FFCP PHASE1:Mm9::chr18:65858142..65858165,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:65858142..65858165,-|id=chr18:65858142..65858165,-|ontology_enrichment_celltype=CL:0000988!4.84e-08!32;CL:0002032!4.84e-08!32;CL:0000037!4.84e-08!32;CL:0000566!4.84e-08!32;CL:0000837!4.84e-08!32|ontology_enrichment_celltype_v019_2=CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000625,1.05e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.80772652818207,0,0,0,0,0.513602189793617,0.34968160967599,0,0,0.699561878128147,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,5.88231488031014,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,4.92769630792852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,3.23500836165985,1.79970819298022,1.27070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0.43839146485515,0,0,0.205782136407943,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,3.73952545986482,8.95689294871411,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:65858142..65858165,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:65858142..65858165,- | |||
|id=chr18:65858142..65858165,- | |||
|ontology_enrichment_celltype=CL:0000988!4.84e-08!32;CL:0002032!4.84e-08!32;CL:0000037!4.84e-08!32;CL:0000566!4.84e-08!32;CL:0000837!4.84e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000625,1.05e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.80772652818207,0,0,0,0,0.513602189793617,0.34968160967599,0,0,0.699561878128147,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0,5.88231488031014,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,4.92769630792852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,3.23500836165985,1.79970819298022,1.27070227073065,0,0,0,0.347648640384553,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0.43839146485515,0,0,0.205782136407943,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,3.73952545986482,8.95689294871411,2.62579950228405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:65858142..65858165,- | |||
}} |
Revision as of 16:36, 13 September 2013
Short description: | p@chr18:65858142..65858165, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:65858142..65858165, - |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.16e-08 | 1 |
meso-epithelial cell | 2.16e-08 | 1 |
endothelial cell | 2.16e-08 | 1 |
endothelial cell of sinusoid | 2.16e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.16e-08 | 1 |
regulatory T cell | 4.10e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.10e-08 | 1 |
CD8-positive, alpha-beta T cell | 1.05e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.16e-08 | 1 |
hepatic sinusoid | 2.16e-08 | 1 |
parenchyma | 2.16e-08 | 1 |
abdomen blood vessel | 2.16e-08 | 1 |
sinusoid | 2.16e-08 | 1 |
digestive system duct | 2.16e-08 | 1 |
abdominal segment blood vessel | 2.16e-08 | 1 |
trunk blood vessel | 2.16e-08 | 1 |
liver parenchyma | 2.16e-08 | 1 |
liver lobule | 2.16e-08 | 1 |
biliary system | 2.16e-08 | 1 |
biliary tree | 2.16e-08 | 1 |
biliary bud | 2.16e-08 | 1 |
hepatic duct | 2.16e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.