FFCP PHASE1:Hg19::chr5:42993321..42993352,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=82bp_to_uc003jnb.1_5end|coexpression_cluster_id=C4502|description=CAGE_peak_2_at_uc003jnb.1_5end|id=chr5:42993321..42993352,-|ontology_enrichment_celltype=CL:0002057!5.36e-27!42;CL:0000860!2.90e-26!45;CL:0000766!4.00e-25!76;CL:0002194!1.19e-22!63;CL:0000576!1.19e-22!63;CL:0000040!1.19e-22!63;CL:0000559!1.19e-22!63;CL:0000048!2.03e-22!430;CL:0002320!2.22e-21!365;CL:0000723!3.22e-21!436;CL:0002009!6.48e-21!65;CL:0000034!9.02e-21!444;CL:0000839!4.04e-20!70;CL:0000557!9.91e-20!71;CL:0000134!1.12e-19!358;CL:0002371!1.52e-15!591;CL:0000763!2.26e-15!112;CL:0000049!2.26e-15!112;CL:0000219!1.76e-14!390;CL:0002087!4.77e-12!119;CL:0000738!8.60e-12!140;CL:0000144!1.47e-10!625;CL:0000003!4.42e-10!722;CL:0002031!5.30e-10!124;CL:0000037!8.73e-10!172;CL:0000566!8.73e-10!172;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000988!4.12e-09!182;CL:0000012!6.12e-08!682;CL:0000548!3.56e-07!679;CL:0000004!3.56e-07!679;CL:0000255!3.56e-07!679|ontology_enrichment_celltype_v019=CL:0000860;6.98e-32;33!CL:0002057;6.98e-32;33!CL:0000576;6.30e-24;48!CL:0000473;1.05e-23;39!CL:0000234;1.05e-23;39!CL:0000766;2.74e-16;69!CL:0000763;7.68e-09;100!CL:0000094;5.35e-08;8|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-40,42;CL:0002057,1.26e-40,42;CL:0000473,1.66e-36,48;CL:0000234,1.66e-36,48;CL:0000766,1.08e-32,72;CL:0002194,4.13e-30,59;CL:0000576,4.13e-30,59;CL:0000040,4.13e-30,59;CL:0000559,4.13e-30,59;CL:0002009,1.66e-28,61;CL:0000557,1.23e-25,67;CL:0000839,6.09e-25,66;CL:0000763,3.04e-21,108;CL:0000049,3.04e-21,108;CL:0000048,5.66e-18,427;CL:0000034,1.67e-17,441;CL:0000723,4.55e-17,433;CL:0000738,1.44e-16,136;CL:0002320,1.86e-16,361;CL:0002087,4.89e-16,115;CL:0000134,1.80e-15,354;CL:0000037,1.60e-13,168;CL:0002032,2.97e-13,161;CL:0000837,2.97e-13,161;CL:0000219,1.27e-12,386;CL:0002031,1.73e-12,120;CL:0000988,1.08e-11,177;CL:0000094,3.70e-08,8;CL:0002393,2.73e-07,9;CL:0002397,2.73e-07,9|ontology_enrichment_development_v019=CL:0002057;3.16e-29;42!CL:0000049;4.46e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.68e-24!112;UBERON:0002390!1.80e-21!102;UBERON:0003061!1.80e-21!102;UBERON:0004765!3.64e-20!101;UBERON:0001434!3.64e-20!101;UBERON:0002384!4.96e-20!375;UBERON:0002371!8.53e-20!80;UBERON:0002405!1.64e-19!115;UBERON:0001474!4.28e-19!86;UBERON:0002204!1.19e-17!167;UBERON:0003081!2.56e-11!216;UBERON:0000926!2.55e-09!448;UBERON:0004120!2.55e-09!448;UBERON:0006603!2.55e-09!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.68e-27,108;UBERON:0002390,2.74e-25,98;UBERON:0003061,2.74e-25,98;UBERON:0002371,1.75e-23,76;UBERON:0002405,7.65e-23,93;UBERON:0004765,7.88e-22,90;UBERON:0001474,1.22e-21,82;UBERON:0001434,6.01e-20,100;UBERON:0002204,5.60e-17,167;UBERON:0002384,2.60e-16,371;UBERON:0003081,1.03e-15,203;UBERON:0000926,1.77e-13,315;UBERON:0004120,1.77e-13,315;UBERON:0006603,1.77e-13,315|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,2.84662611808107,0.994192127183747,0,1.20538905604795,0,1.46379839637152,0.123121058076788,1.22400414746552,0,0,0,0,0,0,0,7.08055698328027,4.98978217526377,2.47705797305722,0,0.6024118375565,0.369754010166788,0,0,0.880801318004542,3.32397245119126,2.20598892217156,3.03815219002193,0.671746422719773,0.32389366601898,0.257575567634187,8.43309784921475,5.29026321164333,11.4014508758274,5.57829688573643,5.34518254428373,7.74265927237759,25.6046229166714,14.0888388591005,25.3035985980786,12.4108445065183,7.10033151942209,9.47985406160392,7.71793592124679,5.45812300115692,7.86532195557796,19.2832852193669,12.5162320559677,19.1801137739712,16.8224163095225,16.5554835825954,28.1308335351578,15.6712988859435,3.40431134814684,13.0792672289071,23.6173745341339,14.6015217157656,22.370451004627,7.87019353423379,5.89244217580104,15.5066569846033,1.47878700418359,2.55125159958052,2.72556239160889,4.04383072127382,4.50530678524519,3.2145117339416,1.71007646244749,1.59133341759272,2.19196984517561,0,0,0,0,0.800791974072025,1.14950487990897,0,2.86216126360609,0,1.76171156811282,0.382273228125229,5.28685314316103,1.12101712596307,2.10707267820062,0.590129310341499,1.17903228824749,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.886135578334485,0.541607727530031,0.896639238079726,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,1.37450978193052,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.76791966692651,0,1.18388626022008,0,1.61285394579786,1.60464117470104,1.15859523106239,0,2.68280343881454,0.255725123687061,0.361439152384566,0,2.17269778441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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=82bp_to_uc003jnb.1_5end | |||
|coexpression_cluster_id=C4502 | |||
|description=CAGE_peak_2_at_uc003jnb.1_5end | |||
|id=chr5:42993321..42993352,- | |||
|ontology_enrichment_celltype=CL:0002057!5.36e-27!42;CL:0000860!2.90e-26!45;CL:0000766!4.00e-25!76;CL:0002194!1.19e-22!63;CL:0000576!1.19e-22!63;CL:0000040!1.19e-22!63;CL:0000559!1.19e-22!63;CL:0000048!2.03e-22!430;CL:0002320!2.22e-21!365;CL:0000723!3.22e-21!436;CL:0002009!6.48e-21!65;CL:0000034!9.02e-21!444;CL:0000839!4.04e-20!70;CL:0000557!9.91e-20!71;CL:0000134!1.12e-19!358;CL:0002371!1.52e-15!591;CL:0000763!2.26e-15!112;CL:0000049!2.26e-15!112;CL:0000219!1.76e-14!390;CL:0002087!4.77e-12!119;CL:0000738!8.60e-12!140;CL:0000144!1.47e-10!625;CL:0000003!4.42e-10!722;CL:0002031!5.30e-10!124;CL:0000037!8.73e-10!172;CL:0000566!8.73e-10!172;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000988!4.12e-09!182;CL:0000012!6.12e-08!682;CL:0000548!3.56e-07!679;CL:0000004!3.56e-07!679;CL:0000255!3.56e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-32;33!CL:0002057;6.98e-32;33!CL:0000576;6.30e-24;48!CL:0000473;1.05e-23;39!CL:0000234;1.05e-23;39!CL:0000766;2.74e-16;69!CL:0000763;7.68e-09;100!CL:0000094;5.35e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-40,42;CL:0002057,1.26e-40,42;CL:0000473,1.66e-36,48;CL:0000234,1.66e-36,48;CL:0000766,1.08e-32,72;CL:0002194,4.13e-30,59;CL:0000576,4.13e-30,59;CL:0000040,4.13e-30,59;CL:0000559,4.13e-30,59;CL:0002009,1.66e-28,61;CL:0000557,1.23e-25,67;CL:0000839,6.09e-25,66;CL:0000763,3.04e-21,108;CL:0000049,3.04e-21,108;CL:0000048,5.66e-18,427;CL:0000034,1.67e-17,441;CL:0000723,4.55e-17,433;CL:0000738,1.44e-16,136;CL:0002320,1.86e-16,361;CL:0002087,4.89e-16,115;CL:0000134,1.80e-15,354;CL:0000037,1.60e-13,168;CL:0002032,2.97e-13,161;CL:0000837,2.97e-13,161;CL:0000219,1.27e-12,386;CL:0002031,1.73e-12,120;CL:0000988,1.08e-11,177;CL:0000094,3.70e-08,8;CL:0002393,2.73e-07,9;CL:0002397,2.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.16e-29;42!CL:0000049;4.46e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.68e-24!112;UBERON:0002390!1.80e-21!102;UBERON:0003061!1.80e-21!102;UBERON:0004765!3.64e-20!101;UBERON:0001434!3.64e-20!101;UBERON:0002384!4.96e-20!375;UBERON:0002371!8.53e-20!80;UBERON:0002405!1.64e-19!115;UBERON:0001474!4.28e-19!86;UBERON:0002204!1.19e-17!167;UBERON:0003081!2.56e-11!216;UBERON:0000926!2.55e-09!448;UBERON:0004120!2.55e-09!448;UBERON:0006603!2.55e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.68e-27,108;UBERON:0002390,2.74e-25,98;UBERON:0003061,2.74e-25,98;UBERON:0002371,1.75e-23,76;UBERON:0002405,7.65e-23,93;UBERON:0004765,7.88e-22,90;UBERON:0001474,1.22e-21,82;UBERON:0001434,6.01e-20,100;UBERON:0002204,5.60e-17,167;UBERON:0002384,2.60e-16,371;UBERON:0003081,1.03e-15,203;UBERON:0000926,1.77e-13,315;UBERON:0004120,1.77e-13,315;UBERON:0006603,1.77e-13,315 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,2.84662611808107,0.994192127183747,0,1.20538905604795,0,1.46379839637152,0.123121058076788,1.22400414746552,0,0,0,0,0,0,0,7.08055698328027,4.98978217526377,2.47705797305722,0,0.6024118375565,0.369754010166788,0,0,0.880801318004542,3.32397245119126,2.20598892217156,3.03815219002193,0.671746422719773,0.32389366601898,0.257575567634187,8.43309784921475,5.29026321164333,11.4014508758274,5.57829688573643,5.34518254428373,7.74265927237759,25.6046229166714,14.0888388591005,25.3035985980786,12.4108445065183,7.10033151942209,9.47985406160392,7.71793592124679,5.45812300115692,7.86532195557796,19.2832852193669,12.5162320559677,19.1801137739712,16.8224163095225,16.5554835825954,28.1308335351578,15.6712988859435,3.40431134814684,13.0792672289071,23.6173745341339,14.6015217157656,22.370451004627,7.87019353423379,5.89244217580104,15.5066569846033,1.47878700418359,2.55125159958052,2.72556239160889,4.04383072127382,4.50530678524519,3.2145117339416,1.71007646244749,1.59133341759272,2.19196984517561,0,0,0,0,0.800791974072025,1.14950487990897,0,2.86216126360609,0,1.76171156811282,0.382273228125229,5.28685314316103,1.12101712596307,2.10707267820062,0.590129310341499,1.17903228824749,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0.886135578334485,0.541607727530031,0.896639238079726,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,1.37450978193052,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.76791966692651,0,1.18388626022008,0,1.61285394579786,1.60464117470104,1.15859523106239,0,2.68280343881454,0.255725123687061,0.361439152384566,0,2.17269778441236,2.3858578411533,0.973269740605272,0,0.443458794925128,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.238490624305342,0,0.371457501329565,1.98762407366705,0,0.694281003215189,0.56530794192401,0.419499436209906,3.85165258716094,0.626984899610432,3.6178346283706,3.20189636418039,0.66944122552934,0.805658634218294,3.04108842287405,0,1.47065232138347,0,1.60739510911344,1.12264686313085,1.0135033243499,0,4.74632829784064,0.549605231791222,5.27121669744253,11.6334079244498,0.872188104285069,0,0,0.529636723252875,0,1.06400514659507,0,2.1349799145941,0.24666754841716,0.622422070799533,1.61652806483626,0.817309515567294,0.302714855289863,0.576175924479999,1.17160715916898,1.24864030732128,1.1409436430889,1.49448680551801,0.469737994575059,0.323745888736263,0.561803226808994,2.85815839756851,2.08818339430006,2.27316718586684,0,1.7308685049499,5.46096817162816,5.74894513452991,1.5150250255866,0.750711119231785,1.10825646193673,0.877955241761676,0.612975591598039,0.751190294532984,1.36118619792025,0.358779271377724,0.427114777637135,1.27159140695737,0,0.515262646192195,1.28820270022815,1.67505170698431,0.843881661206331,0.876933046450788,0.757301322732344,0.920498986422993,0.323292113637624,0.710019185033229,0.503760491138201,1.18692414617341,0.193260853163297,1.09098448236334,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0.643240938192885,4.14404764057442,2.78620756819187,0.721879481669586,0.354920400119532,0.168584690078102,0.723033089650446,0.661763836394364,1.08939722046203,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,4.42893272774789,2.80483547606892,0,0,0,0,0.590789906681404,0,0,0.857839051492628,0,0,0,0.555530670951178,0.325808305310325,3.11980435583874,0,0,0,1.73239737313289,0.925971025153221,1.52203321787679,0,0,0.738651018262192,0.468008530278475,2.37809859661965,0.93733833986777,0.16798212819886,0.850650583454319,0,0.290633938513962,0.383382679165211,0,0.264145302039678,0,0.720599767084807,0.88369703398466,0.126995788584338,0,0,0,0.102827492703324,0,0,0.672786506072164,0,0.7333828582095,0.387815147273333,3.57656445851882,0,1.06375246633948,0,0.771622122786426,0,2.1313774321288,1.28680194292333,1.62786481617433,0,1.30294473717494,0.710783897485092,0.791951872933429,0,0,0,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0,0.410952645100767,0.716243852959582,0.448340575974109,2.36436912242313,1.94064817373566,2.31017465303547,0,0,0,0,0,1.49801404789436,2.99161459204025,6.63064821497657,1.71768088406796,2.00068208423871,1.35632511849868,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,3.10419213877515,0,0.184369168541703,1.65078867489357,0.391602314925481,0.686286847621712,1.6541442089831,3.01999881146064,1.49418580924822,0,0,0,0.496215615637554,0.306923946576125,0,1.40953064181271,1.02341449813341,0.160853921143607,0,1.69630663182921,0.710246901252508,1.56041596426237,3.63478100428535,0.929683027679674,0,0,0,1.03333003348146,0.728364672026868,0.917870904715969,0,0.15403067420883,0,0,0,0,1.02056223165909,0.431831832204279,0,0.270946437543853,0,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| |||
|short_description=p2@uc003jnb.1 | |||
}} |
Revision as of 15:43, 13 September 2013
Short description: | p2@uc003jnb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc003jnb.1_5end |
Coexpression cluster: | C4502_CD14_large_alveolar_embryonic_clear_acute_bronchogenic |
Association with transcript: | 82bp_to_uc003jnb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.68e-27 | 108 |
hematopoietic system | 2.74e-25 | 98 |
blood island | 2.74e-25 | 98 |
bone marrow | 1.75e-23 | 76 |
immune system | 7.65e-23 | 93 |
skeletal element | 7.88e-22 | 90 |
bone element | 1.22e-21 | 82 |
skeletal system | 6.01e-20 | 100 |
musculoskeletal system | 5.60e-17 | 167 |
connective tissue | 2.60e-16 | 371 |
lateral plate mesoderm | 1.03e-15 | 203 |
mesoderm | 1.77e-13 | 315 |
mesoderm-derived structure | 1.77e-13 | 315 |
presumptive mesoderm | 1.77e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.