FFCP PHASE1:Hg19::chr5:78908233..78908316,+: Difference between revisions
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{{FFCP | 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3.7570669244403,21.121688945596,39.1254723257451,34.2558400253961,32.4666831183477,25.2900849135716,11.3038402316444,25.6718260965423,34.355856547542,35.5075751361672,27.0846297543377,29.6850124068039,46.2701835230199,28.8338486180124,32.9683413803861,19.5850872734303,17.7426179987561,20.0713926626265,40.4822800947244,25.7736508414591,27.3706097174965,25.2549628830095,45.9135654394326,28.9997185364632,25.5139492153093,24.8191147254844,29.8231801092197,25.3488914620273,32.9463969513731,31.8476710958893,22.0015270564734,34.3395705182793,31.3177024552305,12.6184898228651,50.4663955667135,16.7264441272442,24.7944577366951,27.431416986985,13.4283035107824,27.4105109047244,21.8488386119415,6.79363183754139,22.3669730570281,24.2064129945857,17.1693494061114,29.2270422329816,21.5242875613875,18.9986687952159,17.3200175021108,39.6801711755467,32.9313921938567,33.6148045992809,40.5642177754494,44.2273295942657,20.8906972440661,28.1045124066974,29.9981093782395,41.6097745807149,51.3200639389231,13.0528669320372,18.2264890749322,46.3001170551361,40.4350219021432,20.5909937798879,19.0849916172127,20.1300405575547,31.015537246532,14.9364626359542,35.9251614971844,29.2488403651245,12.2901881954114,36.8885046757966,43.8471302206969,10.4074197277111,30.6828071010895,32.4620205994392,41.2993917370235,56.678630530234,42.6222403682594,65.4321201928009,36.5503959521491,35.546827766608,46.1820346507094,68.5293217243941,30.3276450168169,30.0822794536738,36.1354339087708,39.625303489566,22.88292572803,12.4264786690818,34.014673981883,52.2711782027338,24.6080183818294,29.6975324268575,23.3096958088466,30.9528924094083,34.1547559161375,41.2654642018391,49.2079202126724,42.7841668757451,35.8933485697513,62.355128228077,32.3472082445737,50.1173290173187,55.2235707289209,30.9185074887821,59.9986056183681,49.4337071661671,57.66173240248,58.0538587945809,50.3829462523789,34.2244943040664,38.5848021234192,42.4810831105198,39.4636641377095,26.7118080397768,16.12855327435,48.2732521030661,49.6485264134566,33.3523874343409,51.1368883485318,36.7076905071656,65.4519812405259,58.9681489457415,20.8577967487199,11.15917683534,13.213228694996,28.0598977655589,42.6865298175856,58.7271561203188,25.5766074871214,42.1622811643872,50.1727683097597,51.8097500935679,64.3548316290212,34.3660302816075,27.9185747097888,24.8440124134133,24.4963395637165,27.9728165803442,35.1123623948936,29.7817265106432,26.589666975768,27.8355463521168,63.1424290976881,17.77939922312,16.3139635632322,22.0002167938502,25.8646527869218,26.8254860858847,18.2665040715675,54.0219106755613,37.5922444066807,21.1642783362685,49.7651093160428,17.6757410326219,71.84889896407,55.8447232614922,70.1608507788444,20.0513995331624,42.8566665988132,46.345221453002,28.18340597083,42.4958373881465,37.4068564018633,38.1146491773549,40.1685013535584,34.8634255387451,45.725327025313,11.5173240401025,33.3158301935482,38.8352114402936,46.0253351248398,37.9434918530086,35.5875234046192,31.5817390350366,19.5557958494372,8.41344904120456,17.4843931395783,12.7486037177477,22.7134794475726,30.5091066455685,12.2846694253264,41.2993905289405,55.7365390724851,60.5293690804909,52.5439618978428,57.7864090951658,52.1361104905591,39.0762904507837,45.004167864497,51.6927886496628,42.834537521205,54.5716410187192,43.7610663272892,30.1165304955047,51.1202082380719,40.1644350198988,60.8768452479204,24.0139642402375,29.4567474622495,5.7921684686082,30.8998695246659,44.5817790566563,80.4348702723261,37.8413445833637,41.2769199995018,44.8840559707988,25.9660478765619|short_description=p1@PAPD4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=167153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26776 | |||
|TSSclassifier=S | |||
|UniProt=Q6PIY7,D6RAF2 | |||
|association_with_transcript=0bp_to_ENST00000423041,ENST00000428308,ENST00000453514,ENST00000504233,NM_001114393,NM_001114394,NM_173797,uc003kfz.2,uc003kga.2,uc003kgb.2,uc010jae.1,uc010jaf.1_5end | |||
|description=CAGE_peak_1_at_PAPD4_5end | |||
|id=chr5:78908233..78908316,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.58e-31!140;CL:0000766!3.57e-30!76;CL:0002031!1.46e-28!124;CL:0000839!3.94e-27!70;CL:0002087!5.25e-26!119;CL:0000557!5.98e-26!71;CL:0002009!1.07e-24!65;CL:0002194!2.99e-24!63;CL:0000576!2.99e-24!63;CL:0000040!2.99e-24!63;CL:0000559!2.99e-24!63;CL:0002057!1.16e-23!42;CL:0000037!6.93e-23!172;CL:0000566!6.93e-23!172;CL:0002032!1.25e-22!165;CL:0000837!1.25e-22!165;CL:0000860!9.94e-21!45;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0000988!4.06e-19!182;CL:0000791!2.92e-07!18;CL:0000789!2.92e-07!18;CL:0002420!2.92e-07!18;CL:0002419!2.92e-07!18;CL:0000790!2.92e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.64e-19;33!CL:0002057;8.64e-19;33!CL:0000473;1.89e-17;39!CL:0000234;1.89e-17;39!CL:0000576;6.72e-17;48!CL:0000766;8.79e-15;69!CL:0002087;4.42e-09;104!CL:0000738;1.61e-07;136!CL:0000791;2.86e-07;18!CL:0000789;2.86e-07;18!CL:0002419;2.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.24e-33,136;CL:0000766,3.75e-33,72;CL:0002031,1.65e-30,120;CL:0000839,4.61e-30,66;CL:0000557,9.48e-29,67;CL:0002087,6.96e-28,115;CL:0002009,1.37e-27,61;CL:0002194,3.55e-27,59;CL:0000576,3.55e-27,59;CL:0000040,3.55e-27,59;CL:0000559,3.55e-27,59;CL:0000473,1.51e-25,48;CL:0000234,1.51e-25,48;CL:0000037,3.36e-24,168;CL:0002032,5.67e-24,161;CL:0000837,5.67e-24,161;CL:0000860,1.16e-23,42;CL:0002057,1.16e-23,42;CL:0000763,6.49e-21,108;CL:0000049,6.49e-21,108;CL:0000988,8.40e-21,177;CL:0000791,2.92e-07,18;CL:0000789,2.92e-07,18;CL:0002420,2.92e-07,18;CL:0002419,2.92e-07,18;CL:0000790,2.92e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-17;42!CL:0000790;2.86e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@PAPD4 | |||
}} |
Revision as of 16:35, 13 September 2013
Short description: | p1@PAPD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAPD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423041, ENST00000428308, ENST00000453514, ENST00000504233, NM_001114393, NM_001114394, NM_173797, uc003kfz.2, uc003kga.2, uc003kgb.2, uc010jae.1, uc010jaf.1_5end |
EntrezGene: | PAPD4 |
HGNC: | 26776 |
UniProt: | Q6PIY7D6RAF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.24e-33 | 136 |
myeloid leukocyte | 3.75e-33 | 72 |
hematopoietic lineage restricted progenitor cell | 1.65e-30 | 120 |
myeloid lineage restricted progenitor cell | 4.61e-30 | 66 |
granulocyte monocyte progenitor cell | 9.48e-29 | 67 |
nongranular leukocyte | 6.96e-28 | 115 |
macrophage dendritic cell progenitor | 1.37e-27 | 61 |
monopoietic cell | 3.55e-27 | 59 |
monocyte | 3.55e-27 | 59 |
monoblast | 3.55e-27 | 59 |
promonocyte | 3.55e-27 | 59 |
defensive cell | 1.51e-25 | 48 |
phagocyte | 1.51e-25 | 48 |
hematopoietic stem cell | 3.36e-24 | 168 |
hematopoietic oligopotent progenitor cell | 5.67e-24 | 161 |
hematopoietic multipotent progenitor cell | 5.67e-24 | 161 |
classical monocyte | 1.16e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-23 | 42 |
myeloid cell | 6.49e-21 | 108 |
common myeloid progenitor | 6.49e-21 | 108 |
hematopoietic cell | 8.40e-21 | 177 |
mature alpha-beta T cell | 2.92e-07 | 18 |
alpha-beta T cell | 2.92e-07 | 18 |
immature T cell | 2.92e-07 | 18 |
mature T cell | 2.92e-07 | 18 |
immature alpha-beta T cell | 2.92e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.11e-29 | 98 |
blood island | 2.11e-29 | 98 |
adult organism | 3.53e-25 | 114 |
hemolymphoid system | 3.72e-24 | 108 |
bone marrow | 5.18e-23 | 76 |
bone element | 5.29e-20 | 82 |
immune system | 1.13e-18 | 93 |
skeletal element | 1.28e-16 | 90 |
skeletal system | 2.50e-15 | 100 |
neural tube | 2.58e-08 | 56 |
neural rod | 2.58e-08 | 56 |
future spinal cord | 2.58e-08 | 56 |
neural keel | 2.58e-08 | 56 |
regional part of nervous system | 3.05e-07 | 53 |
regional part of brain | 3.05e-07 | 53 |
regional part of forebrain | 5.19e-07 | 41 |
forebrain | 5.19e-07 | 41 |
anterior neural tube | 5.19e-07 | 41 |
future forebrain | 5.19e-07 | 41 |
blood | 9.17e-07 | 15 |
haemolymphatic fluid | 9.17e-07 | 15 |
organism substance | 9.17e-07 | 15 |
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