73;UBERON:0003056,2.05e-18,49;UBERON:0004121,4.83e-18,95;UBERON:0000924,4.83e-18,95;UBERON:0006601,4.83e-18,95;UBERON:0001017,9.74e-18,73;UBERON:0010314,1.10e-17,92;UBERON:0002020,4.50e-17,34;UBERON:0001016,8.68e-17,75;UBERON:0000955,1.09e-16,47;UBERON:0006238,1.09e-16,47;UBERON:0002616,5.76e-16,46;UBERON:0003080,4.82e-14,40;UBERON:0003528,1.50e-13,29;UBERON:0002791,1.50e-13,29;UBERON:0001893,1.50e-13,29;UBERON:0002780,2.77e-13,39;UBERON:0001890,2.77e-13,39;UBERON:0006240,2.77e-13,39;UBERON:0002021,5.29e-11,10;UBERON:0000411,5.29e-11,10;UBERON:0001950,5.29e-11,10;UBERON:0002619,2.02e-08,17;UBERON:0000956,5.44e-08,21;UBERON:0001869,5.44e-08,21;UBERON:0000203,5.44e-08,21;UBERON:0002420,2.32e-07,8;UBERON:0007245,2.32e-07,8;UBERON:0010009,2.32e-07,8;UBERON:0010011,2.32e-07,8;UBERON:0000454,2.32e-07,8;UBERON:0003076,3.89e-07,12;UBERON:0003057,3.89e-07,12|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,2.57085885963423,6.40518768759679,1.22490799214954,0.958454710182364,0.919218786610021,7.70811166995721,18.386976684267,18.4327839907492,3.29715719325485,3.7509933876988,5.73004707612436,13.6799669510677,14.069065250792,19.4053774676549,11.490514833473,17.2269733766915,7.08317894136142,0.605809546665472,0.982430281388212,0,0,0,0,0,0,2.66844398250329,0,0,0,2.39433813620357,0,0,0,0,0,0,1.1418387971906,0,1.33597925158342,2.25530924795977,2.43572382649713,1.84492397804847,1.65794904607885,2.58695155698551,0.376999773989026,0,0.722996784599558,0,1.13236794963186,0.220841518460394,0,0,33.9625724533395,43.3554683103852,0,0,0,0,29.6585466021549,37.0575488283087,7.28795242254614,62.4029309490273,58.3031242713154,22.648896856992,29.3656686152641,1.62942982160506,0.248813941220186,0,1.47309299120532,3.12289063110489,2.5289231487682,3.06105620669094,2.56198190320716,2.4493139694478,1.7935920839879,1.78033276663485,2.58703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,0,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,1.02339991197733,0.658650345873152,0.805238512562231,49.8387178096982,5.45394445610208,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,1.25673363870702,2.25415471346161,1.22190796707189,1.16371492300575,0.98190147846446,0.505892296994058,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,0,31.9495674075706,30.006191767604,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,9.96096080907602,0.283880170416537,1.95872164033981,3.90928702448583,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.36012218806262,0.129358683782755,1.07168517515796,1.24138163549592,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.882113592219848,0.49465875882444,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,31.1514507377656,0.170870880797853,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,0,0.404593039154462,0.991841468704031,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.704143431874524,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,1.50471631210609,35.5793660848752,51.0961012522966,41.2484769676366,44.6818274093588,65.082839378211,61.1869056885657,60.0770025206307,49.9856535578885,45.3142408984205,37.7965027578829,0,0.798049746802062,2.56100408631201,2.18796045361465,2.30574478890781,1.2869045591501,3.33370091702423,3.5025959730612,2.24643446714271,3.53776096469316,3.29523089857312,3.77252682772152,2.71560371662659,2.04880487695582,2.01024141344646,2.85776214769844,2.0859178670074,2.31491064556446,1.64834360321323,1.61918812147837,3.42869252385415,1.06485483695602,1.43061713968393,3.0522747492789,2.54095327121393,1.4384483341585,2.37806364734604,1.05227884575137,2.98769050460896,1.68342681497322,2.25406534435931,0.985044823755635,1.63692417267876,1.39443157067369,2.12197272079256,1.99848462350357,1.87145286756327,2.36358159453128,3.63447830930802,2.20591419119516,2.08681052058379|short_description=p1@Lgi1}} | ||
|EntrezGene=56839 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9JIA1 | |||
|association_with_transcript=0bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1,uc008hjj.1,uc008hjk.1_5end | |||
|description=CAGE_peak_1_at_Lgi1_5end | |||
|id=chr19:38339251..38339321,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.02e-09!23;CL:0000337!4.02e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.18e-10,23;CL:0000337,9.18e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!9.52e-21!63;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.17e-18!52;UBERON:0005068!3.17e-18!52;UBERON:0006241!3.17e-18!52;UBERON:0007135!3.17e-18!52;UBERON:0003056!2.90e-17!49;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002616!1.33e-16!49;UBERON:0002020!7.87e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0001017!2.64e-14!73;UBERON:0005743!2.64e-14!73;UBERON:0003080!7.15e-14!40;UBERON:0002780!2.95e-13!39;UBERON:0001890!2.95e-13!39;UBERON:0006240!2.95e-13!39;UBERON:0002791!3.96e-12!29;UBERON:0003528!3.96e-12!29;UBERON:0001893!3.96e-12!29;UBERON:0007811!6.43e-11!86;UBERON:0000153!3.24e-10!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002619!4.71e-08!17;UBERON:0000956!8.75e-08!21;UBERON:0001869!8.75e-08!21;UBERON:0000203!8.75e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.77e-23,64;UBERON:0003075,5.77e-23,64;UBERON:0007284,5.77e-23,64;UBERON:0000073,7.91e-22,54;UBERON:0001049,2.67e-20,52;UBERON:0005068,2.67e-20,52;UBERON:0006241,2.67e-20,52;UBERON:0007135,2.67e-20,52;UBERON:0010371,1.23e-19,73;UBERON:0003056,2.05e-18,49;UBERON:0004121,4.83e-18,95;UBERON:0000924,4.83e-18,95;UBERON:0006601,4.83e-18,95;UBERON:0001017,9.74e-18,73;UBERON:0010314,1.10e-17,92;UBERON:0002020,4.50e-17,34;UBERON:0001016,8.68e-17,75;UBERON:0000955,1.09e-16,47;UBERON:0006238,1.09e-16,47;UBERON:0002616,5.76e-16,46;UBERON:0003080,4.82e-14,40;UBERON:0003528,1.50e-13,29;UBERON:0002791,1.50e-13,29;UBERON:0001893,1.50e-13,29;UBERON:0002780,2.77e-13,39;UBERON:0001890,2.77e-13,39;UBERON:0006240,2.77e-13,39;UBERON:0002021,5.29e-11,10;UBERON:0000411,5.29e-11,10;UBERON:0001950,5.29e-11,10;UBERON:0002619,2.02e-08,17;UBERON:0000956,5.44e-08,21;UBERON:0001869,5.44e-08,21;UBERON:0000203,5.44e-08,21;UBERON:0002420,2.32e-07,8;UBERON:0007245,2.32e-07,8;UBERON:0010009,2.32e-07,8;UBERON:0010011,2.32e-07,8;UBERON:0000454,2.32e-07,8;UBERON:0003076,3.89e-07,12;UBERON:0003057,3.89e-07,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,2.57085885963423,6.40518768759679,1.22490799214954,0.958454710182364,0.919218786610021,7.70811166995721,18.386976684267,18.4327839907492,3.29715719325485,3.7509933876988,5.73004707612436,13.6799669510677,14.069065250792,19.4053774676549,11.490514833473,17.2269733766915,7.08317894136142,0.605809546665472,0.982430281388212,0,0,0,0,0,0,2.66844398250329,0,0,0,2.39433813620357,0,0,0,0,0,0,1.1418387971906,0,1.33597925158342,2.25530924795977,2.43572382649713,1.84492397804847,1.65794904607885,2.58695155698551,0.376999773989026,0,0.722996784599558,0,1.13236794963186,0.220841518460394,0,0,33.9625724533395,43.3554683103852,0,0,0,0,29.6585466021549,37.0575488283087,7.28795242254614,62.4029309490273,58.3031242713154,22.648896856992,29.3656686152641,1.62942982160506,0.248813941220186,0,1.47309299120532,3.12289063110489,2.5289231487682,3.06105620669094,2.56198190320716,2.4493139694478,1.7935920839879,1.78033276663485,2.58703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,0,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,1.02339991197733,0.658650345873152,0.805238512562231,49.8387178096982,5.45394445610208,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,1.25673363870702,2.25415471346161,1.22190796707189,1.16371492300575,0.98190147846446,0.505892296994058,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,0,31.9495674075706,30.006191767604,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,9.96096080907602,0.283880170416537,1.95872164033981,3.90928702448583,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.36012218806262,0.129358683782755,1.07168517515796,1.24138163549592,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.882113592219848,0.49465875882444,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,31.1514507377656,0.170870880797853,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,0,0.404593039154462,0.991841468704031,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.704143431874524,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,1.50471631210609,35.5793660848752,51.0961012522966,41.2484769676366,44.6818274093588,65.082839378211,61.1869056885657,60.0770025206307,49.9856535578885,45.3142408984205,37.7965027578829,0,0.798049746802062,2.56100408631201,2.18796045361465,2.30574478890781,1.2869045591501,3.33370091702423,3.5025959730612,2.24643446714271,3.53776096469316,3.29523089857312,3.77252682772152,2.71560371662659,2.04880487695582,2.01024141344646,2.85776214769844,2.0859178670074,2.31491064556446,1.64834360321323,1.61918812147837,3.42869252385415,1.06485483695602,1.43061713968393,3.0522747492789,2.54095327121393,1.4384483341585,2.37806364734604,1.05227884575137,2.98769050460896,1.68342681497322,2.25406534435931,0.985044823755635,1.63692417267876,1.39443157067369,2.12197272079256,1.99848462350357,1.87145286756327,2.36358159453128,3.63447830930802,2.20591419119516,2.08681052058379 | |||
|short_description=p1@Lgi1 | |||
}} |
Revision as of 17:31, 13 September 2013
Short description: | p1@Lgi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lgi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000087252, ENSMUST00000134832, NM_020278, uc008hji.1, uc008hjj.1, uc008hjk.1_5end |
EntrezGene: | Lgi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.18e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.18e-10 | 23 |
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