FFCP PHASE1:Hg19::chr5:92919194..92919204,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7025|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7975|TSSclassifier=S|UniProt=P10589|association_with_transcript=151bp_to_ENST00000327111,NM_005654,uc003kkj.2_5end|description=CAGE_peak_16_at_NR2F1_5end|id=chr5:92919194..92919204,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002195;5.26e-10;2!CL:0002571;5.26e-10;2!CL:0002367;3.44e-09;2|ontology_enrichment_celltype_v019_2=CL:0002195,5.29e-10,2;CL:0002571,5.29e-10,2;CL:0002367,5.99e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!6.57e-29!86;UBERON:0007284!6.57e-29!86;UBERON:0002346!1.02e-27!90;UBERON:0002616!1.50e-27!59;UBERON:0005743!5.10e-27!86;UBERON:0001049!2.17e-26!57;UBERON:0005068!2.17e-26!57;UBERON:0006241!2.17e-26!57;UBERON:0007135!2.17e-26!57;UBERON:0001017!1.07e-25!82;UBERON:0000073!3.24e-24!94;UBERON:0001016!3.24e-24!94;UBERON:0000955!3.62e-24!69;UBERON:0006238!3.62e-24!69;UBERON:0003056!2.68e-20!61;UBERON:0002020!5.01e-18!34;UBERON:0003528!5.01e-18!34;UBERON:0001893!7.08e-18!34;UBERON:0002791!2.48e-17!33;UBERON:0001869!1.03e-16!32;UBERON:0000033!1.24e-16!123;UBERON:0003080!1.48e-16!42;UBERON:0000119!4.23e-16!312;UBERON:0002780!8.36e-16!41;UBERON:0001890!8.36e-16!41;UBERON:0006240!8.36e-16!41;UBERON:0000483!5.60e-15!309;UBERON:0000153!5.90e-15!129;UBERON:0007811!5.90e-15!129;UBERON:0000025!1.17e-14!194;UBERON:0000956!7.46e-14!25;UBERON:0000203!7.46e-14!25;UBERON:0004121!1.50e-13!169;UBERON:0000475!1.56e-13!365;UBERON:0000477!2.56e-13!286;UBERON:0000924!2.81e-13!173;UBERON:0006601!2.81e-13!173;UBERON:0004111!7.94e-13!241;UBERON:0002619!6.91e-12!22;UBERON:0003076!1.58e-11!15;UBERON:0003057!1.58e-11!15;UBERON:0000064!2.18e-11!219;UBERON:0002200!2.96e-11!11;UBERON:0006876!2.96e-11!11;UBERON:0007023!7.63e-11!115;UBERON:0001950!2.31e-10!20;UBERON:0000062!1.64e-09!511;UBERON:0004733!5.13e-09!12;UBERON:0002028!5.13e-09!12;UBERON:0007277!5.13e-09!12;UBERON:0000481!5.26e-09!347;UBERON:0004732!4.46e-08!13;UBERON:0002203!1.00e-07!6;UBERON:0001768!1.00e-07!6;UBERON:0000468!2.21e-07!659;UBERON:0000063!3.15e-07!97;UBERON:0000922!3.38e-07!612;UBERON:0002298!5.19e-07!8;UBERON:0002050!5.33e-07!605;UBERON:0005423!5.33e-07!605|ontology_enrichment_uberon_v019=UBERON:0002203;8.34e-17;6!UBERON:0001768;8.34e-17;6!UBERON:0002200;8.34e-17;6!UBERON:0001801;7.82e-10;14!UBERON:0000488;1.11e-09;4!UBERON:0005969;3.44e-09;2!UBERON:0003956;3.44e-09;2!UBERON:0006876;4.85e-09;11!UBERON:0000019;4.44e-07;19!UBERON:0000047;4.44e-07;19!UBERON:0004088;4.44e-07;19!UBERON:0010230;4.44e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0002203,1.28e-16,6;UBERON:0001768,1.28e-16,6;UBERON:0002200,1.28e-16,6;UBERON:0003075,6.30e-10,82;UBERON:0007284,6.30e-10,82;UBERON:0000488,1.08e-09,4;UBERON:0001801,1.10e-09,14;UBERON:0002346,2.68e-09,86;UBERON:0005969,5.99e-09,2;UBERON:0003956,5.99e-09,2;UBERON:0006876,6.06e-09,11;UBERON:0010371,4.40e-07,104;UBERON:0003056,7.67e-07,61|phase1_expression=0.726713517082227,0.856402095563933,1.55049844505568,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,1.84681587115182,0.816002764977012,1.25381888591235,1.14494394852423,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.04580098949649,0,0,0,0,0,1.41802225746102,0.886917589850256,1.49319135678314,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.605429710579726,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,2.73048408581408,0.718618141816238,0,0,0,0,0,0,0.567160915800105,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0.232387885739037,1.45125477021519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,1.47008711385542,0,0,0,0,0,2.23038153388083,0,0,0,0,0,0,0,1.15930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.531876233169741,0,0.514414748524284,1.41849132023278,0.266422179016099,4.00338382242813,2.17048642156577,0,0.325736184293735,4.26470338491055,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,1.50764638800914,3.82763250991898,0,0,0,0,0,0.813795071099207,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0.68888668898764,0,1.70461739447251,0,0.0770153371044148,0,0,0,0,0.170093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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7025 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7975 | |||
|TSSclassifier=S | |||
|UniProt=P10589 | |||
|association_with_transcript=151bp_to_ENST00000327111,NM_005654,uc003kkj.2_5end | |||
|description=CAGE_peak_16_at_NR2F1_5end | |||
|id=chr5:92919194..92919204,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002195;5.26e-10;2!CL:0002571;5.26e-10;2!CL:0002367;3.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,5.29e-10,2;CL:0002571,5.29e-10,2;CL:0002367,5.99e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!6.57e-29!86;UBERON:0007284!6.57e-29!86;UBERON:0002346!1.02e-27!90;UBERON:0002616!1.50e-27!59;UBERON:0005743!5.10e-27!86;UBERON:0001049!2.17e-26!57;UBERON:0005068!2.17e-26!57;UBERON:0006241!2.17e-26!57;UBERON:0007135!2.17e-26!57;UBERON:0001017!1.07e-25!82;UBERON:0000073!3.24e-24!94;UBERON:0001016!3.24e-24!94;UBERON:0000955!3.62e-24!69;UBERON:0006238!3.62e-24!69;UBERON:0003056!2.68e-20!61;UBERON:0002020!5.01e-18!34;UBERON:0003528!5.01e-18!34;UBERON:0001893!7.08e-18!34;UBERON:0002791!2.48e-17!33;UBERON:0001869!1.03e-16!32;UBERON:0000033!1.24e-16!123;UBERON:0003080!1.48e-16!42;UBERON:0000119!4.23e-16!312;UBERON:0002780!8.36e-16!41;UBERON:0001890!8.36e-16!41;UBERON:0006240!8.36e-16!41;UBERON:0000483!5.60e-15!309;UBERON:0000153!5.90e-15!129;UBERON:0007811!5.90e-15!129;UBERON:0000025!1.17e-14!194;UBERON:0000956!7.46e-14!25;UBERON:0000203!7.46e-14!25;UBERON:0004121!1.50e-13!169;UBERON:0000475!1.56e-13!365;UBERON:0000477!2.56e-13!286;UBERON:0000924!2.81e-13!173;UBERON:0006601!2.81e-13!173;UBERON:0004111!7.94e-13!241;UBERON:0002619!6.91e-12!22;UBERON:0003076!1.58e-11!15;UBERON:0003057!1.58e-11!15;UBERON:0000064!2.18e-11!219;UBERON:0002200!2.96e-11!11;UBERON:0006876!2.96e-11!11;UBERON:0007023!7.63e-11!115;UBERON:0001950!2.31e-10!20;UBERON:0000062!1.64e-09!511;UBERON:0004733!5.13e-09!12;UBERON:0002028!5.13e-09!12;UBERON:0007277!5.13e-09!12;UBERON:0000481!5.26e-09!347;UBERON:0004732!4.46e-08!13;UBERON:0002203!1.00e-07!6;UBERON:0001768!1.00e-07!6;UBERON:0000468!2.21e-07!659;UBERON:0000063!3.15e-07!97;UBERON:0000922!3.38e-07!612;UBERON:0002298!5.19e-07!8;UBERON:0002050!5.33e-07!605;UBERON:0005423!5.33e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002203;8.34e-17;6!UBERON:0001768;8.34e-17;6!UBERON:0002200;8.34e-17;6!UBERON:0001801;7.82e-10;14!UBERON:0000488;1.11e-09;4!UBERON:0005969;3.44e-09;2!UBERON:0003956;3.44e-09;2!UBERON:0006876;4.85e-09;11!UBERON:0000019;4.44e-07;19!UBERON:0000047;4.44e-07;19!UBERON:0004088;4.44e-07;19!UBERON:0010230;4.44e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002203,1.28e-16,6;UBERON:0001768,1.28e-16,6;UBERON:0002200,1.28e-16,6;UBERON:0003075,6.30e-10,82;UBERON:0007284,6.30e-10,82;UBERON:0000488,1.08e-09,4;UBERON:0001801,1.10e-09,14;UBERON:0002346,2.68e-09,86;UBERON:0005969,5.99e-09,2;UBERON:0003956,5.99e-09,2;UBERON:0006876,6.06e-09,11;UBERON:0010371,4.40e-07,104;UBERON:0003056,7.67e-07,61 | |||
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| |||
|short_description=p16@NR2F1 | |||
}} |
Revision as of 16:54, 13 September 2013
Short description: | p16@NR2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_NR2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 151bp_to_ENST00000327111, NM_005654, uc003kkj.2_5end |
EntrezGene: | NR2F1 |
HGNC: | 7975 |
UniProt: | P10589 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 5.29e-10 | 2 |
hepatic mesenchymal stem cell | 5.29e-10 | 2 |
trabecular meshwork cell | 5.99e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
vasculature of eye | 1.28e-16 | 6 |
uvea | 1.28e-16 | 6 |
vasculature of head | 1.28e-16 | 6 |
neural plate | 6.30e-10 | 82 |
presumptive neural plate | 6.30e-10 | 82 |
atypical epithelium | 1.08e-09 | 4 |
anterior segment of eyeball | 1.10e-09 | 14 |
neurectoderm | 2.68e-09 | 86 |
reticulum trabeculare | 5.99e-09 | 2 |
aqueous drainage system | 5.99e-09 | 2 |
vasculature of organ | 6.06e-09 | 11 |
ecto-epithelium | 4.40e-07 | 104 |
pre-chordal neural plate | 7.67e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.