FFCP PHASE1:Hg19::chr5:61699313..61699350,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51194|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20628|TSSclassifier=W|UniProt=D6RCN7|association_with_transcript=-448bp_to_ENST00000514647_5end|description=CAGE_peak_4_at_IPO11_5end|id=chr5:61699313..61699350,+|ontology_enrichment_celltype=CL:0000738!5.87e-19!140;CL:0002087!4.79e-18!119;CL:0002057!1.22e-17!42;CL:0002031!1.89e-17!124;CL:0000860!2.49e-16!45;CL:0000037!6.85e-16!172;CL:0000566!6.85e-16!172;CL:0000557!8.26e-16!71;CL:0002009!2.73e-15!65;CL:0002194!2.56e-14!63;CL:0000576!2.56e-14!63;CL:0000040!2.56e-14!63;CL:0000559!2.56e-14!63;CL:0000988!2.76e-14!182;CL:0002032!1.22e-13!165;CL:0000837!1.22e-13!165;CL:0000839!1.77e-13!70;CL:0000134!5.75e-13!358;CL:0000048!7.21e-13!430;CL:0000766!1.11e-12!76;CL:0000034!1.55e-12!444;CL:0000723!2.24e-12!436;CL:0002320!9.96e-12!365;CL:0000219!3.08e-10!390;CL:0000763!8.59e-10!112;CL:0000049!8.59e-10!112|ontology_enrichment_celltype_v019=CL:0000860;2.89e-17;33!CL:0002057;2.89e-17;33!CL:0000576;3.14e-12;48!CL:0000473;9.73e-12;39!CL:0000234;9.73e-12;39!CL:0000766;8.84e-11;69!CL:0000624;4.59e-09;6!CL:0002087;2.32e-08;104!CL:0000898;1.58e-07;3!CL:0000623;4.64e-07;3!CL:0000875;8.96e-07;3!CL:0002396;8.96e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,5.22e-26,42;CL:0002057,5.22e-26,42;CL:0000738,3.46e-23,136;CL:0002031,9.10e-22,120;CL:0000473,9.70e-22,48;CL:0000234,9.70e-22,48;CL:0000557,1.56e-21,67;CL:0002087,1.41e-20,115;CL:0002009,2.52e-19,61;CL:0000037,4.65e-19,168;CL:0000988,2.83e-18,177;CL:0000839,2.51e-17,66;CL:0002194,3.73e-17,59;CL:0000576,3.73e-17,59;CL:0000040,3.73e-17,59;CL:0000559,3.73e-17,59;CL:0000766,2.07e-16,72;CL:0002032,1.03e-15,161;CL:0000837,1.03e-15,161;CL:0000134,5.81e-12,354;CL:0000763,8.79e-12,108;CL:0000049,8.79e-12,108;CL:0002320,2.27e-11,361;CL:0000219,2.51e-10,386;CL:0002393,5.54e-10,9;CL:0002397,5.54e-10,9;CL:0000034,1.94e-09,441;CL:0000048,2.28e-09,427;CL:0000624,3.62e-09,6;CL:0000723,5.64e-09,433;CL:0000898,1.68e-07,3;CL:0000875,5.19e-07,3;CL:0002396,5.19e-07,3;CL:0000623,6.46e-07,3;CL:0000825,6.46e-07,3|ontology_enrichment_development_v019=CL:0002057;3.50e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.11e-14!80;UBERON:0001474!6.90e-13!86;UBERON:0002384!9.33e-12!375;UBERON:0002390!1.14e-11!102;UBERON:0003061!1.14e-11!102;UBERON:0002193!8.58e-11!112;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!1.14e-08!167;UBERON:0002405!3.88e-08!115;UBERON:0003081!5.81e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-20,76;UBERON:0001474,2.58e-18,82;UBERON:0002405,2.21e-17,93;UBERON:0002390,3.57e-17,98;UBERON:0003061,3.57e-17,98;UBERON:0004765,7.79e-16,90;UBERON:0002193,1.43e-15,108;UBERON:0001434,2.56e-14,100;UBERON:0002384,1.44e-10,371;UBERON:0003081,3.21e-09,203;UBERON:0002204,2.11e-07,167|phase1_expression=1.63510541343501,1.07050261945492,0.986680828671798,0,1.78784437770915,0,0,1.89515962028049,1.56711376919903,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0,0.672325146451775,0,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0.152826811495903,0.246301768349837,0.0787107813136792,1.18009283054671,0.383829398097213,0.928896739896456,0,0.30120591877825,0.739508020333575,0.46480320348181,0.426507697462265,1.17440175733939,1.66198622559563,1.60435557976113,0.217010870715852,0.447830948479849,0.971680998056939,0.257575567634187,0.581592955118259,1.13362783106643,0.485168122375632,0.464858073811369,2.46700732813095,2.16794459626573,1.1507695692886,2.0492856522328,2.60130452877444,1.37898272294647,2.5819387343353,1.35426486594342,0.941211697713023,0.818718450173537,0.674170453335254,0.612167784741805,1.60464513538047,1.27867425159808,0.329851300186716,1.19678194572979,2.13112375266347,1.16083695451434,1.13477044938228,3.73693349397345,0.502497330513487,1.5644487552606,1.73751075764093,0.605399502633369,1.47311054395026,1.26584954976354,0.845021145247767,1.27562579979026,1.46761051855863,0.336985893439485,0.901061357049038,0.64290234678832,1.99508920618874,2.18808344918999,2.19196984517561,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,3.98449078376614,0.587237189370939,2.29363936875137,1.32171328579026,1.12101712596307,0.790152254325231,0.983548850569165,1.57204305099666,6.99045096598331,0.501559486172034,2.28145586643513,6.15482147455153,3.89653456815823,1.00269411196656,3.24066498222321,2.43687284041983,2.16643091012012,1.0247305578054,1.69077151827842,0.822189523018381,1.93445012450094,0.869409257205157,3.26230438956533,1.07016331235885,7.31748666634838,0.566546713487831,7.66440987203842,5.15441168223945,2.78321661221453,0.95569624297229,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.473554504088034,0,2.21767417547206,2.40696176205157,3.91025890483557,4.87613732627923,2.01210257911091,0.12786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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51194 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20628 | |||
|TSSclassifier=W | |||
|UniProt=D6RCN7 | |||
|association_with_transcript=-448bp_to_ENST00000514647_5end | |||
|description=CAGE_peak_4_at_IPO11_5end | |||
|id=chr5:61699313..61699350,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.87e-19!140;CL:0002087!4.79e-18!119;CL:0002057!1.22e-17!42;CL:0002031!1.89e-17!124;CL:0000860!2.49e-16!45;CL:0000037!6.85e-16!172;CL:0000566!6.85e-16!172;CL:0000557!8.26e-16!71;CL:0002009!2.73e-15!65;CL:0002194!2.56e-14!63;CL:0000576!2.56e-14!63;CL:0000040!2.56e-14!63;CL:0000559!2.56e-14!63;CL:0000988!2.76e-14!182;CL:0002032!1.22e-13!165;CL:0000837!1.22e-13!165;CL:0000839!1.77e-13!70;CL:0000134!5.75e-13!358;CL:0000048!7.21e-13!430;CL:0000766!1.11e-12!76;CL:0000034!1.55e-12!444;CL:0000723!2.24e-12!436;CL:0002320!9.96e-12!365;CL:0000219!3.08e-10!390;CL:0000763!8.59e-10!112;CL:0000049!8.59e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-17;33!CL:0002057;2.89e-17;33!CL:0000576;3.14e-12;48!CL:0000473;9.73e-12;39!CL:0000234;9.73e-12;39!CL:0000766;8.84e-11;69!CL:0000624;4.59e-09;6!CL:0002087;2.32e-08;104!CL:0000898;1.58e-07;3!CL:0000623;4.64e-07;3!CL:0000875;8.96e-07;3!CL:0002396;8.96e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.50e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.11e-14!80;UBERON:0001474!6.90e-13!86;UBERON:0002384!9.33e-12!375;UBERON:0002390!1.14e-11!102;UBERON:0003061!1.14e-11!102;UBERON:0002193!8.58e-11!112;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!1.14e-08!167;UBERON:0002405!3.88e-08!115;UBERON:0003081!5.81e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p4@IPO11 | |||
}} |
Revision as of 16:05, 13 September 2013
Short description: | p4@IPO11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IPO11_5end |
Coexpression cluster: | NA |
Association with transcript: | -448bp_to_ENST00000514647_5end |
EntrezGene: | IPO11 |
HGNC: | 20628 |
UniProt: | D6RCN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.58e-20 | 76 |
bone element | 2.58e-18 | 82 |
immune system | 2.21e-17 | 93 |
hematopoietic system | 3.57e-17 | 98 |
blood island | 3.57e-17 | 98 |
skeletal element | 7.79e-16 | 90 |
hemolymphoid system | 1.43e-15 | 108 |
skeletal system | 2.56e-14 | 100 |
connective tissue | 1.44e-10 | 371 |
lateral plate mesoderm | 3.21e-09 | 203 |
musculoskeletal system | 2.11e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.