FFCP PHASE1:Hg19::chr5:180257951..180257966,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000501855_5end|coexpression_cluster_id=C392|description=CAGE_peak_1_at_ENST00000501855_5end|id=chr5:180257951..180257966,+|ontology_enrichment_celltype=CL:0000738!1.29e-35!140;CL:0002087!2.45e-34!119;CL:0002031!2.15e-32!124;CL:0002057!1.08e-27!42;CL:0000766!2.44e-26!76;CL:0000839!1.07e-25!70;CL:0002194!1.24e-25!63;CL:0000576!1.24e-25!63;CL:0000040!1.24e-25!63;CL:0000559!1.24e-25!63;CL:0000557!2.45e-25!71;CL:0000037!1.31e-24!172;CL:0000566!1.31e-24!172;CL:0002009!1.76e-24!65;CL:0002032!8.68e-24!165;CL:0000837!8.68e-24!165;CL:0000860!1.57e-23!45;CL:0000988!5.49e-23!182;CL:0000763!6.84e-15!112;CL:0000049!6.84e-15!112;CL:0000542!1.04e-08!53;CL:0000051!1.04e-08!53;CL:0000838!1.35e-08!52|ontology_enrichment_celltype_v019=CL:0000860;6.87e-30;33!CL:0002057;6.87e-30;33!CL:0000473;4.45e-28;39!CL:0000234;4.45e-28;39!CL:0000576;1.26e-25;48!CL:0000766;6.55e-20;69!CL:0002087;3.58e-13;104!CL:0000738;1.08e-10;136!CL:0000791;9.03e-09;18!CL:0000789;9.03e-09;18!CL:0002419;9.03e-09;18!CL:0000763;8.91e-08;100!CL:0000136;1.64e-07;13!CL:0000625;9.77e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-48,136;CL:0002087,5.06e-46,115;CL:0000473,6.43e-45,48;CL:0000234,6.43e-45,48;CL:0000766,1.42e-44,72;CL:0002031,1.17e-43,120;CL:0002194,3.46e-43,59;CL:0000576,3.46e-43,59;CL:0000040,3.46e-43,59;CL:0000559,3.46e-43,59;CL:0000557,1.03e-42,67;CL:0000839,1.91e-42,66;CL:0002009,5.57e-41,61;CL:0000860,1.19e-40,42;CL:0002057,1.19e-40,42;CL:0000037,2.22e-33,168;CL:0002032,2.16e-32,161;CL:0000837,2.16e-32,161;CL:0000988,2.45e-31,177;CL:0000763,2.62e-25,108;CL:0000049,2.62e-25,108;CL:0000791,2.51e-09,18;CL:0000789,2.51e-09,18;CL:0002420,2.51e-09,18;CL:0002419,2.51e-09,18;CL:0000790,2.51e-09,18;CL:0002393,3.96e-09,9;CL:0002397,3.96e-09,9;CL:0000838,2.20e-07,52;CL:0000542,4.40e-07,53;CL:0000051,4.40e-07,53;CL:0000134,4.62e-07,354;CL:0000625,5.18e-07,11|ontology_enrichment_development_v019=CL:0002057;3.05e-29;42!CL:0000790;9.03e-09;18!CL:0000049;8.63e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.12e-26!102;UBERON:0003061!3.12e-26!102;UBERON:0002371!1.94e-24!80;UBERON:0002193!4.59e-22!112;UBERON:0001474!2.13e-21!86;UBERON:0004765!4.07e-18!101;UBERON:0001434!4.07e-18!101;UBERON:0002405!1.08e-13!115;UBERON:0007023!3.63e-13!115;UBERON:0002204!7.30e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-38,76;UBERON:0002390,4.49e-37,98;UBERON:0003061,4.49e-37,98;UBERON:0001474,9.19e-34,82;UBERON:0002405,2.72e-32,93;UBERON:0002193,6.74e-32,108;UBERON:0004765,1.82e-30,90;UBERON:0001434,2.01e-26,100;UBERON:0003081,1.45e-10,203;UBERON:0002204,4.44e-09,167;UBERON:0007023,7.09e-08,114|phase1_expression=1.2717486548939,5.56661362116556,2.11431606143957,1.0007329835313,2.23480547213644,0,12.6649939084155,2.52687949370732,5.22371256399677,0.245733936501509,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0.458480434487708,0.57470412614962,0.944529375764151,5.11373559903575,2.30297638858328,4.18003532953405,0,0.30120591877825,0,0.774672005803016,0.142169232487422,1.46800219667424,4.43196326825502,2.80762226458198,3.25516306073778,12.9870975059156,18.1380452970629,13.6515050846119,10.03247847579,10.9584023669755,5.33684934613196,16.0376035464922,19.7360586250476,18.8920886246013,12.9461576544968,15.6258030982751,17.0267205519781,24.1321976515633,19.3645405075148,18.9597081232078,11.8592673911841,14.7369321031237,15.5059204267108,16.5285301880287,20.8603867599461,26.2128221577607,9.23583640522805,7.18069167437875,9.37694451171927,9.86711411337186,14.7520158419696,13.0792672289071,19.0948985595125,12.5155900420848,20.8501290916912,12.7133895553007,15.4676607114777,13.2914202725171,12.2528066060926,14.669696697588,11.740884148469,4.94245977044578,3.45406853535464,2.89306056054744,10.5454715184262,13.5263340495381,8.76787938070243,1.75996244461323,2.18455444504853,2.66852776159066,2.13365111283254,0.800791974072025,2.87376219977242,3.96626923670917,3.81621501814146,0.569212969109448,0.587237189370939,2.29363936875137,0,2.24203425192614,0.263384084775077,3.14735632182133,2.75107533924415,1.43921049299656,2.84217042164153,3.58514493296949,3.31413464014313,3.89653456815823,2.67385096524417,1.76763544484902,1.99380505125259,1.08321545506006,2.43373507478783,1.04047478047903,2.46656856905514,3.59255023121603,2.31842468588042,3.26230438956533,5.08327573370455,6.27213142829861,1.81294948316106,1.91610246800961,5.15441168223945,1.01207876807801,2.22995790026868,1.30216690771284,1.90090408889675,2.40920190524436,1.66382594500744,2.49861453104692,2.13099526839615,1.64225599384209,2.82249440514625,2.94184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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000501855_5end | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_1_at_ENST00000501855_5end | |||
|id=chr5:180257951..180257966,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.29e-35!140;CL:0002087!2.45e-34!119;CL:0002031!2.15e-32!124;CL:0002057!1.08e-27!42;CL:0000766!2.44e-26!76;CL:0000839!1.07e-25!70;CL:0002194!1.24e-25!63;CL:0000576!1.24e-25!63;CL:0000040!1.24e-25!63;CL:0000559!1.24e-25!63;CL:0000557!2.45e-25!71;CL:0000037!1.31e-24!172;CL:0000566!1.31e-24!172;CL:0002009!1.76e-24!65;CL:0002032!8.68e-24!165;CL:0000837!8.68e-24!165;CL:0000860!1.57e-23!45;CL:0000988!5.49e-23!182;CL:0000763!6.84e-15!112;CL:0000049!6.84e-15!112;CL:0000542!1.04e-08!53;CL:0000051!1.04e-08!53;CL:0000838!1.35e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.87e-30;33!CL:0002057;6.87e-30;33!CL:0000473;4.45e-28;39!CL:0000234;4.45e-28;39!CL:0000576;1.26e-25;48!CL:0000766;6.55e-20;69!CL:0002087;3.58e-13;104!CL:0000738;1.08e-10;136!CL:0000791;9.03e-09;18!CL:0000789;9.03e-09;18!CL:0002419;9.03e-09;18!CL:0000763;8.91e-08;100!CL:0000136;1.64e-07;13!CL:0000625;9.77e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-48,136;CL:0002087,5.06e-46,115;CL:0000473,6.43e-45,48;CL:0000234,6.43e-45,48;CL:0000766,1.42e-44,72;CL:0002031,1.17e-43,120;CL:0002194,3.46e-43,59;CL:0000576,3.46e-43,59;CL:0000040,3.46e-43,59;CL:0000559,3.46e-43,59;CL:0000557,1.03e-42,67;CL:0000839,1.91e-42,66;CL:0002009,5.57e-41,61;CL:0000860,1.19e-40,42;CL:0002057,1.19e-40,42;CL:0000037,2.22e-33,168;CL:0002032,2.16e-32,161;CL:0000837,2.16e-32,161;CL:0000988,2.45e-31,177;CL:0000763,2.62e-25,108;CL:0000049,2.62e-25,108;CL:0000791,2.51e-09,18;CL:0000789,2.51e-09,18;CL:0002420,2.51e-09,18;CL:0002419,2.51e-09,18;CL:0000790,2.51e-09,18;CL:0002393,3.96e-09,9;CL:0002397,3.96e-09,9;CL:0000838,2.20e-07,52;CL:0000542,4.40e-07,53;CL:0000051,4.40e-07,53;CL:0000134,4.62e-07,354;CL:0000625,5.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-29;42!CL:0000790;9.03e-09;18!CL:0000049;8.63e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.12e-26!102;UBERON:0003061!3.12e-26!102;UBERON:0002371!1.94e-24!80;UBERON:0002193!4.59e-22!112;UBERON:0001474!2.13e-21!86;UBERON:0004765!4.07e-18!101;UBERON:0001434!4.07e-18!101;UBERON:0002405!1.08e-13!115;UBERON:0007023!3.63e-13!115;UBERON:0002204!7.30e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-38,76;UBERON:0002390,4.49e-37,98;UBERON:0003061,4.49e-37,98;UBERON:0001474,9.19e-34,82;UBERON:0002405,2.72e-32,93;UBERON:0002193,6.74e-32,108;UBERON:0004765,1.82e-30,90;UBERON:0001434,2.01e-26,100;UBERON:0003081,1.45e-10,203;UBERON:0002204,4.44e-09,167;UBERON:0007023,7.09e-08,114 | |||
|phase1_expression=1.2717486548939,5.56661362116556,2.11431606143957,1.0007329835313,2.23480547213644,0,12.6649939084155,2.52687949370732,5.22371256399677,0.245733936501509,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0.458480434487708,0.57470412614962,0.944529375764151,5.11373559903575,2.30297638858328,4.18003532953405,0,0.30120591877825,0,0.774672005803016,0.142169232487422,1.46800219667424,4.43196326825502,2.80762226458198,3.25516306073778,12.9870975059156,18.1380452970629,13.6515050846119,10.03247847579,10.9584023669755,5.33684934613196,16.0376035464922,19.7360586250476,18.8920886246013,12.9461576544968,15.6258030982751,17.0267205519781,24.1321976515633,19.3645405075148,18.9597081232078,11.8592673911841,14.7369321031237,15.5059204267108,16.5285301880287,20.8603867599461,26.2128221577607,9.23583640522805,7.18069167437875,9.37694451171927,9.86711411337186,14.7520158419696,13.0792672289071,19.0948985595125,12.5155900420848,20.8501290916912,12.7133895553007,15.4676607114777,13.2914202725171,12.2528066060926,14.669696697588,11.740884148469,4.94245977044578,3.45406853535464,2.89306056054744,10.5454715184262,13.5263340495381,8.76787938070243,1.75996244461323,2.18455444504853,2.66852776159066,2.13365111283254,0.800791974072025,2.87376219977242,3.96626923670917,3.81621501814146,0.569212969109448,0.587237189370939,2.29363936875137,0,2.24203425192614,0.263384084775077,3.14735632182133,2.75107533924415,1.43921049299656,2.84217042164153,3.58514493296949,3.31413464014313,3.89653456815823,2.67385096524417,1.76763544484902,1.99380505125259,1.08321545506006,2.43373507478783,1.04047478047903,2.46656856905514,3.59255023121603,2.31842468588042,3.26230438956533,5.08327573370455,6.27213142829861,1.81294948316106,1.91610246800961,5.15441168223945,1.01207876807801,2.22995790026868,1.30216690771284,1.90090408889675,2.40920190524436,1.66382594500744,2.49861453104692,2.13099526839615,1.64225599384209,2.82249440514625,2.94184215361858,2.46201486600758,0,0.670700859703636,0.383587685530591,0.722878304769133,0,0.579386075843295,0,0.486634870302636,0,0.221729397462564,0,1.5062593682237,1.09288586487763,0.741568885568859,8.11368484136708,12.1890816109487,6.64789802594326,0.715471872916026,0.571994910780128,0.371457501329565,0.39752481473341,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0.112611480483322,1.53316637465883,0,0,1.31780417436063,0,0,0.993943903390637,0.25326102332916,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,0,0.368502951935304,0,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0.30648779579902,0.751190294532984,0,0.179389635688862,0,0.635795703478686,0.600182192168805,0,0.257640540045629,0.558350568994769,0.506328996723799,0.194874010322397,0,0.276149695926898,1.2931684545505,0.355009592516614,0.302256294682921,0.169560592310488,1.15956511897978,0.272746120590835,0.573609190778008,0.609868530647977,0.662648841607426,0.69716365721711,0.518305275076852,0.756962552626885,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0.737930631258681,0.343135620597051,0.219500570817251,0,0.100528972411631,0.0925884451585296,1.3032332212413,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.570762456703795,1.58040879591855,0.858486162094873,1.96973604869918,3.51006397708857,1.63494278517601,0,1.34385702559088,0.567100388969546,0.626909658919938,0,0.766765358330422,0,2.3773077183571,2.69526550203004,2.30591925467138,2.65109110195398,1.58744735730423,2.67391897890794,1.17217447210047,1.71072446022705,0.411309970813294,0.600686115687835,0.571652865261156,0,0,0.1466765716419,0.129271715757778,10.7296933755565,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,3.25572963234866,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.299918973546171,4.86495122564762,9.5428847372104,12.6500363689819,0.239624855491583,0,0,0.434343920002738,0.410952645100767,1.25342674267927,0.112085143993527,1.57624608161542,2.58753089831421,2.31017465303547,0,1.30139853857622,0,0.502548796003046,0.637938751653163,2.24702107184155,0,0.828831026872071,0.24538298343828,1.50051156317903,0,1.03985430765404,0.535286966391485,0.630809660135739,0,0,0,1.03473071292505,0,0,0.781952530212746,0.391602314925481,0.343143423810856,2.27444828735176,4.52999821719095,4.16237475433433,2.42502057157008,1.66435439510497,0.604780586659361,1.73675465473144,0.306923946576125,0.841980283299221,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.116210378459959,0.48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| |||
|short_description=p1@ENST00000501855 | |||
}} |
Revision as of 15:16, 13 September 2013
Short description: | p1@ENST00000501855 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000501855_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000501855_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-38 | 76 |
hematopoietic system | 4.49e-37 | 98 |
blood island | 4.49e-37 | 98 |
bone element | 9.19e-34 | 82 |
immune system | 2.72e-32 | 93 |
hemolymphoid system | 6.74e-32 | 108 |
skeletal element | 1.82e-30 | 90 |
skeletal system | 2.01e-26 | 100 |
lateral plate mesoderm | 1.45e-10 | 203 |
musculoskeletal system | 4.44e-09 | 167 |
adult organism | 7.09e-08 | 114 |
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