FFCP PHASE1:Mm9::chr18:31794423..31794465,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=480|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:31794423..31794465,-|id=chr18:31794423..31794465,-|ontology_enrichment_celltype=CL:0000144!2.84e-09!121;CL:0000012!2.84e-09!121;CL:0002371!6.61e-09!118;CL:0000548!1.21e-07!115;CL:0000004!1.21e-07!115;CL:0000255!1.21e-07!115;CL:0002563!1.62e-07!9;CL:0002251!1.62e-07!9;CL:0000063!3.13e-07!66;CL:0000034!4.42e-07!97|ontology_enrichment_celltype_v019_2=CL:0002563,2.34e-19,9;CL:0002251,2.34e-19,9;CL:0000239,5.08e-17,6;CL:0000677,5.08e-17,6;CL:0000584,5.08e-17,6;CL:0000791,9.11e-15,9;CL:0000789,9.11e-15,9;CL:0002420,9.11e-15,9;CL:0002419,9.11e-15,9;CL:0000790,9.11e-15,9;CL:0000075,1.71e-14,7;CL:0000066,6.95e-14,25;CL:0000838,7.00e-14,12;CL:0000542,1.03e-12,13;CL:0000051,1.03e-12,13;CL:0000624,1.35e-12,8;CL:0000084,6.73e-12,11;CL:0000827,6.73e-12,11;CL:0002031,1.63e-11,25;CL:0002076,4.45e-11,15;CL:0000223,3.34e-10,20;CL:0000738,2.06e-09,17;CL:0002087,2.06e-09,17;CL:0000764,4.92e-09,3;CL:0000765,4.92e-09,3;CL:0000038,4.92e-09,3;CL:0000547,4.92e-09,3;CL:0000988,1.61e-08,32;CL:0002032,1.61e-08,32;CL:0000037,1.61e-08,32;CL:0000837,1.61e-08,32;CL:0000682,1.91e-08,3;CL:0000893,8.54e-08,6;CL:0002489,8.54e-08,6;CL:0000898,8.54e-08,6;CL:0000809,8.54e-08,6;CL:0000810,8.54e-08,6;CL:0000895,8.54e-08,6;CL:0000808,8.54e-08,6;CL:0000894,8.54e-08,6;CL:0000806,8.54e-08,6;CL:0000807,8.54e-08,6;CL:0000805,8.54e-08,6;CL:0002425,8.54e-08,6;CL:0002436,8.54e-08,6;CL:0002427,8.54e-08,6;CL:0002428,8.54e-08,6;CL:0002429,8.54e-08,6;CL:0002433,8.54e-08,6;CL:0002431,8.54e-08,6;CL:0002432,8.54e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,2.96e-16,6;DOID:2531,4.92e-09,3;DOID:0060083,4.92e-09,3;DOID:1240,4.92e-09,3;DOID:0060100,7.62e-09,3;DOID:4045,7.62e-09,3|ontology_enrichment_uberon=UBERON:0001242!4.34e-08!13;UBERON:0000060!4.34e-08!13;UBERON:0001262!4.34e-08!13;UBERON:0004786!4.34e-08!13;UBERON:0000485!1.27e-07!11;UBERON:0003350!1.62e-07!9;UBERON:0004808!1.62e-07!9;UBERON:0001277!1.62e-07!9;UBERON:0000344!2.47e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.34e-19,9;UBERON:0004808,2.34e-19,9;UBERON:0001277,2.34e-19,9;UBERON:0000485,1.36e-15,11;UBERON:0001242,5.47e-13,13;UBERON:0001262,5.47e-13,13;UBERON:0004786,5.47e-13,13;UBERON:0000344,4.45e-11,15;UBERON:0000490,1.29e-07,66|phase1_expression=0.160148847104794,4.88565570695105,2.72999543633722,5.74682001482977,12.5223932486587,2.35030980676646,2.10251376535973,8.52213934714403,2.111830832275,3.97909694747389,0,0.398860794976682,3.42401459862411,5.42006494997784,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,1.27564935226605,0.496454756004426,0,0.319984845586813,0,2.29692785646008,2.58457197695445,1.29282739611533,0.190023419456374,0.252030129759931,0.665191531965914,1.90509202037889,2.46025915033828,15.8481681015439,2.02196133825892,0.498703936075477,4.69589519403449,4.18531630736908,1.5626706890476,3.66466620781659,7.64700934440319,5.46436387966757,1.94204141212461,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,2.01339127269284,3.62681071005672,2.01656279485478,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0,0.244981598429908,0.287536413054709,0.919218786610021,0,0.510749352340751,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.15279824777681,0,0,0.372798891650601,0.227178579999552,0.68014404096107,5.50742528533188,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0.762421362438388,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,1.55959071857676,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=480 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:31794423..31794465,- | |||
|id=chr18:31794423..31794465,- | |||
|ontology_enrichment_celltype=CL:0000144!2.84e-09!121;CL:0000012!2.84e-09!121;CL:0002371!6.61e-09!118;CL:0000548!1.21e-07!115;CL:0000004!1.21e-07!115;CL:0000255!1.21e-07!115;CL:0002563!1.62e-07!9;CL:0002251!1.62e-07!9;CL:0000063!3.13e-07!66;CL:0000034!4.42e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.34e-19,9;CL:0002251,2.34e-19,9;CL:0000239,5.08e-17,6;CL:0000677,5.08e-17,6;CL:0000584,5.08e-17,6;CL:0000791,9.11e-15,9;CL:0000789,9.11e-15,9;CL:0002420,9.11e-15,9;CL:0002419,9.11e-15,9;CL:0000790,9.11e-15,9;CL:0000075,1.71e-14,7;CL:0000066,6.95e-14,25;CL:0000838,7.00e-14,12;CL:0000542,1.03e-12,13;CL:0000051,1.03e-12,13;CL:0000624,1.35e-12,8;CL:0000084,6.73e-12,11;CL:0000827,6.73e-12,11;CL:0002031,1.63e-11,25;CL:0002076,4.45e-11,15;CL:0000223,3.34e-10,20;CL:0000738,2.06e-09,17;CL:0002087,2.06e-09,17;CL:0000764,4.92e-09,3;CL:0000765,4.92e-09,3;CL:0000038,4.92e-09,3;CL:0000547,4.92e-09,3;CL:0000988,1.61e-08,32;CL:0002032,1.61e-08,32;CL:0000037,1.61e-08,32;CL:0000837,1.61e-08,32;CL:0000682,1.91e-08,3;CL:0000893,8.54e-08,6;CL:0002489,8.54e-08,6;CL:0000898,8.54e-08,6;CL:0000809,8.54e-08,6;CL:0000810,8.54e-08,6;CL:0000895,8.54e-08,6;CL:0000808,8.54e-08,6;CL:0000894,8.54e-08,6;CL:0000806,8.54e-08,6;CL:0000807,8.54e-08,6;CL:0000805,8.54e-08,6;CL:0002425,8.54e-08,6;CL:0002436,8.54e-08,6;CL:0002427,8.54e-08,6;CL:0002428,8.54e-08,6;CL:0002429,8.54e-08,6;CL:0002433,8.54e-08,6;CL:0002431,8.54e-08,6;CL:0002432,8.54e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.96e-16,6;DOID:2531,4.92e-09,3;DOID:0060083,4.92e-09,3;DOID:1240,4.92e-09,3;DOID:0060100,7.62e-09,3;DOID:4045,7.62e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001242!4.34e-08!13;UBERON:0000060!4.34e-08!13;UBERON:0001262!4.34e-08!13;UBERON:0004786!4.34e-08!13;UBERON:0000485!1.27e-07!11;UBERON:0003350!1.62e-07!9;UBERON:0004808!1.62e-07!9;UBERON:0001277!1.62e-07!9;UBERON:0000344!2.47e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.34e-19,9;UBERON:0004808,2.34e-19,9;UBERON:0001277,2.34e-19,9;UBERON:0000485,1.36e-15,11;UBERON:0001242,5.47e-13,13;UBERON:0001262,5.47e-13,13;UBERON:0004786,5.47e-13,13;UBERON:0000344,4.45e-11,15;UBERON:0000490,1.29e-07,66 | |||
|phase1_expression=0.160148847104794,4.88565570695105,2.72999543633722,5.74682001482977,12.5223932486587,2.35030980676646,2.10251376535973,8.52213934714403,2.111830832275,3.97909694747389,0,0.398860794976682,3.42401459862411,5.42006494997784,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,1.27564935226605,0.496454756004426,0,0.319984845586813,0,2.29692785646008,2.58457197695445,1.29282739611533,0.190023419456374,0.252030129759931,0.665191531965914,1.90509202037889,2.46025915033828,15.8481681015439,2.02196133825892,0.498703936075477,4.69589519403449,4.18531630736908,1.5626706890476,3.66466620781659,7.64700934440319,5.46436387966757,1.94204141212461,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,2.01339127269284,3.62681071005672,2.01656279485478,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0,0.244981598429908,0.287536413054709,0.919218786610021,0,0.510749352340751,0.153606533256243,0,0.274462930807229,0,0,0.56276261003168,0.15279824777681,0,0,0.372798891650601,0.227178579999552,0.68014404096107,5.50742528533188,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0.762421362438388,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.500535317148282,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.94652465824877,0.780877488593277,0.430846795465598,0.955875191810208,1.55959071857676,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0.891844088010353,0,0.304464949114599,0,0.63549621259146,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0.559805809294632,0.414599921413271,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,1.69107881605257,0,0.330916980914195,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0.209718688851422,0.966336483304024,2.01621004380506,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0,0,0.443068581523732,0.100966449948148,0.381034033274999,0.302478555410522,0.194915761479505,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr18:31794423..31794465,- | |||
}} |
Revision as of 15:53, 13 September 2013
Short description: | p@chr18:31794423..31794465, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:31794423..31794465, - |
Coexpression cluster: | MCL_coexpression_mm9:480 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.34e-19 | 9 |
gastrointestinal system epithelium | 2.34e-19 | 9 |
intestinal epithelium | 2.34e-19 | 9 |
simple columnar epithelium | 1.36e-15 | 11 |
intestinal mucosa | 5.47e-13 | 13 |
wall of intestine | 5.47e-13 | 13 |
gastrointestinal system mucosa | 5.47e-13 | 13 |
mucosa | 4.45e-11 | 15 |
unilaminar epithelium | 1.29e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.96e-16 | 6 |
hematologic cancer | 4.92e-09 | 3 |
immune system cancer | 4.92e-09 | 3 |
leukemia | 4.92e-09 | 3 |
musculoskeletal system cancer | 7.62e-09 | 3 |
muscle cancer | 7.62e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.