FFCP PHASE1:Hg19::chr5:56247935..56247959,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=166968|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26678|TSSclassifier=S|UniProt=Q7Z3K6|association_with_transcript=0bp_to_ENST00000381199,ENST00000381213,ENST00000381226,ENST00000452157,ENST00000480115,NM_152622,uc003jra.1,uc003jrb.1,uc003jrc.1,uc003jrd.1_5end|description=CAGE_peak_1_at_MIER3_5end|id=chr5:56247935..56247959,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.52e-13!94;UBERON:0001016!4.52e-13!94;UBERON:0001017!5.93e-13!82;UBERON:0005743!4.36e-12!86;UBERON:0007023!6.79e-12!115;UBERON:0001049!6.55e-11!57;UBERON:0005068!6.55e-11!57;UBERON:0006241!6.55e-11!57;UBERON:0007135!6.55e-11!57;UBERON:0003080!4.90e-10!42;UBERON:0000955!6.31e-10!69;UBERON:0006238!6.31e-10!69;UBERON:0002780!1.23e-09!41;UBERON:0001890!1.23e-09!41;UBERON:0006240!1.23e-09!41;UBERON:0002616!4.97e-09!59;UBERON:0001893!5.31e-07!34;UBERON:0002791!9.77e-07!33|ontology_enrichment_uberon_v019=UBERON:0002780;3.15e-07;41!UBERON:0001890;3.15e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-13,89;UBERON:0001017,1.50e-12,81;UBERON:0007023,6.15e-12,114;UBERON:0001049,1.68e-10,56;UBERON:0005068,1.68e-10,56;UBERON:0006241,1.68e-10,56;UBERON:0007135,1.68e-10,56;UBERON:0000073,8.89e-10,53;UBERON:0002616,8.89e-10,53;UBERON:0002780,1.22e-09,41;UBERON:0001890,1.22e-09,41;UBERON:0003080,1.22e-09,41;UBERON:0006240,1.22e-09,41;UBERON:0000955,1.51e-09,68;UBERON:0006238,1.51e-09,68;UBERON:0011216,4.07e-08,223;UBERON:0001893,5.29e-07,34|phase1_expression=3.27021082687002,2.35510576280081,4.51054093107108,4.00293193412522,2.23480547213644,8.72338524100369,0,0.631719873426831,1.30592814099919,0.491467873003018,0,1.74753097704138,0.263766978228454,4.57935505952172,1.65698687863958,5.3786011716142,3.61616716814386,0.730310090387373,2.92759679274304,1.84681587115182,0.816002764977012,1.88072832886853,12.0219114595044,5.88560027813402,3.76627918784408,3.132949635666,2.8735206307481,3.14843125254717,2.36018566109342,5.75744097145819,5.57338043937874,2.75826367343678,1.50602959389125,1.84877005083394,3.71842562785448,4.40724620711007,5.87200878669694,5.53995408531877,4.21143339687298,6.51032612147556,4.03047853631864,3.56283032620878,3.09090681161024,3.63495596948912,5.29026321164333,7.27752183563449,3.71886459049095,2.46700732813095,4.02618282163635,2.01384674625505,2.56160706529101,4.25668013799453,2.06847408441971,3.22742341791913,8.12558919566051,2.07066573496865,7.09555990150399,5.16864014223695,2.14258724659632,2.24650318953266,3.83602275479425,4.61791820261403,2.39356389145958,2.98357325372886,2.32167390902867,2.26954089876456,3.11411124497787,1.50749199154046,5.21482918420201,3.47502151528187,3.02699751316684,4.41933163185078,5.37986058649504,4.22510572623884,5.10250319916104,4.61249020118427,3.25753030324836,3.90459921387916,4.33959084082116,4.56020389985998,6.76316702476906,4.74926799788048,0,3.82297027883492,3.55803701545422,5.54749289336459,4.80475184443215,1.72425731986345,1.32208974556972,2.86216126360609,4.55370375287559,8.80855784056408,8.02773779062981,3.96513985737078,12.8916969485753,4.74091352595139,12.5894252872853,9.43225830597995,5.55124047298675,5.3499678525017,4.56291173287027,3.31413464014313,7.79306913631645,7.68732152507698,4.71369451959739,5.53834736459053,5.1452734115353,4.99556146930133,3.90178042679635,3.28875809207352,2.21080014228679,4.63684937176084,4.44859689486181,5.61835738988397,9.40819714244791,6.34532319106371,3.83220493601921,4.12352934579156,8.6026695286631,5.09704662918555,4.55758417699493,0.950452044448374,7.82990619204418,6.52731716887534,1.24930726552346,4.2619905367923,3.28451198768419,8.66908995866349,5.34880391567015,9.84805946403033,0,4.02420515822182,4.47518966452356,4.69870898099936,3.50936537445123,1.15877215168659,7.15757352345989,4.37971383272372,6.23929793282848,3.54767035940102,1.93236528524877,7.72776545436505,1.45718115317017,1.11235332835329,5.19275829847493,2.96020553408754,2.39324328933957,8.58566247499231,6.86393892936153,8.54352253057999,3.37896092523399,0.860234595106124,4.51282652089873,2.26123176769604,1.67799774483962,2.20094433552054,2.29894463190492,3.87625138753993,3.5576626268671,5.02080919147005,4.02829317109147,2.28081631715554,1.70843440283719,3.30896772311282,0.81014194788176,4.10778750106767,2.91888184414021,2.0270066486998,0,0.949265659568129,2.01521918323448,0,0,0,4.96971951695318,4.17880688493113,5.56118559415519,9.46560848471085,1.41867352879343,3.36406560085384,1.06748995729705,2.22000793575444,3.7345324247972,5.25371621071783,5.39424280274414,3.78393569112329,0.576175924479999,1.17160715916898,2.80944069147288,1.71141546463335,1.94283284717341,4.22764195117554,4.53244244230768,4.07307339436521,5.10385428137233,2.82518929817066,3.92637968467909,2.37600571456411,2.96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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=166968 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26678 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z3K6 | |||
|association_with_transcript=0bp_to_ENST00000381199,ENST00000381213,ENST00000381226,ENST00000452157,ENST00000480115,NM_152622,uc003jra.1,uc003jrb.1,uc003jrc.1,uc003jrd.1_5end | |||
|description=CAGE_peak_1_at_MIER3_5end | |||
|id=chr5:56247935..56247959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.52e-13!94;UBERON:0001016!4.52e-13!94;UBERON:0001017!5.93e-13!82;UBERON:0005743!4.36e-12!86;UBERON:0007023!6.79e-12!115;UBERON:0001049!6.55e-11!57;UBERON:0005068!6.55e-11!57;UBERON:0006241!6.55e-11!57;UBERON:0007135!6.55e-11!57;UBERON:0003080!4.90e-10!42;UBERON:0000955!6.31e-10!69;UBERON:0006238!6.31e-10!69;UBERON:0002780!1.23e-09!41;UBERON:0001890!1.23e-09!41;UBERON:0006240!1.23e-09!41;UBERON:0002616!4.97e-09!59;UBERON:0001893!5.31e-07!34;UBERON:0002791!9.77e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.15e-07;41!UBERON:0001890;3.15e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-13,89;UBERON:0001017,1.50e-12,81;UBERON:0007023,6.15e-12,114;UBERON:0001049,1.68e-10,56;UBERON:0005068,1.68e-10,56;UBERON:0006241,1.68e-10,56;UBERON:0007135,1.68e-10,56;UBERON:0000073,8.89e-10,53;UBERON:0002616,8.89e-10,53;UBERON:0002780,1.22e-09,41;UBERON:0001890,1.22e-09,41;UBERON:0003080,1.22e-09,41;UBERON:0006240,1.22e-09,41;UBERON:0000955,1.51e-09,68;UBERON:0006238,1.51e-09,68;UBERON:0011216,4.07e-08,223;UBERON:0001893,5.29e-07,34 | |||
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| |||
|short_description=p1@MIER3 | |||
}} |
Revision as of 15:56, 13 September 2013
Short description: | p1@MIER3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIER3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381199, ENST00000381213, ENST00000381226, ENST00000452157, ENST00000480115, NM_152622, uc003jra.1, uc003jrb.1, uc003jrc.1, uc003jrd.1_5end |
EntrezGene: | MIER3 |
HGNC: | 26678 |
UniProt: | Q7Z3K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-13 | 89 |
central nervous system | 1.50e-12 | 81 |
adult organism | 6.15e-12 | 114 |
neural tube | 1.68e-10 | 56 |
neural rod | 1.68e-10 | 56 |
future spinal cord | 1.68e-10 | 56 |
neural keel | 1.68e-10 | 56 |
regional part of nervous system | 8.89e-10 | 53 |
regional part of brain | 8.89e-10 | 53 |
regional part of forebrain | 1.22e-09 | 41 |
forebrain | 1.22e-09 | 41 |
anterior neural tube | 1.22e-09 | 41 |
future forebrain | 1.22e-09 | 41 |
brain | 1.51e-09 | 68 |
future brain | 1.51e-09 | 68 |
organ system subdivision | 4.07e-08 | 223 |
telencephalon | 5.29e-07 | 34 |
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