FFCP PHASE1:Hg19::chr5:42804827..42804883,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C951|description=CAGE_peak_at_chr5:42804827..42804883,-|id=chr5:42804827..42804883,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002619;7.91e-09;3!CL:0000235;3.65e-07;6!CL:0000182;4.12e-07;12|ontology_enrichment_celltype_v019_2=CL:0002619,7.64e-09,3;CL:0000235,4.05e-07,6;CL:0000182,4.55e-07,12|ontology_enrichment_development_v019=UBERON:0004161;1.63e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.72e-49!115;UBERON:0001049!1.56e-18!57;UBERON:0005068!1.56e-18!57;UBERON:0006241!1.56e-18!57;UBERON:0007135!1.56e-18!57;UBERON:0002346!9.21e-15!90;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002616!7.21e-14!59;UBERON:0005743!7.50e-14!86;UBERON:0001017!1.16e-13!82;UBERON:0000073!1.29e-12!94;UBERON:0001016!1.29e-12!94;UBERON:0003080!2.19e-12!42;UBERON:0000955!6.00e-12!69;UBERON:0006238!6.00e-12!69;UBERON:0002780!1.09e-11!41;UBERON:0001890!1.09e-11!41;UBERON:0006240!1.09e-11!41;UBERON:0000062!1.96e-10!511;UBERON:0002020!6.44e-10!34;UBERON:0003528!6.44e-10!34;UBERON:0001893!1.88e-09!34;UBERON:0002791!4.25e-09!33;UBERON:0000468!8.10e-09!659;UBERON:0000481!1.27e-08!347;UBERON:0002298!2.89e-08!8;UBERON:0003056!2.95e-08!61;UBERON:0001869!3.85e-08!32;UBERON:0002308!1.16e-07!9;UBERON:0000125!1.16e-07!9;UBERON:0003076!1.23e-07!15;UBERON:0003057!1.23e-07!15;UBERON:0000064!2.32e-07!219;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000922!4.74e-07!612;UBERON:0000477!6.01e-07!286;UBERON:0000153!6.40e-07!129;UBERON:0007811!6.40e-07!129|ontology_enrichment_uberon_v019=UBERON:0007023;1.15e-09;114!UBERON:0006947;1.65e-08;3!UBERON:0004054;1.65e-08;3!UBERON:0002107;2.24e-07;19!UBERON:0006925;2.24e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.83e-34,114;UBERON:0001049,7.49e-11,56;UBERON:0005068,7.49e-11,56;UBERON:0006241,7.49e-11,56;UBERON:0007135,7.49e-11,56;UBERON:0011216,2.23e-10,223;UBERON:0000073,4.49e-09,53;UBERON:0002616,4.49e-09,53;UBERON:0006947,1.74e-08,3;UBERON:0004054,1.74e-08,3;UBERON:0000025,4.00e-08,192;UBERON:0002346,7.43e-08,86;UBERON:0003075,1.15e-07,82;UBERON:0007284,1.15e-07,82;UBERON:0001017,1.59e-07,81;UBERON:0002107,2.38e-07,19;UBERON:0006925,2.38e-07,19;UBERON:0008836,2.38e-07,19;UBERON:0004111,2.69e-07,240;UBERON:0001016,3.67e-07,89;UBERON:0009854,3.77e-07,23;UBERON:0000955,7.33e-07,68;UBERON:0006238,7.33e-07,68;UBERON:0010314,9.11e-07,132;UBERON:0003076,9.79e-07,15;UBERON:0003057,9.79e-07,15|phase1_expression=1.09007027562334,1.49870366723688,2.67813367782345,0,2.23480547213644,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,15.4501677225548,8.74512898251245,13.9090806522461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,19.0132552232746,13.7595810334868,18.3144871071235,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,2.21595305478658,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,8.51366464488333,11.5519131029389,16.8667151586425,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,1.02511319404561,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,9.58281408323817,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.56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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C951 | |||
|description=CAGE_peak_at_chr5:42804827..42804883,- | |||
|id=chr5:42804827..42804883,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;7.91e-09;3!CL:0000235;3.65e-07;6!CL:0000182;4.12e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.64e-09,3;CL:0000235,4.05e-07,6;CL:0000182,4.55e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.63e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-49!115;UBERON:0001049!1.56e-18!57;UBERON:0005068!1.56e-18!57;UBERON:0006241!1.56e-18!57;UBERON:0007135!1.56e-18!57;UBERON:0002346!9.21e-15!90;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002616!7.21e-14!59;UBERON:0005743!7.50e-14!86;UBERON:0001017!1.16e-13!82;UBERON:0000073!1.29e-12!94;UBERON:0001016!1.29e-12!94;UBERON:0003080!2.19e-12!42;UBERON:0000955!6.00e-12!69;UBERON:0006238!6.00e-12!69;UBERON:0002780!1.09e-11!41;UBERON:0001890!1.09e-11!41;UBERON:0006240!1.09e-11!41;UBERON:0000062!1.96e-10!511;UBERON:0002020!6.44e-10!34;UBERON:0003528!6.44e-10!34;UBERON:0001893!1.88e-09!34;UBERON:0002791!4.25e-09!33;UBERON:0000468!8.10e-09!659;UBERON:0000481!1.27e-08!347;UBERON:0002298!2.89e-08!8;UBERON:0003056!2.95e-08!61;UBERON:0001869!3.85e-08!32;UBERON:0002308!1.16e-07!9;UBERON:0000125!1.16e-07!9;UBERON:0003076!1.23e-07!15;UBERON:0003057!1.23e-07!15;UBERON:0000064!2.32e-07!219;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000922!4.74e-07!612;UBERON:0000477!6.01e-07!286;UBERON:0000153!6.40e-07!129;UBERON:0007811!6.40e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.15e-09;114!UBERON:0006947;1.65e-08;3!UBERON:0004054;1.65e-08;3!UBERON:0002107;2.24e-07;19!UBERON:0006925;2.24e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.83e-34,114;UBERON:0001049,7.49e-11,56;UBERON:0005068,7.49e-11,56;UBERON:0006241,7.49e-11,56;UBERON:0007135,7.49e-11,56;UBERON:0011216,2.23e-10,223;UBERON:0000073,4.49e-09,53;UBERON:0002616,4.49e-09,53;UBERON:0006947,1.74e-08,3;UBERON:0004054,1.74e-08,3;UBERON:0000025,4.00e-08,192;UBERON:0002346,7.43e-08,86;UBERON:0003075,1.15e-07,82;UBERON:0007284,1.15e-07,82;UBERON:0001017,1.59e-07,81;UBERON:0002107,2.38e-07,19;UBERON:0006925,2.38e-07,19;UBERON:0008836,2.38e-07,19;UBERON:0004111,2.69e-07,240;UBERON:0001016,3.67e-07,89;UBERON:0009854,3.77e-07,23;UBERON:0000955,7.33e-07,68;UBERON:0006238,7.33e-07,68;UBERON:0010314,9.11e-07,132;UBERON:0003076,9.79e-07,15;UBERON:0003057,9.79e-07,15 | |||
|phase1_expression=1.09007027562334,1.49870366723688,2.67813367782345,0,2.23480547213644,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,15.4501677225548,8.74512898251245,13.9090806522461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,19.0132552232746,13.7595810334868,18.3144871071235,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,2.21595305478658,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,8.51366464488333,11.5519131029389,16.8667151586425,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,1.02511319404561,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,9.58281408323817,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.562677665642051,0,0,0,2.19172787076177,1.10513566212459,0,0,0,0,0,0,0,0.986434056369336,0,0,0,1.20598527610407,0,0,0.174919999992391,2.17499872630438,0,0.254253650292766,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,1.47773809476774,0.87754158861589,0,0.139423744278603,0.846452843541768,0,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,2.29989667708682,4.888241159469,0,0,0,0.943615861729479,3.21031058919516,3.27970224015475,0,0.19566461893209,0,3.55125962564451,3.62972148145992,0,1.5796644907122,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,5.06707337901887,0,0,0,0,0.969890164884194,0,1.35588444468319,0,0,0.253243183823515,0,0,2.13452994739353,0.799238438328521,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,1.20084057741958,2.19048606227189,0,0,0,0.837847203816763,1.3749625440701,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,0,0,2.12714592229504,3.29663433524666,2.49393112260484,0,0,0,0.953423842781029,0,0,0.415440338029185,0,0,0.303747783290123,0,0.788057072991982,0.314727528809989,0,0,0,8.5763439164804,1.32418394073086,0,0.542999601753713,0,0.326587360109409,0,0,0,0.453248366080503,8.79313402068495,9.27548222385549,1.68067843270016,3.83474545053801,0,0,4.37828391527548,1.72924735609633,4.14239055347196,2.97699613087171,0.197611631897944,0,0.638341257770182,0.544017803369474,2.2562090462043,0.612691153526923,0.983617892129413,0,0,1.58634144372552,1.001527445652,2.29363678276028,2.44043913381075,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.06287460050841,0.743614585554013,0,0,0,0,0,0.3062454773532,0.0642292250964595,2.8339315265117,1.43670473151436,2.2562800066483,0.252071696221718,0.0691572524642179,1.29180516505481,15.704636228507,0,0,0,0,0,0,0.994581110581374,0.601682626794058,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,5.95453414067153,0,0,0,0,1.82089681270989,0.227662191351298,0.79832133146375,0,0,0.40781839786099,0.263091094251396,0,0,1.0989032999072,0.471346769748006,0,3.65263488203798,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,16.5120949574462,0,0,0,0,0,0.121917924982269,1.29485767437579,0.410651227424988,0,6.31424290976881,0.233939463462106,0,0,0,0,0,7.56306749457858,8.52382285965433,1.41095188908457,0.735444965261716,0.235676547101626,5.30032861210352,2.67341760294377,0.8453114551668,0,2.81951753939561,0.322289439867886,0,0,0,0,0,0.458729283404541,5.44690415975515,0,0,0.436350690340377,6.34832208618481,0,0.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| |||
|short_description=p@chr5:42804827..42804883,- | |||
}} |
Revision as of 15:42, 13 September 2013
Short description: | p@chr5:42804827..42804883, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:42804827..42804883, - |
Coexpression cluster: | C951_CD14_Hepatocyte_liver_small_Monocytederived_substantia_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.64e-09 | 3 |
macrophage | 4.05e-07 | 6 |
hepatocyte | 4.55e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.83e-34 | 114 |
neural tube | 7.49e-11 | 56 |
neural rod | 7.49e-11 | 56 |
future spinal cord | 7.49e-11 | 56 |
neural keel | 7.49e-11 | 56 |
organ system subdivision | 2.23e-10 | 223 |
regional part of nervous system | 4.49e-09 | 53 |
regional part of brain | 4.49e-09 | 53 |
male genital duct | 1.74e-08 | 3 |
internal male genitalia | 1.74e-08 | 3 |
tube | 4.00e-08 | 192 |
neurectoderm | 7.43e-08 | 86 |
neural plate | 1.15e-07 | 82 |
presumptive neural plate | 1.15e-07 | 82 |
central nervous system | 1.59e-07 | 81 |
liver | 2.38e-07 | 19 |
digestive gland | 2.38e-07 | 19 |
liver bud | 2.38e-07 | 19 |
anatomical conduit | 2.69e-07 | 240 |
nervous system | 3.67e-07 | 89 |
digestive tract diverticulum | 3.77e-07 | 23 |
brain | 7.33e-07 | 68 |
future brain | 7.33e-07 | 68 |
structure with developmental contribution from neural crest | 9.11e-07 | 132 |
posterior neural tube | 9.79e-07 | 15 |
chordal neural plate | 9.79e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.