FFCP PHASE1:Hg19::chr6:108882076..108882087,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2309|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3821|TSSclassifier=S|UniProt=O43524|association_with_transcript=7bp_to_ENST00000406360,NM_001455,uc003psm.2_5end|description=CAGE_peak_6_at_FOXO3_5end|id=chr6:108882076..108882087,+|ontology_enrichment_celltype=CL:0002057!4.82e-14!42;CL:0000766!1.00e-12!76;CL:0000860!2.37e-12!45;CL:0000839!3.23e-11!70;CL:0000557!2.36e-10!71;CL:0002009!1.13e-09!65;CL:0002194!3.77e-09!63;CL:0000576!3.77e-09!63;CL:0000040!3.77e-09!63;CL:0000559!3.77e-09!63|ontology_enrichment_celltype_v019=CL:0000860;5.29e-14;33!CL:0002057;5.29e-14;33!CL:0000766;2.44e-11;69!CL:0000473;3.34e-11;39!CL:0000234;3.34e-11;39!CL:0000576;3.06e-10;48!CL:0000775;7.08e-08;3!CL:0000094;2.89e-07;8|ontology_enrichment_celltype_v019_2=CL:0000766,1.91e-20,72;CL:0000839,1.09e-17,66;CL:0000860,7.06e-16,42;CL:0002057,7.06e-16,42;CL:0000473,1.26e-14,48;CL:0000234,1.26e-14,48;CL:0000557,1.91e-14,67;CL:0002194,4.81e-13,59;CL:0000576,4.81e-13,59;CL:0000040,4.81e-13,59;CL:0000559,4.81e-13,59;CL:0000763,9.08e-13,108;CL:0000049,9.08e-13,108;CL:0002009,2.03e-12,61;CL:0000775,5.34e-08,3;CL:0000738,1.32e-07,136;CL:0000094,2.22e-07,8|ontology_enrichment_development_v019=CL:0002057;2.91e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.67e-21!115;UBERON:0000468!1.13e-15!659;UBERON:0000922!7.26e-12!612;UBERON:0002050!2.99e-11!605;UBERON:0005423!2.99e-11!605;UBERON:0000480!3.60e-11!626;UBERON:0000923!4.04e-11!604;UBERON:0005291!4.04e-11!604;UBERON:0006598!4.04e-11!604;UBERON:0002532!4.04e-11!604;UBERON:0000467!4.83e-11!625;UBERON:0002390!3.03e-10!102;UBERON:0003061!3.03e-10!102;UBERON:0002193!4.72e-10!112;UBERON:0000062!5.32e-09!511;UBERON:0001049!1.28e-08!57;UBERON:0005068!1.28e-08!57;UBERON:0006241!1.28e-08!57;UBERON:0007135!1.28e-08!57;UBERON:0000073!1.69e-08!94;UBERON:0001016!1.69e-08!94;UBERON:0004765!4.23e-08!101;UBERON:0001434!4.23e-08!101;UBERON:0002616!4.94e-08!59;UBERON:0002371!5.76e-08!80;UBERON:0001474!7.82e-08!86;UBERON:0001017!4.11e-07!82;UBERON:0005743!4.95e-07!86;UBERON:0003075!7.73e-07!86;UBERON:0007284!7.73e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-13;15!UBERON:0000179;1.40e-13;15!UBERON:0000463;1.40e-13;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-20,98;UBERON:0003061,3.12e-20,98;UBERON:0002193,2.17e-17,108;UBERON:0000178,1.05e-13,15;UBERON:0000179,1.05e-13,15;UBERON:0000463,1.05e-13,15;UBERON:0002371,6.47e-12,76;UBERON:0001474,1.50e-10,82;UBERON:0002405,1.96e-09,93;UBERON:0007023,2.05e-09,114;UBERON:0003081,2.88e-09,203;UBERON:0004765,4.98e-09,90;UBERON:0001434,3.11e-08,100|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,0,0,0,0,0,0.783556884599516,0,0,0.873765488520689,0,0.247532705920093,0.662794751455832,0,1.80808358407193,0,0.975865597581014,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0.547497700291537,0.502170558379211,0,0.0821005894499457,0,0.786728553697808,0,0.464448369948228,0,0,0,0,0,0.293600439334847,1.66198622559563,2.60707781711184,1.95309783644267,1.56740831967947,0.647787332037959,1.54545340580512,0.581592955118259,0,0.485168122375632,1.85943229524548,2.05583944010913,1.85823822537062,0.863077176966451,1.0246428261164,0.709446689665756,3.44745680736619,1.93645405075148,1.35426486594342,2.63539275359647,1.36453075028923,0.674170453335254,2.44867113896722,0.641858054152187,3.19668562899521,0.989553900560148,0.598390972864896,0.426224750532694,4.35313857942876,2.8369261234557,4.9825779919646,0.251248665256743,0.521482918420201,0.868755378820466,3.02699751316684,2.20966581592539,1.58231193720442,0.633765858935825,0,0.419317291016752,0.673971786878971,0.450530678524519,0.32145117339416,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0,0.443458794925128,0.087834785693126,0.458426764241994,0.364295288292542,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0.949265659568129,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.506522046658319,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0.326923806226917,0.302714855289863,0,0.468642863667593,0.936480230490962,0,0.298897361103602,0.704606991862589,0.809364721840658,0.842704840213491,0.408308342509787,0,0.413303124703062,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0.375355559615893,0.831192346452549,0,0.30648779579902,1.20190447125277,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.3091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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3821 | |||
|TSSclassifier=S | |||
|UniProt=O43524 | |||
|association_with_transcript=7bp_to_ENST00000406360,NM_001455,uc003psm.2_5end | |||
|description=CAGE_peak_6_at_FOXO3_5end | |||
|id=chr6:108882076..108882087,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.82e-14!42;CL:0000766!1.00e-12!76;CL:0000860!2.37e-12!45;CL:0000839!3.23e-11!70;CL:0000557!2.36e-10!71;CL:0002009!1.13e-09!65;CL:0002194!3.77e-09!63;CL:0000576!3.77e-09!63;CL:0000040!3.77e-09!63;CL:0000559!3.77e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.29e-14;33!CL:0002057;5.29e-14;33!CL:0000766;2.44e-11;69!CL:0000473;3.34e-11;39!CL:0000234;3.34e-11;39!CL:0000576;3.06e-10;48!CL:0000775;7.08e-08;3!CL:0000094;2.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.91e-20,72;CL:0000839,1.09e-17,66;CL:0000860,7.06e-16,42;CL:0002057,7.06e-16,42;CL:0000473,1.26e-14,48;CL:0000234,1.26e-14,48;CL:0000557,1.91e-14,67;CL:0002194,4.81e-13,59;CL:0000576,4.81e-13,59;CL:0000040,4.81e-13,59;CL:0000559,4.81e-13,59;CL:0000763,9.08e-13,108;CL:0000049,9.08e-13,108;CL:0002009,2.03e-12,61;CL:0000775,5.34e-08,3;CL:0000738,1.32e-07,136;CL:0000094,2.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.91e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-13;15!UBERON:0000179;1.40e-13;15!UBERON:0000463;1.40e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-20,98;UBERON:0003061,3.12e-20,98;UBERON:0002193,2.17e-17,108;UBERON:0000178,1.05e-13,15;UBERON:0000179,1.05e-13,15;UBERON:0000463,1.05e-13,15;UBERON:0002371,6.47e-12,76;UBERON:0001474,1.50e-10,82;UBERON:0002405,1.96e-09,93;UBERON:0007023,2.05e-09,114;UBERON:0003081,2.88e-09,203;UBERON:0004765,4.98e-09,90;UBERON:0001434,3.11e-08,100 | |||
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| |||
|short_description=p6@FOXO3 | |||
}} |
Revision as of 17:17, 13 September 2013
Short description: | p6@FOXO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_FOXO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000406360, NM_001455, uc003psm.2_5end |
EntrezGene: | FOXO3 |
HGNC: | 3821 |
UniProt: | O43524 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.91e-20 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-17 | 66 |
classical monocyte | 7.06e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.06e-16 | 42 |
defensive cell | 1.26e-14 | 48 |
phagocyte | 1.26e-14 | 48 |
granulocyte monocyte progenitor cell | 1.91e-14 | 67 |
monopoietic cell | 4.81e-13 | 59 |
monocyte | 4.81e-13 | 59 |
monoblast | 4.81e-13 | 59 |
promonocyte | 4.81e-13 | 59 |
myeloid cell | 9.08e-13 | 108 |
common myeloid progenitor | 9.08e-13 | 108 |
macrophage dendritic cell progenitor | 2.03e-12 | 61 |
neutrophil | 5.34e-08 | 3 |
leukocyte | 1.32e-07 | 136 |
granulocyte | 2.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.12e-20 | 98 |
blood island | 3.12e-20 | 98 |
hemolymphoid system | 2.17e-17 | 108 |
blood | 1.05e-13 | 15 |
haemolymphatic fluid | 1.05e-13 | 15 |
organism substance | 1.05e-13 | 15 |
bone marrow | 6.47e-12 | 76 |
bone element | 1.50e-10 | 82 |
immune system | 1.96e-09 | 93 |
adult organism | 2.05e-09 | 114 |
lateral plate mesoderm | 2.88e-09 | 203 |
skeletal element | 4.98e-09 | 90 |
skeletal system | 3.11e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.