FFCP PHASE1:Mm9::chr18:21119803..21119851,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67664|HGNC=|MCL_coexpression_id=120|UniProt=Q9D9R0|association_with_transcript=-121bp_to_uc008efa.1_5end|description=CAGE_peak_4_at_Rnf125_5end|id=chr18:21119803..21119851,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,7.13e-11,25;CL:0002563,1.33e-09,9;CL:0002251,1.33e-09,9;CL:0000223,2.33e-09,20;CL:0000239,6.97e-08,6;CL:0000677,6.97e-08,6;CL:0000584,6.97e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.51e-12!130;UBERON:0000925!8.51e-12!130;UBERON:0006595!8.51e-12!130;UBERON:0003929!2.01e-11!55;UBERON:0001007!3.11e-11!128;UBERON:0001555!3.11e-11!128;UBERON:0007026!3.11e-11!128;UBERON:0009854!9.34e-11!23;UBERON:0009856!9.34e-11!23;UBERON:0004921!2.30e-10!126;UBERON:0004185!2.30e-10!126;UBERON:0002107!3.23e-10!22;UBERON:0007499!3.23e-10!22;UBERON:0006925!3.23e-10!22;UBERON:0009497!3.23e-10!22;UBERON:0000015!3.23e-10!22;UBERON:0002423!3.23e-10!22;UBERON:0006235!3.23e-10!22;UBERON:0008835!3.23e-10!22;UBERON:0003894!3.23e-10!22;UBERON:0004161!3.23e-10!22;UBERON:0008836!3.23e-10!22;UBERON:0000344!1.57e-09!15;UBERON:0005911!1.23e-08!69;UBERON:0000490!1.29e-08!66;UBERON:0001242!2.12e-08!13;UBERON:0000060!2.12e-08!13;UBERON:0001262!2.12e-08!13;UBERON:0004786!2.12e-08!13;UBERON:0000160!5.16e-08!43;UBERON:0002365!9.92e-08!25;UBERON:0002330!9.92e-08!25|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.59e-21,31;UBERON:0004119,3.18e-16,118;UBERON:0000925,3.18e-16,118;UBERON:0006595,3.18e-16,118;UBERON:0001007,5.35e-16,116;UBERON:0001555,5.35e-16,116;UBERON:0007026,5.35e-16,116;UBERON:0000344,2.83e-15,15;UBERON:0004921,1.39e-14,114;UBERON:0005409,1.74e-14,47;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0001242,2.47e-13,13;UBERON:0001262,2.47e-13,13;UBERON:0004786,2.47e-13,13;UBERON:0002107,7.89e-13,22;UBERON:0007499,7.89e-13,22;UBERON:0006925,7.89e-13,22;UBERON:0009497,7.89e-13,22;UBERON:0000015,7.89e-13,22;UBERON:0002423,7.89e-13,22;UBERON:0006235,7.89e-13,22;UBERON:0008835,7.89e-13,22;UBERON:0003894,7.89e-13,22;UBERON:0004161,7.89e-13,22;UBERON:0008836,7.89e-13,22;UBERON:0003929,1.05e-11,55;UBERON:0002365,1.20e-10,25;UBERON:0002330,1.20e-10,25;UBERON:0004923,4.17e-10,24;UBERON:0003350,1.33e-09,9;UBERON:0004808,1.33e-09,9;UBERON:0001277,1.33e-09,9;UBERON:0000490,2.63e-08,66;UBERON:0005911,1.38e-07,69;UBERON:0000485,1.91e-07,11|phase1_expression=0.320297694209588,34.1995899486574,30.0299497997094,13.6108895088074,12.5223932486587,15.4448930158939,14.0167584357315,0.516493293766305,2.25261955442667,2.34064526321993,0,0.0797721589953364,1.02720437958723,0.786783621770977,0,0,0,0,0.274228867211478,0,0,0,0,7.83962871687693,11.6998733344257,22.3950466004858,23.6919097887491,24.7791917588772,4.18051522804023,4.03248207615889,13.3038306393183,0,0,0,2.02196133825892,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.878744730937887,0.58328969722285,0.55994568650145,0,0,2.90144856804538,1.68046899571232,0.257259436035947,0.286533439938757,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,17.7956554332983,20.2531781086185,0.289864488701678,89.4840832060642,74.1168753741448,74.4790404460188,40.2861378817555,63.6198179678217,5.05599912474307,0,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,22.0374887857786,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,1.29347577849275,1.63366568728578,1.97755974187499,0.433798070759735,0,0,0.220841518460394,0,5.59175283654366,0,0,3.32094171771169,1.07833612055328,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,89.8586724635244,0,0,0,0.30140963567143,0,0,0.0937017245597288,10.8655415710387,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,15.8601015832223,3.43785736662608,0,0.232236671860439,1.03093969057675,0.403367049246685,1.11189021922435,1.33157938278791,2.37264530772256,1.4822905925161,3.77002813200404,5.37182474511107,2.53453313254856,1.79763881730844,4.10662294761919,10.1562049359727,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.493588655687202,4.44678940630723,0.333690211432188,0.196558995113203,0,0.608580364165509,0.241177159752417,1.52775511068852,5.75392274901621,62.9084679887137,24.4359657737393,30.1913233707445,35.7255309761763,29.6435789458833,87.1397128917536,114.993742067546,298.632539723924,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0,0,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| ||
|EntrezGene=67664 | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=Q9D9R0 | |||
|association_with_transcript=-121bp_to_uc008efa.1_5end | |||
|description=CAGE_peak_4_at_Rnf125_5end | |||
|id=chr18:21119803..21119851,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.13e-11,25;CL:0002563,1.33e-09,9;CL:0002251,1.33e-09,9;CL:0000223,2.33e-09,20;CL:0000239,6.97e-08,6;CL:0000677,6.97e-08,6;CL:0000584,6.97e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.51e-12!130;UBERON:0000925!8.51e-12!130;UBERON:0006595!8.51e-12!130;UBERON:0003929!2.01e-11!55;UBERON:0001007!3.11e-11!128;UBERON:0001555!3.11e-11!128;UBERON:0007026!3.11e-11!128;UBERON:0009854!9.34e-11!23;UBERON:0009856!9.34e-11!23;UBERON:0004921!2.30e-10!126;UBERON:0004185!2.30e-10!126;UBERON:0002107!3.23e-10!22;UBERON:0007499!3.23e-10!22;UBERON:0006925!3.23e-10!22;UBERON:0009497!3.23e-10!22;UBERON:0000015!3.23e-10!22;UBERON:0002423!3.23e-10!22;UBERON:0006235!3.23e-10!22;UBERON:0008835!3.23e-10!22;UBERON:0003894!3.23e-10!22;UBERON:0004161!3.23e-10!22;UBERON:0008836!3.23e-10!22;UBERON:0000344!1.57e-09!15;UBERON:0005911!1.23e-08!69;UBERON:0000490!1.29e-08!66;UBERON:0001242!2.12e-08!13;UBERON:0000060!2.12e-08!13;UBERON:0001262!2.12e-08!13;UBERON:0004786!2.12e-08!13;UBERON:0000160!5.16e-08!43;UBERON:0002365!9.92e-08!25;UBERON:0002330!9.92e-08!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.59e-21,31;UBERON:0004119,3.18e-16,118;UBERON:0000925,3.18e-16,118;UBERON:0006595,3.18e-16,118;UBERON:0001007,5.35e-16,116;UBERON:0001555,5.35e-16,116;UBERON:0007026,5.35e-16,116;UBERON:0000344,2.83e-15,15;UBERON:0004921,1.39e-14,114;UBERON:0005409,1.74e-14,47;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0001242,2.47e-13,13;UBERON:0001262,2.47e-13,13;UBERON:0004786,2.47e-13,13;UBERON:0002107,7.89e-13,22;UBERON:0007499,7.89e-13,22;UBERON:0006925,7.89e-13,22;UBERON:0009497,7.89e-13,22;UBERON:0000015,7.89e-13,22;UBERON:0002423,7.89e-13,22;UBERON:0006235,7.89e-13,22;UBERON:0008835,7.89e-13,22;UBERON:0003894,7.89e-13,22;UBERON:0004161,7.89e-13,22;UBERON:0008836,7.89e-13,22;UBERON:0003929,1.05e-11,55;UBERON:0002365,1.20e-10,25;UBERON:0002330,1.20e-10,25;UBERON:0004923,4.17e-10,24;UBERON:0003350,1.33e-09,9;UBERON:0004808,1.33e-09,9;UBERON:0001277,1.33e-09,9;UBERON:0000490,2.63e-08,66;UBERON:0005911,1.38e-07,69;UBERON:0000485,1.91e-07,11 | |||
|phase1_expression=0.320297694209588,34.1995899486574,30.0299497997094,13.6108895088074,12.5223932486587,15.4448930158939,14.0167584357315,0.516493293766305,2.25261955442667,2.34064526321993,0,0.0797721589953364,1.02720437958723,0.786783621770977,0,0,0,0,0.274228867211478,0,0,0,0,7.83962871687693,11.6998733344257,22.3950466004858,23.6919097887491,24.7791917588772,4.18051522804023,4.03248207615889,13.3038306393183,0,0,0,2.02196133825892,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.878744730937887,0.58328969722285,0.55994568650145,0,0,2.90144856804538,1.68046899571232,0.257259436035947,0.286533439938757,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,17.7956554332983,20.2531781086185,0.289864488701678,89.4840832060642,74.1168753741448,74.4790404460188,40.2861378817555,63.6198179678217,5.05599912474307,0,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,22.0374887857786,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,1.29347577849275,1.63366568728578,1.97755974187499,0.433798070759735,0,0,0.220841518460394,0,5.59175283654366,0,0,3.32094171771169,1.07833612055328,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,89.8586724635244,0,0,0,0.30140963567143,0,0,0.0937017245597288,10.8655415710387,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,15.8601015832223,3.43785736662608,0,0.232236671860439,1.03093969057675,0.403367049246685,1.11189021922435,1.33157938278791,2.37264530772256,1.4822905925161,3.77002813200404,5.37182474511107,2.53453313254856,1.79763881730844,4.10662294761919,10.1562049359727,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.493588655687202,4.44678940630723,0.333690211432188,0.196558995113203,0,0.608580364165509,0.241177159752417,1.52775511068852,5.75392274901621,62.9084679887137,24.4359657737393,30.1913233707445,35.7255309761763,29.6435789458833,87.1397128917536,114.993742067546,298.632539723924,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0.32977250588296,2.42196640043858,0.361877549568935,0.835606408021955,1.64140899745061,2.04036585640896,0,0,0,0.185194527369712,0,0.27338845544205,0,3.39956859987711,1.6794174278839,2.07299960706636,0,0,0,0.432021363287205,0,0.87345025498471,1.34864346384821,3.05817786183743,0.523511883968059,4.53652406521275,0,0,0,0.165458490457098,0,0,0,0,0.911430693907651,0,0,0.288030006257865,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.403865799792591,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.467507608726276,0.453460767230423,0.221985953374065,0.179427713218951,0.671538465456314,1.73870634628971,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0,0,1.40358965067245,7.73535794573874,1.14772999241306,0.661774257358546,0 | |||
|short_description=p4@Rnf125 | |||
}} |
Revision as of 15:47, 13 September 2013
Short description: | p4@Rnf125 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rnf125_5end |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | -121bp_to_uc008efa.1_5end |
EntrezGene: | Rnf125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.13e-11 | 25 |
intestinal epithelial cell | 1.33e-09 | 9 |
epithelial cell of alimentary canal | 1.33e-09 | 9 |
endodermal cell | 2.33e-09 | 20 |
brush border epithelial cell | 6.97e-08 | 6 |
gut absorptive cell | 6.97e-08 | 6 |
enterocyte | 6.97e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.