FFCP PHASE1:Hg19::chr5:39274617..39274636,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2533|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4036|TSSclassifier=S|UniProt=D6RFJ5|association_with_transcript=0bp_to_ENST00000510188_5end|coexpression_cluster_id=C294|description=CAGE_peak_7_at_FYB_5end|id=chr5:39274617..39274636,-|ontology_enrichment_celltype=CL:0000766!4.97e-48!76;CL:0002009!5.62e-44!65;CL:0002194!4.25e-42!63;CL:0000576!4.25e-42!63;CL:0000040!4.25e-42!63;CL:0000559!4.25e-42!63;CL:0000557!1.23e-41!71;CL:0000839!5.84e-39!70;CL:0002057!2.33e-36!42;CL:0000738!2.34e-34!140;CL:0000860!5.49e-33!45;CL:0000763!1.38e-32!112;CL:0000049!1.38e-32!112;CL:0002087!2.16e-28!119;CL:0002031!6.54e-27!124;CL:0000037!1.23e-26!172;CL:0000566!1.23e-26!172;CL:0002032!9.24e-25!165;CL:0000837!9.24e-25!165;CL:0000988!8.86e-24!182;CL:0002393!3.10e-13!9;CL:0002397!3.10e-13!9;CL:0000094!1.46e-08!8;CL:0000840!2.54e-07!5;CL:0001029!2.54e-07!5|ontology_enrichment_celltype_v019=CL:0000576;1.71e-34;48!CL:0000473;2.11e-30;39!CL:0000234;2.11e-30;39!CL:0000766;4.67e-28;69!CL:0000860;8.29e-24;33!CL:0002057;8.29e-24;33!CL:0002393;2.07e-17;6!CL:0002397;2.07e-17;6!CL:0000235;5.33e-17;6!CL:0000094;9.57e-17;8!CL:0000763;2.29e-13;100!CL:0000081;7.17e-12;11!CL:0000875;2.80e-10;3!CL:0002396;2.80e-10;3!CL:0002619;4.30e-10;3!CL:0000738;5.32e-10;136!CL:0000775;1.23e-09;3!CL:0000767;7.96e-09;3!CL:0002087;2.93e-08;104|ontology_enrichment_celltype_v019_2=CL:0000766,7.40e-76,72;CL:0002194,8.31e-67,59;CL:0000576,8.31e-67,59;CL:0000040,8.31e-67,59;CL:0000559,8.31e-67,59;CL:0002009,2.74e-64,61;CL:0000473,1.34e-60,48;CL:0000234,1.34e-60,48;CL:0000839,1.19e-58,66;CL:0000557,1.27e-57,67;CL:0000763,1.28e-46,108;CL:0000049,1.28e-46,108;CL:0000860,2.86e-46,42;CL:0002057,2.86e-46,42;CL:0000738,5.40e-40,136;CL:0002087,1.36e-34,115;CL:0000037,5.93e-30,168;CL:0002031,3.98e-29,120;CL:0002032,1.10e-28,161;CL:0000837,1.10e-28,161;CL:0000988,8.75e-28,177;CL:0002393,4.42e-26,9;CL:0002397,4.42e-26,9;CL:0000235,4.05e-17,6;CL:0000094,8.52e-17,8;CL:0000081,6.60e-12,11;CL:0000875,2.85e-10,3;CL:0002396,2.85e-10,3;CL:0002619,4.19e-10,3;CL:0000775,1.04e-09,3;CL:0000767,9.02e-09,3;CL:0000134,8.51e-08,354;CL:0002320,2.00e-07,361|ontology_enrichment_development_v019=CL:0002057;6.16e-33;42!CL:0000049;2.07e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.16e-47!102;UBERON:0003061!5.16e-47!102;UBERON:0002193!1.69e-43!112;UBERON:0002371!8.72e-35!80;UBERON:0007023!6.85e-33!115;UBERON:0001474!4.91e-31!86;UBERON:0002405!1.99e-28!115;UBERON:0004765!1.08e-25!101;UBERON:0001434!1.08e-25!101;UBERON:0003081!5.15e-17!216;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0002204!5.46e-11!167|ontology_enrichment_uberon_v019=UBERON:0000178;8.57e-20;15!UBERON:0000179;8.57e-20;15!UBERON:0000463;8.57e-20;15!UBERON:0002390;5.05e-11;32!UBERON:0002193;6.89e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-68,98;UBERON:0003061,1.02e-68,98;UBERON:0002193,1.03e-63,108;UBERON:0002371,1.41e-49,76;UBERON:0002405,1.24e-45,93;UBERON:0001474,3.49e-45,82;UBERON:0004765,3.11e-40,90;UBERON:0001434,3.73e-35,100;UBERON:0003081,5.91e-29,203;UBERON:0000178,5.85e-20,15;UBERON:0000179,5.85e-20,15;UBERON:0000463,5.85e-20,15;UBERON:0002204,7.50e-17,167;UBERON:0000926,1.09e-14,315;UBERON:0004120,1.09e-14,315;UBERON:0006603,1.09e-14,315;UBERON:0002384,1.83e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.15148819429164,3.2511385896376,0,0,0,0,0,0,3.87796785972314,2.80762226458198,1.30206522429511,10.3001118150365,6.80176698639857,14.6818073551486,4.50734540216651,2.64513160582167,6.79235371325885,0.232429036905685,0.822335776043652,0.929119112685311,2.01384674625505,1.2808035326455,3.54723344832878,0.689491361473237,1.29096936716765,0,0.752969358170419,1.09162460023138,2.69668181334102,0.306083892370903,0,0.639337125799041,7.91643120448119,6.18337338627059,7.2458207590558,0,0,0,1.00499466102697,1.0429658368404,4.12658804939722,1.81619850790011,0.368277635987565,0.949387162322653,18.8017204817628,15.0949052975181,10.9022495664355,4.94245977044578,3.75442232103766,10.2864375486131,13.6806116995799,14.3220007583345,11.1425133796427,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,1.01207876807801,0,0,0,0.301150238155546,0,0,0.947109008176067,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.458426764241994,0,0,1.9472843619281,1.56716763569341,2.6591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3108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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |||
|TSSclassifier=S | |||
|UniProt=D6RFJ5 | |||
|association_with_transcript=0bp_to_ENST00000510188_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_7_at_FYB_5end | |||
|id=chr5:39274617..39274636,- | |||
|ontology_enrichment_celltype=CL:0000766!4.97e-48!76;CL:0002009!5.62e-44!65;CL:0002194!4.25e-42!63;CL:0000576!4.25e-42!63;CL:0000040!4.25e-42!63;CL:0000559!4.25e-42!63;CL:0000557!1.23e-41!71;CL:0000839!5.84e-39!70;CL:0002057!2.33e-36!42;CL:0000738!2.34e-34!140;CL:0000860!5.49e-33!45;CL:0000763!1.38e-32!112;CL:0000049!1.38e-32!112;CL:0002087!2.16e-28!119;CL:0002031!6.54e-27!124;CL:0000037!1.23e-26!172;CL:0000566!1.23e-26!172;CL:0002032!9.24e-25!165;CL:0000837!9.24e-25!165;CL:0000988!8.86e-24!182;CL:0002393!3.10e-13!9;CL:0002397!3.10e-13!9;CL:0000094!1.46e-08!8;CL:0000840!2.54e-07!5;CL:0001029!2.54e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.71e-34;48!CL:0000473;2.11e-30;39!CL:0000234;2.11e-30;39!CL:0000766;4.67e-28;69!CL:0000860;8.29e-24;33!CL:0002057;8.29e-24;33!CL:0002393;2.07e-17;6!CL:0002397;2.07e-17;6!CL:0000235;5.33e-17;6!CL:0000094;9.57e-17;8!CL:0000763;2.29e-13;100!CL:0000081;7.17e-12;11!CL:0000875;2.80e-10;3!CL:0002396;2.80e-10;3!CL:0002619;4.30e-10;3!CL:0000738;5.32e-10;136!CL:0000775;1.23e-09;3!CL:0000767;7.96e-09;3!CL:0002087;2.93e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.40e-76,72;CL:0002194,8.31e-67,59;CL:0000576,8.31e-67,59;CL:0000040,8.31e-67,59;CL:0000559,8.31e-67,59;CL:0002009,2.74e-64,61;CL:0000473,1.34e-60,48;CL:0000234,1.34e-60,48;CL:0000839,1.19e-58,66;CL:0000557,1.27e-57,67;CL:0000763,1.28e-46,108;CL:0000049,1.28e-46,108;CL:0000860,2.86e-46,42;CL:0002057,2.86e-46,42;CL:0000738,5.40e-40,136;CL:0002087,1.36e-34,115;CL:0000037,5.93e-30,168;CL:0002031,3.98e-29,120;CL:0002032,1.10e-28,161;CL:0000837,1.10e-28,161;CL:0000988,8.75e-28,177;CL:0002393,4.42e-26,9;CL:0002397,4.42e-26,9;CL:0000235,4.05e-17,6;CL:0000094,8.52e-17,8;CL:0000081,6.60e-12,11;CL:0000875,2.85e-10,3;CL:0002396,2.85e-10,3;CL:0002619,4.19e-10,3;CL:0000775,1.04e-09,3;CL:0000767,9.02e-09,3;CL:0000134,8.51e-08,354;CL:0002320,2.00e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.16e-33;42!CL:0000049;2.07e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.16e-47!102;UBERON:0003061!5.16e-47!102;UBERON:0002193!1.69e-43!112;UBERON:0002371!8.72e-35!80;UBERON:0007023!6.85e-33!115;UBERON:0001474!4.91e-31!86;UBERON:0002405!1.99e-28!115;UBERON:0004765!1.08e-25!101;UBERON:0001434!1.08e-25!101;UBERON:0003081!5.15e-17!216;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0002204!5.46e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.57e-20;15!UBERON:0000179;8.57e-20;15!UBERON:0000463;8.57e-20;15!UBERON:0002390;5.05e-11;32!UBERON:0002193;6.89e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-68,98;UBERON:0003061,1.02e-68,98;UBERON:0002193,1.03e-63,108;UBERON:0002371,1.41e-49,76;UBERON:0002405,1.24e-45,93;UBERON:0001474,3.49e-45,82;UBERON:0004765,3.11e-40,90;UBERON:0001434,3.73e-35,100;UBERON:0003081,5.91e-29,203;UBERON:0000178,5.85e-20,15;UBERON:0000179,5.85e-20,15;UBERON:0000463,5.85e-20,15;UBERON:0002204,7.50e-17,167;UBERON:0000926,1.09e-14,315;UBERON:0004120,1.09e-14,315;UBERON:0006603,1.09e-14,315;UBERON:0002384,1.83e-07,371 | |||
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|short_description=p7@FYB | |||
}} |
Revision as of 15:37, 13 September 2013
Short description: | p7@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_FYB_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000510188_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | D6RFJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-68 | 98 |
blood island | 1.02e-68 | 98 |
hemolymphoid system | 1.03e-63 | 108 |
bone marrow | 1.41e-49 | 76 |
immune system | 1.24e-45 | 93 |
bone element | 3.49e-45 | 82 |
skeletal element | 3.11e-40 | 90 |
skeletal system | 3.73e-35 | 100 |
lateral plate mesoderm | 5.91e-29 | 203 |
blood | 5.85e-20 | 15 |
haemolymphatic fluid | 5.85e-20 | 15 |
organism substance | 5.85e-20 | 15 |
musculoskeletal system | 7.50e-17 | 167 |
mesoderm | 1.09e-14 | 315 |
mesoderm-derived structure | 1.09e-14 | 315 |
presumptive mesoderm | 1.09e-14 | 315 |
connective tissue | 1.83e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.