FFCP PHASE1:Mm9::chr18:74029632..74029644,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=70|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:74029632..74029644,+|id=chr18:74029632..74029644,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!5.70e-16!17;UBERON:0009196!5.70e-16!17;UBERON:0009117!5.70e-16!17;UBERON:0000991!7.13e-15!18;UBERON:0005564!7.13e-15!18;UBERON:0000473!1.32e-14!14;UBERON:0003135!2.00e-13!15;UBERON:0003101!2.15e-12!16;UBERON:0000079!2.15e-12!16;UBERON:0003133!3.08e-10!24;UBERON:0005156!3.54e-09!26;UBERON:0000990!3.54e-09!26|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-31,14;UBERON:0003135,1.68e-29,15;UBERON:0003101,1.04e-27,16;UBERON:0000079,1.04e-27,16;UBERON:0004176,3.95e-26,17;UBERON:0009196,3.95e-26,17;UBERON:0009117,3.95e-26,17;UBERON:0000991,1.01e-24,18;UBERON:0005564,1.01e-24,18;UBERON:0003133,9.72e-19,24;UBERON:0005156,2.36e-17,26;UBERON:0000990,2.36e-17,26;UBERON:0002323,2.12e-12,37;UBERON:0004458,2.12e-12,37;UBERON:0003886,4.33e-12,38;UBERON:0002553,8.52e-12,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0.628340120440365,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,2.81846469342095,0.897099276263873,0.496375471371293,0.777804753376191,0.645799117388655,0.506868376472335,1.40828686374905,1.43224823328345,6.08184197669123,1.44950472495604,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr18:74029632..74029644,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:74029632..74029644,+ | |||
|id=chr18:74029632..74029644,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!5.70e-16!17;UBERON:0009196!5.70e-16!17;UBERON:0009117!5.70e-16!17;UBERON:0000991!7.13e-15!18;UBERON:0005564!7.13e-15!18;UBERON:0000473!1.32e-14!14;UBERON:0003135!2.00e-13!15;UBERON:0003101!2.15e-12!16;UBERON:0000079!2.15e-12!16;UBERON:0003133!3.08e-10!24;UBERON:0005156!3.54e-09!26;UBERON:0000990!3.54e-09!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-31,14;UBERON:0003135,1.68e-29,15;UBERON:0003101,1.04e-27,16;UBERON:0000079,1.04e-27,16;UBERON:0004176,3.95e-26,17;UBERON:0009196,3.95e-26,17;UBERON:0009117,3.95e-26,17;UBERON:0000991,1.01e-24,18;UBERON:0005564,1.01e-24,18;UBERON:0003133,9.72e-19,24;UBERON:0005156,2.36e-17,26;UBERON:0000990,2.36e-17,26;UBERON:0002323,2.12e-12,37;UBERON:0004458,2.12e-12,37;UBERON:0003886,4.33e-12,38;UBERON:0002553,8.52e-12,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0,0.628340120440365,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,2.81846469342095,0.897099276263873,0.496375471371293,0.777804753376191,0.645799117388655,0.506868376472335,1.40828686374905,1.43224823328345,6.08184197669123,1.44950472495604,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:74029632..74029644,+ | |||
}} |
Revision as of 16:43, 13 September 2013
Short description: | p@chr18:74029632..74029644, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:74029632..74029644, + |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-31 | 14 |
male reproductive organ | 1.68e-29 | 15 |
male organism | 1.04e-27 | 16 |
male reproductive system | 1.04e-27 | 16 |
external genitalia | 3.95e-26 | 17 |
indifferent external genitalia | 3.95e-26 | 17 |
indifferent gonad | 3.95e-26 | 17 |
gonad | 1.01e-24 | 18 |
gonad primordium | 1.01e-24 | 18 |
reproductive organ | 9.72e-19 | 24 |
reproductive structure | 2.36e-17 | 26 |
reproductive system | 2.36e-17 | 26 |
body cavity | 2.12e-12 | 37 |
body cavity or lining | 2.12e-12 | 37 |
body cavity precursor | 4.33e-12 | 38 |
anatomical cavity | 8.52e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.