FFCP PHASE1:Mm9::chr18:25912353..25912428,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=1|UniProt=Q7TSY6|association_with_transcript=55bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end|description=CAGE_peak_1_at_Celf4_5end|id=chr18:25912353..25912428,-|ontology_enrichment_celltype=CL:0000540!1.37e-17!33;CL:0000047!1.37e-17!33;CL:0000031!1.37e-17!33;CL:0000404!1.37e-17!33;CL:0000117!3.93e-15!23;CL:0000337!3.93e-15!23;CL:0000393!1.34e-12!39;CL:0000211!1.34e-12!39;CL:0002319!3.48e-12!43;CL:0000221!1.41e-11!44;CL:0000133!1.41e-11!44;CL:0000055!1.57e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.24e-22,33;CL:0000047,2.24e-22,33;CL:0000031,2.24e-22,33;CL:0000404,2.24e-22,33;CL:0000117,8.03e-20,23;CL:0000337,8.03e-20,23;CL:0000393,3.24e-17,39;CL:0000211,3.24e-17,39;CL:0002319,1.55e-15,43;CL:0000221,6.16e-15,44;CL:0000133,6.16e-15,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.11e-30!73;UBERON:0005743!1.11e-30!73;UBERON:0000073!1.12e-30!75;UBERON:0001016!1.12e-30!75;UBERON:0002346!3.74e-27!71;UBERON:0003075!3.74e-27!71;UBERON:0007284!3.74e-27!71;UBERON:0004121!9.70e-26!102;UBERON:0000924!9.70e-26!102;UBERON:0006601!9.70e-26!102;UBERON:0001049!2.33e-24!52;UBERON:0005068!2.33e-24!52;UBERON:0006241!2.33e-24!52;UBERON:0007135!2.33e-24!52;UBERON:0000033!1.25e-23!63;UBERON:0000955!2.15e-23!50;UBERON:0006238!2.15e-23!50;UBERON:0002616!1.53e-22!49;UBERON:0003056!3.84e-22!49;UBERON:0002020!1.28e-20!34;UBERON:0003080!1.62e-19!40;UBERON:0002780!8.50e-19!39;UBERON:0001890!8.50e-19!39;UBERON:0006240!8.50e-19!39;UBERON:0002791!2.69e-17!29;UBERON:0003528!2.69e-17!29;UBERON:0001893!2.69e-17!29;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0007811!4.91e-11!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.25e-09!10;UBERON:0000411!3.25e-09!10;UBERON:0001950!3.25e-09!10;UBERON:0000153!3.45e-09!94;UBERON:0002420!8.94e-07!8;UBERON:0007245!8.94e-07!8;UBERON:0010009!8.94e-07!8;UBERON:0010011!8.94e-07!8;UBERON:0000454!8.94e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-35,73;UBERON:0001016,5.94e-34,75;UBERON:0002346,1.53e-29,64;UBERON:0003075,1.53e-29,64;UBERON:0007284,1.53e-29,64;UBERON:0004121,4.54e-29,95;UBERON:0000924,4.54e-29,95;UBERON:0006601,4.54e-29,95;UBERON:0000073,6.52e-29,54;UBERON:0002020,7.25e-28,34;UBERON:0001049,8.84e-27,52;UBERON:0005068,8.84e-27,52;UBERON:0006241,8.84e-27,52;UBERON:0007135,8.84e-27,52;UBERON:0010371,1.13e-23,73;UBERON:0003528,2.25e-23,29;UBERON:0002791,2.25e-23,29;UBERON:0001893,2.25e-23,29;UBERON:0000955,1.15e-22,47;UBERON:0006238,1.15e-22,47;UBERON:0002616,1.29e-21,46;UBERON:0003056,6.06e-21,49;UBERON:0003080,7.71e-20,40;UBERON:0002780,6.17e-19,39;UBERON:0001890,6.17e-19,39;UBERON:0006240,6.17e-19,39;UBERON:0000956,5.85e-16,21;UBERON:0001869,5.85e-16,21;UBERON:0000203,5.85e-16,21;UBERON:0010314,3.14e-15,92;UBERON:0002619,6.80e-13,17;UBERON:0002021,7.40e-12,10;UBERON:0000411,7.40e-12,10;UBERON:0001950,7.40e-12,10;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7459370341547,11.1088105647127,6.97214543856797,0,0,0,0,0,0,1.15265491596466,3.94020526772215,6.61529097825284,3.36519938162211,11.9973413449598,11.9269012113871,4.77714116938321,7.09256485534949,2.75765635983006,15.4162233399144,23.6221575457597,23.5017995882053,10.8146755938759,18.754966938494,22.9201883044974,12.8424179540635,16.8828783009504,27.8092810953794,13.5529149317887,19.0778052270798,13.7935589910722,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0.29688427812965,0.346970653532272,0,0,0.753613202763113,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0,0,0,0,14.3462590535658,16.9651832518899,0,0,0,0,19.472783122627,21.5025283324754,19.6020789296068,35.4601613192244,39.6358958862012,24.103413168909,27.5810147215188,1.32391173005411,0,0.252722758433675,1.26265113531884,0.130120442962704,0.689706313300419,0.540186389416048,1.35634336052144,2.78949646520444,2.94661556655154,4.02917415606834,4.9153640440413,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,25.2347938276953,11.1136981369627,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,9.79358598925531,11.7211686592203,0,0,1.89304931649754,1.17131623288992,2.80050417052639,1.43381278771531,1.11399337041197,1.41538265394416,2.83367491172426,4.09158201075837,1.97643888973262,35.024023489977,0,0.35613120733451,0.81443479676788,0,0,0.242780636154981,1.209294227859,0,0,0,1.03371317267288,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,8.34413859047294,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,0.216010681643603,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4498623996411,27.1591889539234,33.227939779485,14.4356673168698,32.8839609489908,30.9711497929777,36.4512150125175,36.9263386643861,28.5479717660049,29.5123377698537,0.207574695168353,0.399024873401031,1.02440163452481,2.18796045361465,2.51535795153579,3.12533964365024,2.66696073361938,2.88449080134452,0.962757628775446,3.28506375292937,2.78827229879264,2.64076877940507,2.62196220915671,2.75308155340938,3.33125719942557,1.90517476513229,2.78122382267653,3.47236596834669,3.29668720642645,2.35518272215036,1.71434626192708,1.59728225543404,2.38436189947321,2.32554266611726,3.95259397744389,1.94613598150856,3.29270351170991,2.63069711437843,2.17286582153379,0.561142271657738,2.01679530811096,1.87158516513571,3.6830793885272,2.63392630016142,1.35034627686799,5.24602213669686,1.63752125911786,2.36358159453128,0.765153328275374,0.441182838239031,0.695603506861264|short_description=p1@Celf4}} | ||
|EntrezGene=108013 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q7TSY6 | |||
|association_with_transcript=55bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end | |||
|description=CAGE_peak_1_at_Celf4_5end | |||
|id=chr18:25912353..25912428,- | |||
|ontology_enrichment_celltype=CL:0000540!1.37e-17!33;CL:0000047!1.37e-17!33;CL:0000031!1.37e-17!33;CL:0000404!1.37e-17!33;CL:0000117!3.93e-15!23;CL:0000337!3.93e-15!23;CL:0000393!1.34e-12!39;CL:0000211!1.34e-12!39;CL:0002319!3.48e-12!43;CL:0000221!1.41e-11!44;CL:0000133!1.41e-11!44;CL:0000055!1.57e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.24e-22,33;CL:0000047,2.24e-22,33;CL:0000031,2.24e-22,33;CL:0000404,2.24e-22,33;CL:0000117,8.03e-20,23;CL:0000337,8.03e-20,23;CL:0000393,3.24e-17,39;CL:0000211,3.24e-17,39;CL:0002319,1.55e-15,43;CL:0000221,6.16e-15,44;CL:0000133,6.16e-15,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-30!73;UBERON:0005743!1.11e-30!73;UBERON:0000073!1.12e-30!75;UBERON:0001016!1.12e-30!75;UBERON:0002346!3.74e-27!71;UBERON:0003075!3.74e-27!71;UBERON:0007284!3.74e-27!71;UBERON:0004121!9.70e-26!102;UBERON:0000924!9.70e-26!102;UBERON:0006601!9.70e-26!102;UBERON:0001049!2.33e-24!52;UBERON:0005068!2.33e-24!52;UBERON:0006241!2.33e-24!52;UBERON:0007135!2.33e-24!52;UBERON:0000033!1.25e-23!63;UBERON:0000955!2.15e-23!50;UBERON:0006238!2.15e-23!50;UBERON:0002616!1.53e-22!49;UBERON:0003056!3.84e-22!49;UBERON:0002020!1.28e-20!34;UBERON:0003080!1.62e-19!40;UBERON:0002780!8.50e-19!39;UBERON:0001890!8.50e-19!39;UBERON:0006240!8.50e-19!39;UBERON:0002791!2.69e-17!29;UBERON:0003528!2.69e-17!29;UBERON:0001893!2.69e-17!29;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0007811!4.91e-11!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.25e-09!10;UBERON:0000411!3.25e-09!10;UBERON:0001950!3.25e-09!10;UBERON:0000153!3.45e-09!94;UBERON:0002420!8.94e-07!8;UBERON:0007245!8.94e-07!8;UBERON:0010009!8.94e-07!8;UBERON:0010011!8.94e-07!8;UBERON:0000454!8.94e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-35,73;UBERON:0001016,5.94e-34,75;UBERON:0002346,1.53e-29,64;UBERON:0003075,1.53e-29,64;UBERON:0007284,1.53e-29,64;UBERON:0004121,4.54e-29,95;UBERON:0000924,4.54e-29,95;UBERON:0006601,4.54e-29,95;UBERON:0000073,6.52e-29,54;UBERON:0002020,7.25e-28,34;UBERON:0001049,8.84e-27,52;UBERON:0005068,8.84e-27,52;UBERON:0006241,8.84e-27,52;UBERON:0007135,8.84e-27,52;UBERON:0010371,1.13e-23,73;UBERON:0003528,2.25e-23,29;UBERON:0002791,2.25e-23,29;UBERON:0001893,2.25e-23,29;UBERON:0000955,1.15e-22,47;UBERON:0006238,1.15e-22,47;UBERON:0002616,1.29e-21,46;UBERON:0003056,6.06e-21,49;UBERON:0003080,7.71e-20,40;UBERON:0002780,6.17e-19,39;UBERON:0001890,6.17e-19,39;UBERON:0006240,6.17e-19,39;UBERON:0000956,5.85e-16,21;UBERON:0001869,5.85e-16,21;UBERON:0000203,5.85e-16,21;UBERON:0010314,3.14e-15,92;UBERON:0002619,6.80e-13,17;UBERON:0002021,7.40e-12,10;UBERON:0000411,7.40e-12,10;UBERON:0001950,7.40e-12,10;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7459370341547,11.1088105647127,6.97214543856797,0,0,0,0,0,0,1.15265491596466,3.94020526772215,6.61529097825284,3.36519938162211,11.9973413449598,11.9269012113871,4.77714116938321,7.09256485534949,2.75765635983006,15.4162233399144,23.6221575457597,23.5017995882053,10.8146755938759,18.754966938494,22.9201883044974,12.8424179540635,16.8828783009504,27.8092810953794,13.5529149317887,19.0778052270798,13.7935589910722,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0.29688427812965,0.346970653532272,0,0,0.753613202763113,0.587943535678524,0.125666591329675,0,0.144599356919912,0,0,0,0,0,14.3462590535658,16.9651832518899,0,0,0,0,19.472783122627,21.5025283324754,19.6020789296068,35.4601613192244,39.6358958862012,24.103413168909,27.5810147215188,1.32391173005411,0,0.252722758433675,1.26265113531884,0.130120442962704,0.689706313300419,0.540186389416048,1.35634336052144,2.78949646520444,2.94661556655154,4.02917415606834,4.9153640440413,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0,0.134206418760372,25.2347938276953,11.1136981369627,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,9.79358598925531,11.7211686592203,0,0,1.89304931649754,1.17131623288992,2.80050417052639,1.43381278771531,1.11399337041197,1.41538265394416,2.83367491172426,4.09158201075837,1.97643888973262,35.024023489977,0,0.35613120733451,0.81443479676788,0,0,0.242780636154981,1.209294227859,0,0,0,1.03371317267288,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,8.34413859047294,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,0.216010681643603,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.4498623996411,27.1591889539234,33.227939779485,14.4356673168698,32.8839609489908,30.9711497929777,36.4512150125175,36.9263386643861,28.5479717660049,29.5123377698537,0.207574695168353,0.399024873401031,1.02440163452481,2.18796045361465,2.51535795153579,3.12533964365024,2.66696073361938,2.88449080134452,0.962757628775446,3.28506375292937,2.78827229879264,2.64076877940507,2.62196220915671,2.75308155340938,3.33125719942557,1.90517476513229,2.78122382267653,3.47236596834669,3.29668720642645,2.35518272215036,1.71434626192708,1.59728225543404,2.38436189947321,2.32554266611726,3.95259397744389,1.94613598150856,3.29270351170991,2.63069711437843,2.17286582153379,0.561142271657738,2.01679530811096,1.87158516513571,3.6830793885272,2.63392630016142,1.35034627686799,5.24602213669686,1.63752125911786,2.36358159453128,0.765153328275374,0.441182838239031,0.695603506861264 | |||
|short_description=p1@Celf4 | |||
}} |
Revision as of 15:51, 13 September 2013
Short description: | p1@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 55bp_to_ENSMUST00000025117, ENSMUST00000078609, ENSMUST00000115816, NM_001146292, NM_001146293, NM_001146294, NM_001146295, NM_001174074, NM_133195, uc008ehk.2, uc008ehl.2, uc012ban.1, uc012bao.1, uc012bap.1, uc012baq.1_5end |
EntrezGene: | Celf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.24e-22 | 33 |
neuronal stem cell | 2.24e-22 | 33 |
neuroblast | 2.24e-22 | 33 |
electrically signaling cell | 2.24e-22 | 33 |
CNS neuron (sensu Vertebrata) | 8.03e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.03e-20 | 23 |
electrically responsive cell | 3.24e-17 | 39 |
electrically active cell | 3.24e-17 | 39 |
neural cell | 1.55e-15 | 43 |
ectodermal cell | 6.16e-15 | 44 |
neurectodermal cell | 6.16e-15 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.