FFCP PHASE1:Mm9::chr17:75578018..75578028,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268977|HGNC=|MCL_coexpression_id=230|UniProt=Q8CG19,B1B1E2|association_with_transcript=-121bp_to_ENSMUST00000112516,ENSMUST00000135447,NM_206958_5end|description=CAGE_peak_14_at_Ltbp1_5end|id=chr17:75578018..75578028,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.17e-38,3;CL:0000359,1.17e-38,3;CL:0002539,1.17e-38,3;CL:0000514,1.17e-38,3;CL:0000680,8.87e-20,6;CL:0000187,8.87e-20,6;CL:0000056,8.87e-20,6;CL:0000222,4.54e-17,7;CL:0000355,1.90e-13,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.64e-12!14;UBERON:0000117!2.64e-12!14;UBERON:0000171!2.64e-12!14;UBERON:0000170!2.64e-12!14;UBERON:0005597!2.64e-12!14;UBERON:0000118!2.64e-12!14;UBERON:0005153!9.05e-11!17;UBERON:0005178!2.82e-09!17;UBERON:0005181!2.82e-09!17;UBERON:0002224!2.82e-09!17;UBERON:0000915!2.82e-09!17;UBERON:0008947!2.82e-09!17;UBERON:0003258!2.82e-09!17;UBERON:0005157!4.84e-08!27;UBERON:0004535!5.86e-07!23;UBERON:0001009!5.86e-07!23;UBERON:0000055!7.54e-07!5;UBERON:0001981!7.54e-07!5;UBERON:0002049!7.54e-07!5;UBERON:0007500!7.54e-07!5;UBERON:0007798!7.54e-07!5;UBERON:0004537!7.54e-07!5;UBERON:0006965!7.54e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000947,9.34e-51,4;UBERON:0001637,9.34e-51,4;UBERON:0004573,9.34e-51,4;UBERON:0003509,9.34e-51,4;UBERON:0004571,9.34e-51,4;UBERON:0010191,9.34e-51,4;UBERON:0004572,9.34e-51,4;UBERON:0000055,9.17e-41,5;UBERON:0007500,9.17e-41,5;UBERON:0001981,9.17e-41,5;UBERON:0002049,9.17e-41,5;UBERON:0007798,9.17e-41,5;UBERON:0004537,9.17e-41,5;UBERON:0006965,9.17e-41,5;UBERON:0001135,1.17e-38,3;UBERON:0004237,1.17e-38,3;UBERON:0004695,1.17e-38,3;UBERON:0002111,1.17e-38,3;UBERON:0004178,1.17e-38,3;UBERON:0001134,1.90e-13,9;UBERON:0002036,1.90e-13,9;UBERON:0002385,1.90e-13,9;UBERON:0000486,1.90e-13,9;UBERON:0007503,1.90e-13,9;UBERON:0001015,1.90e-13,9;UBERON:0002329,1.90e-13,9;UBERON:0003082,1.90e-13,9;UBERON:0003059,1.90e-13,9;UBERON:0007282,1.90e-13,9;UBERON:0004290,1.90e-13,9;UBERON:0009618,1.90e-13,9;UBERON:0000383,3.56e-12,10;UBERON:0007524,3.92e-11,11;UBERON:0003077,3.92e-11,11;UBERON:0007285,3.92e-11,11;UBERON:0004535,2.66e-09,23;UBERON:0001009,2.66e-09,23|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,4.35920804243913,4.9557623083654,0,0,0,0.194429899074283,0,0,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,1.59059292611903,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,1.15302348256365,0.281105173679186,0,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,1.19021820443007,0.195133647857799,0.630540576424764,0.44292937929755,0.797273843287435,0.81931657357869,0.690739927463582,0.867894351489069,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,1.13552068166615,0,0,0.659880491890142,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0,0.674321731924103,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p14@Ltbp1}} | ||
|EntrezGene=268977 | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|UniProt=Q8CG19,B1B1E2 | |||
|association_with_transcript=-121bp_to_ENSMUST00000112516,ENSMUST00000135447,NM_206958_5end | |||
|description=CAGE_peak_14_at_Ltbp1_5end | |||
|id=chr17:75578018..75578028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.17e-38,3;CL:0000359,1.17e-38,3;CL:0002539,1.17e-38,3;CL:0000514,1.17e-38,3;CL:0000680,8.87e-20,6;CL:0000187,8.87e-20,6;CL:0000056,8.87e-20,6;CL:0000222,4.54e-17,7;CL:0000355,1.90e-13,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.64e-12!14;UBERON:0000117!2.64e-12!14;UBERON:0000171!2.64e-12!14;UBERON:0000170!2.64e-12!14;UBERON:0005597!2.64e-12!14;UBERON:0000118!2.64e-12!14;UBERON:0005153!9.05e-11!17;UBERON:0005178!2.82e-09!17;UBERON:0005181!2.82e-09!17;UBERON:0002224!2.82e-09!17;UBERON:0000915!2.82e-09!17;UBERON:0008947!2.82e-09!17;UBERON:0003258!2.82e-09!17;UBERON:0005157!4.84e-08!27;UBERON:0004535!5.86e-07!23;UBERON:0001009!5.86e-07!23;UBERON:0000055!7.54e-07!5;UBERON:0001981!7.54e-07!5;UBERON:0002049!7.54e-07!5;UBERON:0007500!7.54e-07!5;UBERON:0007798!7.54e-07!5;UBERON:0004537!7.54e-07!5;UBERON:0006965!7.54e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,9.34e-51,4;UBERON:0001637,9.34e-51,4;UBERON:0004573,9.34e-51,4;UBERON:0003509,9.34e-51,4;UBERON:0004571,9.34e-51,4;UBERON:0010191,9.34e-51,4;UBERON:0004572,9.34e-51,4;UBERON:0000055,9.17e-41,5;UBERON:0007500,9.17e-41,5;UBERON:0001981,9.17e-41,5;UBERON:0002049,9.17e-41,5;UBERON:0007798,9.17e-41,5;UBERON:0004537,9.17e-41,5;UBERON:0006965,9.17e-41,5;UBERON:0001135,1.17e-38,3;UBERON:0004237,1.17e-38,3;UBERON:0004695,1.17e-38,3;UBERON:0002111,1.17e-38,3;UBERON:0004178,1.17e-38,3;UBERON:0001134,1.90e-13,9;UBERON:0002036,1.90e-13,9;UBERON:0002385,1.90e-13,9;UBERON:0000486,1.90e-13,9;UBERON:0007503,1.90e-13,9;UBERON:0001015,1.90e-13,9;UBERON:0002329,1.90e-13,9;UBERON:0003082,1.90e-13,9;UBERON:0003059,1.90e-13,9;UBERON:0007282,1.90e-13,9;UBERON:0004290,1.90e-13,9;UBERON:0009618,1.90e-13,9;UBERON:0000383,3.56e-12,10;UBERON:0007524,3.92e-11,11;UBERON:0003077,3.92e-11,11;UBERON:0007285,3.92e-11,11;UBERON:0004535,2.66e-09,23;UBERON:0001009,2.66e-09,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28049181116963,4.35920804243913,4.9557623083654,0,0,0,0.194429899074283,0,0,0,0,0,0.771778308107841,0.573066879877513,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,1.59059292611903,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,1.15302348256365,0.281105173679186,0,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0.438599962275997,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,1.19021820443007,0.195133647857799,0.630540576424764,0.44292937929755,0.797273843287435,0.81931657357869,0.690739927463582,0.867894351489069,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,1.13552068166615,0,0,0.659880491890142,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0,0.674321731924103,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p14@Ltbp1 | |||
}} |
Revision as of 15:19, 13 September 2013
Short description: | p14@Ltbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Ltbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | -121bp_to_ENSMUST00000112516, ENSMUST00000135447, NM_206958_5end |
EntrezGene: | Ltbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.17e-38 | 3 |
vascular associated smooth muscle cell | 1.17e-38 | 3 |
aortic smooth muscle cell | 1.17e-38 | 3 |
smooth muscle myoblast | 1.17e-38 | 3 |
muscle precursor cell | 8.87e-20 | 6 |
muscle cell | 8.87e-20 | 6 |
myoblast | 8.87e-20 | 6 |
mesodermal cell | 4.54e-17 | 7 |
multi-potent skeletal muscle stem cell | 1.90e-13 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.